RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 NMT2O60551 498 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 SEC24BO95487 1268 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 MTMR2Q13614 643 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 ZYXQ15942 572 aaKnown RBP15.62■□□□□ 0.09
GTF3A-209ENST00000640289 CCL15Q16663 113 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 SIAH1Q8IUQ4 282 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 BRI3BPQ8WY22 251 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 TBC1D2Q9BYX2 928 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 PLIN4Q96Q06 1357 aa15.62■□□□□ 0.09
GTF3A-209ENST00000640289 A0A0G2JLL6 359 aaPredicted RBP15.61■□□□□ 0.09
GTF3A-209ENST00000640289 USP17L10C9JJH3 530 aa15.61■□□□□ 0.09
GTF3A-209ENST00000640289 KDM4AO75164 1064 aa15.61■□□□□ 0.09
GTF3A-209ENST00000640289 PCP11498 1178 aaKnown RBP15.61■□□□□ 0.09
GTF3A-209ENST00000640289 EEF2P13639 858 aaKnown RBP15.61■□□□□ 0.09
GTF3A-209ENST00000640289 HMGCS2P54868 508 aa15.61■□□□□ 0.09
GTF3A-209ENST00000640289 ATP2B2Q01814 1243 aa15.61■□□□□ 0.09
GTF3A-209ENST00000640289 MOGSQ13724 837 aa15.61■□□□□ 0.09
GTF3A-209ENST00000640289 PRRT2Q7Z6L0 340 aaPredicted RBP15.61■□□□□ 0.09
GTF3A-209ENST00000640289 ESR2Q92731 530 aa15.61■□□□□ 0.09
GTF3A-209ENST00000640289 CEP95Q96GE4 821 aa15.61■□□□□ 0.09
GTF3A-209ENST00000640289 PTPN18Q99952 460 aa15.61■□□□□ 0.09
GTF3A-209ENST00000640289 USP26Q9BXU7 913 aa15.61■□□□□ 0.09
GTF3A-209ENST00000640289 KANSL2Q9H9L4 492 aa15.61■□□□□ 0.09
GTF3A-209ENST00000640289 IL17RBQ9NRM6 502 aa15.61■□□□□ 0.09
GTF3A-209ENST00000640289 LAMA4Q16363 1823 aa15.61■□□□□ 0.09
GTF3A-209ENST00000640289 THSD7BQ9C0I4 1608 aa15.61■□□□□ 0.09
GTF3A-209ENST00000640289 PHIPQ8WWQ0 1821 aa15.6■□□□□ 0.09
GTF3A-209ENST00000640289 TESPA1A2RU30 521 aaPredicted RBP15.6■□□□□ 0.09
GTF3A-209ENST00000640289 IGF2BP3O00425 579 aaKnown RBP eCLIP15.6■□□□□ 0.09
GTF3A-209ENST00000640289 CETPP11597 493 aa15.6■□□□□ 0.09
GTF3A-209ENST00000640289 TM4SF4P48230 202 aa15.6■□□□□ 0.09
GTF3A-209ENST00000640289 BACE1P56817 501 aa15.6■□□□□ 0.09
GTF3A-209ENST00000640289 SREBF2Q12772 1141 aa15.6■□□□□ 0.09
GTF3A-209ENST00000640289 COL9A3Q14050 684 aaPredicted RBP15.6■□□□□ 0.09
GTF3A-209ENST00000640289 GADL1Q6ZQY3 521 aa15.6■□□□□ 0.09
GTF3A-209ENST00000640289 RASEFQ8IZ41 740 aa15.6■□□□□ 0.09
GTF3A-209ENST00000640289 FEZ1Q99689 392 aa15.6■□□□□ 0.09
GTF3A-209ENST00000640289 ZKSCAN3Q9BRR0 538 aa15.6■□□□□ 0.09
GTF3A-209ENST00000640289 KRT23Q9C075 422 aa15.6■□□□□ 0.09
GTF3A-209ENST00000640289 MTMR4Q9NYA4 1195 aa15.6■□□□□ 0.09
GTF3A-209ENST00000640289 BTBD19C9JJ37 291 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 HSPA4P34932 840 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 SH3D19Q5HYK7 790 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 RNF20Q5VTR2 975 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 CYB5R4Q7L1T6 521 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 IFNL1Q8IU54 200 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 FAM43AQ8N2R8 423 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 JMYQ8N9B5 988 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 CNNM2Q9H8M5 875 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 ARHGEF10LQ9HCE6 1279 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 EMILIN3Q9NT22 766 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 ZSWIM5Q9P217 1185 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 NYAP2Q9P242 653 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 CLIP2Q9UDT6 1046 aa15.59■□□□□ 0.09
GTF3A-209ENST00000640289 GREB1LQ9C091 1923 aaPredicted RBP15.58■□□□□ 0.09
GTF3A-209ENST00000640289 C19orf81C9J6K1 198 aa15.58■□□□□ 0.08
GTF3A-209ENST00000640289 INHBEP58166 350 aa15.58■□□□□ 0.08
GTF3A-209ENST00000640289 TRDNQ13061 729 aa15.58■□□□□ 0.08
GTF3A-209ENST00000640289 ADCK5Q3MIX3 580 aa15.58■□□□□ 0.08
GTF3A-209ENST00000640289 KIAA1755Q5JYT7 1200 aa15.58■□□□□ 0.08
GTF3A-209ENST00000640289 TREML2Q5T2D2 321 aa15.58■□□□□ 0.08
GTF3A-209ENST00000640289 GPAT2Q6NUI2 795 aa15.58■□□□□ 0.08
GTF3A-209ENST00000640289 RALYLQ86SE5 291 aaKnown RBP15.58■□□□□ 0.08
GTF3A-209ENST00000640289 NCOA7Q8NI08 942 aa15.58■□□□□ 0.08
GTF3A-209ENST00000640289 KIAA1683Q9H0B3 1180 aa15.58■□□□□ 0.08
GTF3A-209ENST00000640289 STX8Q9UNK0 236 aa15.58■□□□□ 0.08
GTF3A-209ENST00000640289 TMX2Q9Y320 296 aa15.58■□□□□ 0.08
GTF3A-209ENST00000640289 MYH8P13535 1937 aa15.58■□□□□ 0.08
GTF3A-209ENST00000640289 EPB41L2O43491 1005 aaKnown RBP15.57■□□□□ 0.08
GTF3A-209ENST00000640289 TTLL1O95922 423 aa15.57■□□□□ 0.08
GTF3A-209ENST00000640289 USP17L2Q6R6M4 530 aa15.57■□□□□ 0.08
GTF3A-209ENST00000640289 FASTKD5Q7L8L6 764 aaKnown RBP15.57■□□□□ 0.08
GTF3A-209ENST00000640289 CHST3Q7LGC8 479 aa15.57■□□□□ 0.08
GTF3A-209ENST00000640289 MB21D2Q8IYB1 491 aaPredicted RBP15.57■□□□□ 0.08
GTF3A-209ENST00000640289 REM2Q8IYK8 340 aaPredicted RBP15.57■□□□□ 0.08
GTF3A-209ENST00000640289 LRRC47Q8N1G4 583 aaKnown RBP15.57■□□□□ 0.08
GTF3A-209ENST00000640289 KCNB2Q92953 911 aa15.57■□□□□ 0.08
GTF3A-209ENST00000640289 TCP11L1Q9NUJ3 509 aa15.57■□□□□ 0.08
GTF3A-209ENST00000640289 TMOD4Q9NZQ9 345 aa15.57■□□□□ 0.08
GTF3A-209ENST00000640289 SNX14Q9Y5W7 946 aa15.57■□□□□ 0.08
GTF3A-209ENST00000640289 RAD21O60216 631 aa15.56■□□□□ 0.08
GTF3A-209ENST00000640289 ZKSCAN1P17029 563 aaPredicted RBP15.56■□□□□ 0.08
GTF3A-209ENST00000640289 USP14P54578 494 aa15.56■□□□□ 0.08
GTF3A-209ENST00000640289 ANTXR2P58335 489 aa15.56■□□□□ 0.08
GTF3A-209ENST00000640289 MAP2K1Q02750 393 aaPredicted RBP15.56■□□□□ 0.08
GTF3A-209ENST00000640289 TSGA10IPQ3SY00 556 aa15.56■□□□□ 0.08
GTF3A-209ENST00000640289 RCSD1Q6JBY9 416 aa15.56■□□□□ 0.08
GTF3A-209ENST00000640289 ANKRD23Q86SG2 305 aa15.56■□□□□ 0.08
GTF3A-209ENST00000640289 SPICE1Q8N0Z3 855 aa15.56■□□□□ 0.08
GTF3A-209ENST00000640289 PROCA1Q8NCQ7 364 aaPredicted RBP15.56■□□□□ 0.08
GTF3A-209ENST00000640289 C12orf42Q96LP6 360 aa15.56■□□□□ 0.08
GTF3A-209ENST00000640289 VCPKMTQ9H867 229 aa15.56■□□□□ 0.08
GTF3A-209ENST00000640289 WBP1LQ9NX94 342 aa15.56■□□□□ 0.08
GTF3A-209ENST00000640289 RNF186Q9NXI6 227 aa15.56■□□□□ 0.08
GTF3A-209ENST00000640289 AGTPBP1Q9UPW5 1226 aa15.56■□□□□ 0.08
GTF3A-209ENST00000640289 TNKSO95271 1327 aa15.55■□□□□ 0.08
GTF3A-209ENST00000640289 PDHXO00330 501 aa15.55■□□□□ 0.08
GTF3A-209ENST00000640289 TRPA1O75762 1119 aa15.55■□□□□ 0.08
GTF3A-209ENST00000640289 VCAM1P19320 739 aa15.55■□□□□ 0.08
GTF3A-209ENST00000640289 NOVP48745 357 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms