RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	YIG1	Q08956	461 aa		2.55	□□□□□ -2
TOP2	YNL088W	PUS9	Q12069	462 aa		2.55	□□□□□ -2
TOP2	YNL088W	ATG29	Q12092	213 aa		2.55	□□□□□ -2
TOP2	YNL088W	UBX3	Q12229	455 aa		2.55	□□□□□ -2
TOP2	YNL088W	CBP2	P03874	630 aa	Predicted RBP	2.54	□□□□□ -2
TOP2	YNL088W	PGM1	P33401	570 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	SMF1	P38925	575 aa		2.54	□□□□□ -2
TOP2	YNL088W	FIR1	P40020	876 aa		2.54	□□□□□ -2
TOP2	YNL088W	PFK26	P40433	827 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	TIM21	P53220	239 aa		2.54	□□□□□ -2
TOP2	YNL088W	BET4	Q00618	327 aa		2.54	□□□□□ -2
TOP2	YNL088W	RCN2	Q12044	265 aa		2.54	□□□□□ -2
TOP2	YNL088W	LEU9	Q12166	604 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	TIF6	Q12522	245 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	GAL4	P04386	881 aa		2.54	□□□□□ -2
TOP2	YNL088W	SSA3	P09435	649 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	ATP12	P22135	325 aa		2.54	□□□□□ -2
TOP2	YNL088W	CMK2	P22517	447 aa		2.54	□□□□□ -2
TOP2	YNL088W	MEI4	P29467	408 aa		2.54	□□□□□ -2
TOP2	YNL088W	CRM1	P30822	1084 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	SLX5	P32828	619 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	SSO1	P32867	290 aa		2.54	□□□□□ -2
TOP2	YNL088W	IRS4	P36115	615 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	SRO77	P38163	1010 aa		2.54	□□□□□ -2
TOP2	YNL088W	YHR045W	P38775	560 aa		2.54	□□□□□ -2
TOP2	YNL088W	THO1	P40040	218 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	PIG2	P40187	538 aa		2.54	□□□□□ -2
TOP2	YNL088W	PRM2	P40534	656 aa		2.54	□□□□□ -2
TOP2	YNL088W	CEP3	P40969	608 aa		2.54	□□□□□ -2
TOP2	YNL088W	APS3	P47064	194 aa		2.54	□□□□□ -2
TOP2	YNL088W	SLX9	P53251	210 aa	Predicted RBP	2.54	□□□□□ -2
TOP2	YNL088W	CWC2	Q12046	339 aa	Predicted RBP	2.54	□□□□□ -2
TOP2	YNL088W	GET4	Q12125	312 aa		2.54	□□□□□ -2
TOP2	YNL088W	RPS21B	Q3E754	87 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	RPL1A	P0CX43	217 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	RPL1B	P0CX44	217 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	CDC24	P11433	854 aa	Predicted RBP	2.54	□□□□□ -2
TOP2	YNL088W	CBS1	P14066	229 aa		2.54	□□□□□ -2
TOP2	YNL088W	ERG6	P25087	383 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	MRPL32	P25348	183 aa		2.54	□□□□□ -2
TOP2	YNL088W	CAP1	P28495	268 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	MDL2	P33311	773 aa		2.54	□□□□□ -2
TOP2	YNL088W	DUR3	P33413	735 aa		2.54	□□□□□ -2
TOP2	YNL088W	STE13	P33894	931 aa		2.54	□□□□□ -2
TOP2	YNL088W	PTK1	P36002	662 aa	Predicted RBP	2.54	□□□□□ -2
TOP2	YNL088W	MAL32	P38158	584 aa		2.54	□□□□□ -2
TOP2	YNL088W	SCS2	P40075	244 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	PNC1	P53184	216 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	COQ6	P53318	479 aa		2.54	□□□□□ -2
TOP2	YNL088W	MAL12	P53341	584 aa		2.54	□□□□□ -2
TOP2	YNL088W	IST1	P53843	298 aa	Predicted RBP	2.54	□□□□□ -2
TOP2	YNL088W	VAC7	P53950	1165 aa		2.54	□□□□□ -2
TOP2	YNL088W	REG1	Q00816	1014 aa		2.54	□□□□□ -2
TOP2	YNL088W	YSA1	Q01976	231 aa		2.54	□□□□□ -2
TOP2	YNL088W	ARG7	Q04728	441 aa		2.54	□□□□□ -2
TOP2	YNL088W	NOP12	Q08208	459 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	RIM20	Q12033	661 aa		2.54	□□□□□ -2
TOP2	YNL088W	HFI1	Q12060	488 aa		2.54	□□□□□ -2
TOP2	YNL088W	YPL066W	Q12194	479 aa		2.54	□□□□□ -2
TOP2	YNL088W	NOT5	Q12514	560 aa	Predicted RBP	2.54	□□□□□ -2
TOP2	YNL088W	MTR10	Q99189	972 aa		2.54	□□□□□ -2
TOP2	YNL088W	YPR089W	O13585	888 aa		2.54	□□□□□ -2
TOP2	YNL088W	DSF1	P0CX08	502 aa		2.54	□□□□□ -2
TOP2	YNL088W	YNR073C	P0CX09	502 aa		2.54	□□□□□ -2
TOP2	YNL088W	RPL19A	P0CX82	189 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	RPL19B	P0CX83	189 aa	Predicted RBP	2.54	□□□□□ -2
TOP2	YNL088W	ADH4	P10127	382 aa		2.54	□□□□□ -2
TOP2	YNL088W	SAM1	P10659	382 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	UBC6	P33296	250 aa	Predicted RBP	2.54	□□□□□ -2
TOP2	YNL088W	OAF3	P36023	863 aa		2.54	□□□□□ -2
TOP2	YNL088W	EAF5	P39995	279 aa		2.54	□□□□□ -2
TOP2	YNL088W	OTU1	P43558	301 aa		2.54	□□□□□ -2
TOP2	YNL088W	YNL181W	P53878	407 aa		2.54	□□□□□ -2
TOP2	YNL088W	PEX13	P80667	386 aa		2.54	□□□□□ -2
TOP2	YNL088W	TIF35	Q04067	274 aa	Known RBP	2.54	□□□□□ -2
TOP2	YNL088W	ROY1	Q04847	553 aa		2.54	□□□□□ -2
TOP2	YNL088W	YEH2	Q07950	538 aa		2.54	□□□□□ -2
TOP2	YNL088W	GNT1	Q12096	491 aa		2.54	□□□□□ -2
TOP2	YNL088W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.53	□□□□□ -2	not detected
TOP2	YNL088W	DED1	P06634	604 aa	Known RBP	2.53	□□□□□ -2
TOP2	YNL088W	GLN4	P13188	809 aa	Known RBP	2.53	□□□□□ -2
TOP2	YNL088W	RNR1	P21524	888 aa	Known RBP	2.53	□□□□□ -2
TOP2	YNL088W	VPS1	P21576	704 aa	Known RBP	2.53	□□□□□ -2
TOP2	YNL088W	VMA3	P25515	160 aa		2.53	□□□□□ -2
TOP2	YNL088W	LRG1	P35688	1017 aa		2.53	□□□□□ -2
TOP2	YNL088W	MCX1	P38323	520 aa	Predicted RBP	2.53	□□□□□ -2
TOP2	YNL088W	OSH3	P38713	996 aa	Known RBP	2.53	□□□□□ -2
TOP2	YNL088W	GIM4	P40005	111 aa	Known RBP	2.53	□□□□□ -2
TOP2	YNL088W	ZRG8	P40021	1076 aa		2.53	□□□□□ -2
TOP2	YNL088W	MPH1	P40562	993 aa		2.53	□□□□□ -2
TOP2	YNL088W	RGD2	P43556	714 aa		2.53	□□□□□ -2
TOP2	YNL088W	PTK2	P47116	818 aa	Known RBP	2.53	□□□□□ -2
TOP2	YNL088W	YGR111W	P53265	400 aa		2.53	□□□□□ -2
TOP2	YNL088W	BNA7	Q04066	261 aa		2.53	□□□□□ -2
TOP2	YNL088W	CUR1	Q06469	252 aa		2.53	□□□□□ -2
TOP2	YNL088W	ERF2	Q06551	359 aa		2.53	□□□□□ -2
TOP2	YNL088W	PIB1	Q06651	286 aa		2.53	□□□□□ -2
TOP2	YNL088W	CDC73	Q06697	393 aa		2.53	□□□□□ -2
TOP2	YNL088W	DCI1	Q08558	271 aa		2.53	□□□□□ -2
TOP2	YNL088W	YDR061W	Q12298	539 aa		2.53	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms