RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PDE6AP16499 860 aa20.27■□□□□ 0.84
PHGDH-234ENST00000642041 PPATQ06203 517 aa20.27■□□□□ 0.84
PHGDH-234ENST00000642041 TRDNQ13061 729 aa20.27■□□□□ 0.84
PHGDH-234ENST00000642041 RASEFQ8IZ41 740 aa20.27■□□□□ 0.84
PHGDH-234ENST00000642041 PAK6Q9NQU5 681 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-234ENST00000642041 SALL1Q9NSC2 1324 aa20.27■□□□□ 0.83
PHGDH-234ENST00000642041 PATL2C9JE40 543 aaKnown RBP20.26■□□□□ 0.83
PHGDH-234ENST00000642041 ZNF213O14771 459 aa20.26■□□□□ 0.83
PHGDH-234ENST00000642041 GPAA1O43292 621 aa20.26■□□□□ 0.83
PHGDH-234ENST00000642041 INHAP05111 366 aa20.26■□□□□ 0.83
PHGDH-234ENST00000642041 BCRP11274 1271 aa20.26■□□□□ 0.83
PHGDH-234ENST00000642041 PCP11498 1178 aaKnown RBP20.26■□□□□ 0.83
PHGDH-234ENST00000642041 RPS6KB1P23443 525 aa20.26■□□□□ 0.83
PHGDH-234ENST00000642041 MAGEA10P43363 369 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-234ENST00000642041 DHX32Q7L7V1 743 aaKnown RBP20.26■□□□□ 0.83
PHGDH-234ENST00000642041 PXYLP1Q8TE99 480 aa20.26■□□□□ 0.83
PHGDH-234ENST00000642041 OSBP2Q969R2 916 aa20.26■□□□□ 0.83
PHGDH-234ENST00000642041 MTA3Q9BTC8 594 aa20.26■□□□□ 0.83
PHGDH-234ENST00000642041 TTF2Q9UNY4 1162 aaKnown RBP20.26■□□□□ 0.83
PHGDH-234ENST00000642041 EYSQ5T1H1 3165 aa20.26■□□□□ 0.83
PHGDH-234ENST00000642041 PRUNE2Q8WUY3 3088 aa20.25■□□□□ 0.83
PHGDH-234ENST00000642041 MGAMO43451 1857 aa20.25■□□□□ 0.83
PHGDH-234ENST00000642041 GSTO1P78417 241 aa20.25■□□□□ 0.83
PHGDH-234ENST00000642041 FAM109BQ6ICB4 259 aaPredicted RBP20.25■□□□□ 0.83
PHGDH-234ENST00000642041 GIMAP6Q6P9H5 292 aa20.25■□□□□ 0.83
PHGDH-234ENST00000642041 SLF2Q8IX21 1173 aa20.25■□□□□ 0.83
PHGDH-234ENST00000642041 TDRD7Q8NHU6 1098 aaKnown RBP20.25■□□□□ 0.83
PHGDH-234ENST00000642041 KIF3AQ9Y496 699 aa20.25■□□□□ 0.83
PHGDH-234ENST00000642041 FAM205AQ6ZU69 1335 aa20.25■□□□□ 0.83
PHGDH-234ENST00000642041 ZNF532Q9HCE3 1301 aa20.25■□□□□ 0.83
PHGDH-234ENST00000642041 DDX11L8A8MPP1 907 aa20.24■□□□□ 0.83
PHGDH-234ENST00000642041 LDHCP07864 332 aa20.24■□□□□ 0.83
PHGDH-234ENST00000642041 ELNP15502 786 aa20.24■□□□□ 0.83
PHGDH-234ENST00000642041 CLEC17AQ6ZS10 378 aa20.24■□□□□ 0.83
PHGDH-234ENST00000642041 DIS3LQ8TF46 1054 aaKnown RBP20.24■□□□□ 0.83
PHGDH-234ENST00000642041 TBC1D22AQ8WUA7 517 aa20.24■□□□□ 0.83
PHGDH-234ENST00000642041 UPF3BQ9BZI7 483 aaKnown RBP20.24■□□□□ 0.83
PHGDH-234ENST00000642041 PIH1D3Q9NQM4 214 aaKnown RBP20.24■□□□□ 0.83
PHGDH-234ENST00000642041 DOCK2Q92608 1830 aa20.24■□□□□ 0.83
PHGDH-234ENST00000642041 CYP21A2P08686 494 aa20.23■□□□□ 0.83
PHGDH-234ENST00000642041 PDCP20941 246 aa20.23■□□□□ 0.83
PHGDH-234ENST00000642041 FLT3LGP49771 235 aa20.23■□□□□ 0.83
PHGDH-234ENST00000642041 RAB3GAP1Q15042 981 aa20.23■□□□□ 0.83
PHGDH-234ENST00000642041 MFSD14BQ5SR56 506 aa20.23■□□□□ 0.83
PHGDH-234ENST00000642041 PI16Q6UXB8 463 aa20.23■□□□□ 0.83
PHGDH-234ENST00000642041 ANKLE1Q8NAG6 615 aa20.23■□□□□ 0.83
PHGDH-234ENST00000642041 HOOK2Q96ED9 719 aa20.23■□□□□ 0.83
PHGDH-234ENST00000642041 GUCD1Q96NT3 240 aa20.23■□□□□ 0.83
PHGDH-234ENST00000642041 PARK7Q99497 189 aaKnown RBP20.23■□□□□ 0.83
PHGDH-234ENST00000642041 UBE2OQ9C0C9 1292 aaKnown RBP20.23■□□□□ 0.83
PHGDH-234ENST00000642041 CNNM2Q9H8M5 875 aa20.23■□□□□ 0.83
PHGDH-234ENST00000642041 IQSEC3Q9UPP2 1182 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-234ENST00000642041 KCNH4Q9UQ05 1017 aa20.23■□□□□ 0.83
PHGDH-234ENST00000642041 SUGT1Q9Y2Z0 365 aa20.23■□□□□ 0.83
PHGDH-234ENST00000642041 NDUFB9Q9Y6M9 179 aa20.23■□□□□ 0.83
PHGDH-234ENST00000642041 TCRBV5S4A2TA0A5A2 114 aa20.22■□□□□ 0.83
PHGDH-234ENST00000642041 POTEB2H3BUK9 544 aa20.22■□□□□ 0.83
PHGDH-234ENST00000642041 CD2BP2O95400 341 aaKnown RBP20.22■□□□□ 0.83
PHGDH-234ENST00000642041 SYN1P17600 705 aa20.22■□□□□ 0.83
PHGDH-234ENST00000642041 CRKP46108 304 aa20.22■□□□□ 0.83
PHGDH-234ENST00000642041 AK2P54819 239 aa20.22■□□□□ 0.83
PHGDH-234ENST00000642041 FGD1P98174 961 aa20.22■□□□□ 0.83
PHGDH-234ENST00000642041 IRF5Q13568 498 aa20.22■□□□□ 0.83
PHGDH-234ENST00000642041 NFKBIBQ15653 356 aa20.22■□□□□ 0.83
PHGDH-234ENST00000642041 MAGEB6Q8N7X4 407 aa20.22■□□□□ 0.83
PHGDH-234ENST00000642041 NCOA7Q8NI08 942 aa20.22■□□□□ 0.83
PHGDH-234ENST00000642041 STRBPQ96SI9 672 aaKnown RBP20.22■□□□□ 0.83
PHGDH-234ENST00000642041 SEC62Q99442 399 aaKnown RBP20.22■□□□□ 0.83
PHGDH-234ENST00000642041 RNF41Q9H4P4 317 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-234ENST00000642041 MAST2Q6P0Q8 1798 aa20.21■□□□□ 0.83
PHGDH-234ENST00000642041 CHAF1AQ13111 956 aaPredicted RBP20.21■□□□□ 0.83
PHGDH-234ENST00000642041 MOGSQ13724 837 aa20.21■□□□□ 0.83
PHGDH-234ENST00000642041 RGS22Q8NE09 1264 aa20.21■□□□□ 0.83
PHGDH-234ENST00000642041 PUS7LQ9H0K6 701 aaKnown RBP20.21■□□□□ 0.83
PHGDH-234ENST00000642041 RAI14Q9P0K7 980 aa20.21■□□□□ 0.83
PHGDH-234ENST00000642041 ATP6V1DQ9Y5K8 247 aa20.21■□□□□ 0.83
PHGDH-234ENST00000642041 M0R2C6 588 aa20.2■□□□□ 0.82
PHGDH-234ENST00000642041 FGAP02671 866 aa20.2■□□□□ 0.82
PHGDH-234ENST00000642041 MCM5P33992 734 aa20.2■□□□□ 0.82
PHGDH-234ENST00000642041 SKOR2Q2VWA4 1001 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-234ENST00000642041 DCAF15Q66K64 600 aa20.2■□□□□ 0.82
PHGDH-234ENST00000642041 RALYLQ86SE5 291 aaKnown RBP20.2■□□□□ 0.82
PHGDH-234ENST00000642041 DHX16O60231 1041 aaKnown RBP20.19■□□□□ 0.82
PHGDH-234ENST00000642041 APPP05067 770 aa20.19■□□□□ 0.82
PHGDH-234ENST00000642041 NAA16Q6N069 864 aaPredicted RBP20.19■□□□□ 0.82
PHGDH-234ENST00000642041 CCDC129Q6ZRS4 1044 aa20.19■□□□□ 0.82
PHGDH-234ENST00000642041 FAM83AQ86UY5 434 aa20.19■□□□□ 0.82
PHGDH-234ENST00000642041 LLPHQ9BRT6 129 aaKnown RBP20.19■□□□□ 0.82
PHGDH-234ENST00000642041 NOL10Q9BSC4 688 aaKnown RBP20.19■□□□□ 0.82
PHGDH-234ENST00000642041 AGXT2Q9BYV1 514 aa20.19■□□□□ 0.82
PHGDH-234ENST00000642041 KRT23Q9C075 422 aa20.19■□□□□ 0.82
PHGDH-234ENST00000642041 NBPF3Q9H094 633 aa20.19■□□□□ 0.82
PHGDH-234ENST00000642041 NAPBQ9H115 298 aa20.19■□□□□ 0.82
PHGDH-234ENST00000642041 MAGEB6P1A0A0J9YX57 407 aa20.18■□□□□ 0.82
PHGDH-234ENST00000642041 BAG3O95817 575 aa20.18■□□□□ 0.82
PHGDH-234ENST00000642041 COL9A1P20849 921 aa20.18■□□□□ 0.82
PHGDH-234ENST00000642041 CYP7A1P22680 504 aa20.18■□□□□ 0.82
PHGDH-234ENST00000642041 ADCK5Q3MIX3 580 aa20.18■□□□□ 0.82
PHGDH-234ENST00000642041 ZNF274Q96GC6 653 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-234ENST00000642041 ZNF341Q9BYN7 854 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms