RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 MAPK4P31152 587 aa12.23□□□□□ -0.45
PHGDH-222ENST00000641587 PPP4CP60510 307 aa12.23□□□□□ -0.45
PHGDH-222ENST00000641587 TNNI3KQ59H18 835 aa12.23□□□□□ -0.45
PHGDH-222ENST00000641587 GPR153Q6NV75 609 aa12.23□□□□□ -0.45
PHGDH-222ENST00000641587 PLEKHH3Q7Z736 793 aa12.23□□□□□ -0.45
PHGDH-222ENST00000641587 APBA2Q99767 749 aa12.23□□□□□ -0.45
PHGDH-222ENST00000641587 TRIM34Q9BYJ4 488 aa12.23□□□□□ -0.45
PHGDH-222ENST00000641587 TLR7Q9NYK1 1049 aaKnown RBP12.23□□□□□ -0.45
PHGDH-222ENST00000641587 STXBP5LQ9Y2K9 1186 aa12.23□□□□□ -0.45
PHGDH-222ENST00000641587 FPGT-TNNI3KV9GXZ4 949 aa12.23□□□□□ -0.45
PHGDH-222ENST00000641587 CUL9Q8IWT3 2517 aa12.22□□□□□ -0.45
PHGDH-222ENST00000641587 PLCG2P16885 1265 aa12.22□□□□□ -0.45
PHGDH-222ENST00000641587 RGS2P41220 211 aa12.22□□□□□ -0.45
PHGDH-222ENST00000641587 WDR78Q5VTH9 848 aa12.22□□□□□ -0.45
PHGDH-222ENST00000641587 FOXP4Q8IVH2 680 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-222ENST00000641587 CCAR1Q8IX12 1150 aaKnown RBP12.22□□□□□ -0.45
PHGDH-222ENST00000641587 MIGA1Q8NAN2 632 aa12.22□□□□□ -0.45
PHGDH-222ENST00000641587 CHMP4BQ9H444 224 aaKnown RBP12.22□□□□□ -0.45
PHGDH-222ENST00000641587 C1orf115Q9H7X2 142 aa12.22□□□□□ -0.45
PHGDH-222ENST00000641587 PRUNE2Q8WUY3 3088 aa12.22□□□□□ -0.45
PHGDH-222ENST00000641587 HLA-DOAP06340 250 aa12.21□□□□□ -0.45
PHGDH-222ENST00000641587 MAP2K5Q13163 448 aa12.21□□□□□ -0.45
PHGDH-222ENST00000641587 USP17L2Q6R6M4 530 aa12.21□□□□□ -0.45
PHGDH-222ENST00000641587 ACER1Q8TDN7 264 aa12.21□□□□□ -0.45
PHGDH-222ENST00000641587 FAM161BQ96MY7 647 aa12.21□□□□□ -0.45
PHGDH-222ENST00000641587 FEZ1Q99689 392 aa12.21□□□□□ -0.45
PHGDH-222ENST00000641587 SENP6Q9GZR1 1112 aaPredicted RBP12.21□□□□□ -0.45
PHGDH-222ENST00000641587 CWC22Q9HCG8 908 aaKnown RBP12.21□□□□□ -0.45
PHGDH-222ENST00000641587 LTBP2Q14767 1821 aa12.21□□□□□ -0.46
PHGDH-222ENST00000641587 CYP7A1P22680 504 aa12.2□□□□□ -0.46
PHGDH-222ENST00000641587 ATN1P54259 1190 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-222ENST00000641587 EVX2Q03828 476 aa12.2□□□□□ -0.46
PHGDH-222ENST00000641587 OS9Q13438 667 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-222ENST00000641587 POLA2Q14181 598 aa12.2□□□□□ -0.46
PHGDH-222ENST00000641587 RAB3GAP1Q15042 981 aa12.2□□□□□ -0.46
PHGDH-222ENST00000641587 CCDC158Q5M9N0 1113 aa12.2□□□□□ -0.46
PHGDH-222ENST00000641587 ERICH6BQ5W0A0 696 aa12.2□□□□□ -0.46
PHGDH-222ENST00000641587 TRMT44Q8IYL2 757 aaKnown RBP12.2□□□□□ -0.46
PHGDH-222ENST00000641587 NPLOC4Q8TAT6 608 aa12.2□□□□□ -0.46
PHGDH-222ENST00000641587 C12orf42Q96LP6 360 aa12.2□□□□□ -0.46
PHGDH-222ENST00000641587 GUCD1Q96NT3 240 aa12.2□□□□□ -0.46
PHGDH-222ENST00000641587 BTBD7Q9P203 1132 aa12.2□□□□□ -0.46
PHGDH-222ENST00000641587 DBNLQ9UJU6 430 aaKnown RBP12.2□□□□□ -0.46
PHGDH-222ENST00000641587 NAV1Q8NEY1 1877 aa12.19□□□□□ -0.46
PHGDH-222ENST00000641587 IDH1O75874 414 aaKnown RBP12.19□□□□□ -0.46
PHGDH-222ENST00000641587 VCAM1P19320 739 aa12.19□□□□□ -0.46
PHGDH-222ENST00000641587 CYP2C19P33261 490 aa12.19□□□□□ -0.46
PHGDH-222ENST00000641587 USP5P45974 858 aa12.19□□□□□ -0.46
PHGDH-222ENST00000641587 TATDN1Q6P1N9 297 aa12.19□□□□□ -0.46
PHGDH-222ENST00000641587 TRPV1Q8NER1 839 aa12.19□□□□□ -0.46
PHGDH-222ENST00000641587 GTF3C2Q8WUA4 911 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-222ENST00000641587 EDC3Q96F86 508 aaKnown RBP12.19□□□□□ -0.46
PHGDH-222ENST00000641587 CCDC8Q9H0W5 538 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-222ENST00000641587 ANTXR1Q9H6X2 564 aa12.19□□□□□ -0.46
PHGDH-222ENST00000641587 GPR108Q9NPR9 543 aa12.19□□□□□ -0.46
PHGDH-222ENST00000641587 GINM1Q9NU53 330 aa12.19□□□□□ -0.46
PHGDH-222ENST00000641587 RABGAP1Q9Y3P9 1069 aa12.19□□□□□ -0.46
PHGDH-222ENST00000641587 RLFQ13129 1914 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-222ENST00000641587 USP17L15C9J2P7 530 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 USP17L13C9JLJ4 530 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 USP17L11C9JVI0 530 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 USP17L18D6R9N7 530 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 USP17L22D6RA61 530 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 USP17L17D6RBQ6 530 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 USP17L19D6RCP7 530 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 USP17L20D6RJB6 530 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 SURF6O75683 361 aaKnown RBP12.18□□□□□ -0.46
PHGDH-222ENST00000641587 PTPREP23469 700 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 CNGA1P29973 690 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 USP17L24Q0WX57 530 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 MFSD14CQ5VZR4 134 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 ANO1Q5XXA6 986 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 CATSPERGQ6ZRH7 1159 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 MAGEB6Q8N7X4 407 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 SSH3Q8TE77 659 aa12.18□□□□□ -0.46
PHGDH-222ENST00000641587 COL25A1Q9BXS0 654 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-222ENST00000641587 RPAP3Q9H6T3 665 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-222ENST00000641587 DDX20Q9UHI6 824 aaKnown RBP12.18□□□□□ -0.46
PHGDH-222ENST00000641587 SLC15A5A6NIM6 579 aa12.17□□□□□ -0.46
PHGDH-222ENST00000641587 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
PHGDH-222ENST00000641587 GUCY1A2P33402 732 aa12.17□□□□□ -0.46
PHGDH-222ENST00000641587 SHMT1P34896 483 aa12.17□□□□□ -0.46
PHGDH-222ENST00000641587 PLCD1P51178 756 aa12.17□□□□□ -0.46
PHGDH-222ENST00000641587 RTP1P59025 263 aa12.17□□□□□ -0.46
PHGDH-222ENST00000641587 AAMPQ13685 434 aa12.17□□□□□ -0.46
PHGDH-222ENST00000641587 GRB14Q14449 540 aa12.17□□□□□ -0.46
PHGDH-222ENST00000641587 ABCB5Q2M3G0 1257 aa12.17□□□□□ -0.46
PHGDH-222ENST00000641587 GJC2Q5T442 439 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-222ENST00000641587 EAF2Q96CJ1 260 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-222ENST00000641587 ZNF512BQ96KM6 892 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-222ENST00000641587 KIAA1683Q9H0B3 1180 aa12.17□□□□□ -0.46
PHGDH-222ENST00000641587 PPP4R2Q9NY27 417 aa12.17□□□□□ -0.46
PHGDH-222ENST00000641587 SERPINB13Q9UIV8 391 aa12.17□□□□□ -0.46
PHGDH-222ENST00000641587 A0A0G2JMZ2 1700 aa12.17□□□□□ -0.46
PHGDH-222ENST00000641587 SPTBN5Q9NRC6 3674 aaKnown RBP12.16□□□□□ -0.46
PHGDH-222ENST00000641587 CYBAP13498 195 aa12.16□□□□□ -0.46
PHGDH-222ENST00000641587 CCNA1P78396 465 aa12.16□□□□□ -0.46
PHGDH-222ENST00000641587 ATP8B2P98198 1209 aa12.16□□□□□ -0.46
PHGDH-222ENST00000641587 ATP2B2Q01814 1243 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms