RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	DIA2	Q08496	732 aa	Predicted RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	APL4	Q12028	832 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	RRG1	Q12167	365 aa	Predicted RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	ADR1	P07248	1323 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	SIR3	P06701	978 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	FUS3	P16892	353 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	URA4	P20051	364 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	OSM1	P21375	501 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	URA7	P28274	579 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	HXT1	P32465	570 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	PAH1	P32567	862 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	CPR5	P35176	225 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	MRX3	P38172	270 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	GIP1	P38229	639 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	LNP1	P38878	278 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	OAF1	P39720	1047 aa	Predicted RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	GID8	P40208	455 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	YIL165C	P40446	119 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	ARF3	P40994	183 aa	RIP-Chip data	3.48	□□□□□ -1.85	not detected
PEX1	YKL197C	LOH1	P47055	219 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	NPY1	P53164	384 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	YGR054W	P53235	642 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	CWC25	P53854	179 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	YKR005C	Q02203	525 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	KAP120	Q02932	1032 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	RNY1	Q02933	434 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	GIM5	Q04493	163 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	FAR8	Q05040	523 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	OMS1	Q06668	471 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	FAL1	Q12099	399 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	PNS1	Q12412	539 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	GIS3	Q12418	502 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	FKS3	Q04952	1785 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	YPR089W	O13585	888 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	TCP1	P12612	559 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	MSS116	P15424	664 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	SEC62	P21825	274 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	SAN1	P22470	610 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	DBP2	P24783	546 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	RRP7	P25368	297 aa	Predicted RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	KCC4	P25389	1037 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	YCR016W	P25617	290 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	GDA1	P32621	518 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	PRP40	P33203	583 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	MYO3	P36006	1272 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	AMN1	P38285	549 aa	Predicted RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	HXT8	P40886	569 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	CCT7	P42943	550 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	GUP1	P53154	560 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	ARP7	Q12406	477 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	TIF6	Q12522	245 aa	Known RBP	3.48	□□□□□ -1.85
PEX1	YKL197C	YIL177C	P40434	1758 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	YJL225C	P40889	1758 aa		3.48	□□□□□ -1.85
PEX1	YKL197C	GCD2	P12754	651 aa	Predicted RBP	3.47	□□□□□ -1.85
PEX1	YKL197C	RPI1	P23250	407 aa	Known RBP	3.47	□□□□□ -1.85
PEX1	YKL197C	FPS1	P23900	669 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	PRD1	P25375	712 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	VMA6	P32366	345 aa	Known RBP	3.47	□□□□□ -1.85
PEX1	YKL197C	MEI5	P32489	222 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	PET309	P32522	965 aa	Predicted RBP	3.47	□□□□□ -1.85
PEX1	YKL197C	YBR071W	P38243	211 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	SRP72	P38688	640 aa	Known RBP	3.47	□□□□□ -1.85
PEX1	YKL197C	YER184C	P39961	794 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	PCL6	P40038	420 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	RGI2	P40188	164 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	SIP5	P40210	489 aa	Known RBP	3.47	□□□□□ -1.85
PEX1	YKL197C	QDR1	P40475	563 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	NCS6	P53088	359 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	MFM1	Q02783	413 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	RUB1	Q03919	77 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	UTP5	Q04177	643 aa	Known RBP	3.47	□□□□□ -1.85
PEX1	YKL197C	CIA1	Q05583	330 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	YDL114W	Q07530	308 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	TIP41	Q12199	356 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	OSW2	Q12202	724 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	RAD61	Q99359	647 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	PSK1	P31374	1356 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	VAS1	P07806	1104 aa	Known RBP	3.47	□□□□□ -1.85
PEX1	YKL197C	COX11	P19516	300 aa	Known RBP	3.47	□□□□□ -1.85
PEX1	YKL197C	TYR1	P20049	452 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	GYP6	P32806	458 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	TFA2	P36145	328 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	GPT2	P36148	743 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	YHL041W	P38730	149 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	GPP2	P40106	250 aa	Known RBP	3.47	□□□□□ -1.85
PEX1	YKL197C	NTA1	P40354	457 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	HFM1	P51979	1187 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	APC1	P53886	1748 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	TIM10	P87108	93 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	REC102	Q02721	264 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	SKI8	Q02793	397 aa	Predicted RBP	3.47	□□□□□ -1.85
PEX1	YKL197C	RSN1	Q03516	953 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	PSR2	Q07949	397 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	VAM3	Q12241	283 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	ARP6	Q12509	438 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	URB1	P34241	1764 aa	Known RBP	3.47	□□□□□ -1.85
PEX1	YKL197C	LAM4	P38800	1345 aa		3.47	□□□□□ -1.85
PEX1	YKL197C	CBP2	P03874	630 aa	Predicted RBP	3.46	□□□□□ -1.85
PEX1	YKL197C	HXK2	P04807	486 aa	Known RBP	3.46	□□□□□ -1.85
PEX1	YKL197C	ERR1	P0CX10	437 aa		3.46	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms