RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 ASB2Q96Q27 587 aa16.84■□□□□ 0.29
HLA-C-210ENST00000640219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.84■□□□□ 0.29
HLA-C-210ENST00000640219 MAP4K4O95819 1239 aaPredicted RBP16.83■□□□□ 0.28
HLA-C-210ENST00000640219 PTPREP23469 700 aa16.83■□□□□ 0.28
HLA-C-210ENST00000640219 DNAJB2P25686 324 aa16.83■□□□□ 0.28
HLA-C-210ENST00000640219 CCNA1P78396 465 aa16.83■□□□□ 0.28
HLA-C-210ENST00000640219 RLFQ13129 1914 aa16.83■□□□□ 0.28
HLA-C-210ENST00000640219 SNX17Q15036 470 aa16.83■□□□□ 0.28
HLA-C-210ENST00000640219 ERICH6Q7L0X2 663 aa16.83■□□□□ 0.28
HLA-C-210ENST00000640219 ITPRIPQ8IWB1 547 aa16.83■□□□□ 0.28
HLA-C-210ENST00000640219 TRPV1Q8NER1 839 aa16.83■□□□□ 0.28
HLA-C-210ENST00000640219 RABGAP1Q9Y3P9 1069 aa16.83■□□□□ 0.28
HLA-C-210ENST00000640219 PDS5AQ29RF7 1337 aaKnown RBP16.82■□□□□ 0.28
HLA-C-210ENST00000640219 PNMA6EA0A0J9YXQ4 647 aa16.82■□□□□ 0.28
HLA-C-210ENST00000640219 CIAO1O76071 339 aa16.82■□□□□ 0.28
HLA-C-210ENST00000640219 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
HLA-C-210ENST00000640219 ADORA1P30542 326 aa16.82■□□□□ 0.28
HLA-C-210ENST00000640219 JAG1P78504 1218 aa16.82■□□□□ 0.28
HLA-C-210ENST00000640219 FTSJ3Q8IY81 847 aaKnown RBP16.82■□□□□ 0.28
HLA-C-210ENST00000640219 NPLOC4Q8TAT6 608 aa16.82■□□□□ 0.28
HLA-C-210ENST00000640219 UHRF1Q96T88 793 aaPredicted RBP16.82■□□□□ 0.28
HLA-C-210ENST00000640219 ZNF576Q9H609 170 aa16.82■□□□□ 0.28
HLA-C-210ENST00000640219 THEGQ9P2T0 379 aa16.82■□□□□ 0.28
HLA-C-210ENST00000640219 PI4KBQ9UBF8 816 aa16.82■□□□□ 0.28
HLA-C-210ENST00000640219 FBXO3Q9UK99 471 aa16.82■□□□□ 0.28
HLA-C-210ENST00000640219 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.81■□□□□ 0.28
HLA-C-210ENST00000640219 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.81■□□□□ 0.28
HLA-C-210ENST00000640219 SRGAP3O43295 1099 aa16.81■□□□□ 0.28
HLA-C-210ENST00000640219 CNMDO75829 334 aa16.81■□□□□ 0.28
HLA-C-210ENST00000640219 LDHCP07864 332 aa16.81■□□□□ 0.28
HLA-C-210ENST00000640219 GNAI3P08754 354 aa16.81■□□□□ 0.28
HLA-C-210ENST00000640219 HOXC6P09630 235 aa16.81■□□□□ 0.28
HLA-C-210ENST00000640219 CYBAP13498 195 aa16.81■□□□□ 0.28
HLA-C-210ENST00000640219 ADCYAP1R1P41586 468 aa16.81■□□□□ 0.28
HLA-C-210ENST00000640219 EPHB4P54760 987 aa16.81■□□□□ 0.28
HLA-C-210ENST00000640219 ANO1Q5XXA6 986 aa16.81■□□□□ 0.28
HLA-C-210ENST00000640219 ZNF384Q8TF68 577 aa16.81■□□□□ 0.28
HLA-C-210ENST00000640219 GAS2L1Q99501 681 aaPredicted RBP16.81■□□□□ 0.28
HLA-C-210ENST00000640219 TACC3Q9Y6A5 838 aa16.81■□□□□ 0.28
HLA-C-210ENST00000640219 IVNS1ABPQ9Y6Y0 642 aa16.81■□□□□ 0.28
HLA-C-210ENST00000640219 ITGB8P26012 769 aa16.8■□□□□ 0.28
HLA-C-210ENST00000640219 GSTO1P78417 241 aa16.8■□□□□ 0.28
HLA-C-210ENST00000640219 MRPS5P82675 430 aaKnown RBP16.8■□□□□ 0.28
HLA-C-210ENST00000640219 TLE2Q04725 743 aa16.8■□□□□ 0.28
HLA-C-210ENST00000640219 USP17L2Q6R6M4 530 aa16.8■□□□□ 0.28
HLA-C-210ENST00000640219 TEX11Q8IYF3 940 aa16.8■□□□□ 0.28
HLA-C-210ENST00000640219 FERMT2Q96AC1 680 aa16.8■□□□□ 0.28
HLA-C-210ENST00000640219 ANP32EQ9BTT0 268 aa16.8■□□□□ 0.28
HLA-C-210ENST00000640219 EMILIN3Q9NT22 766 aa16.8■□□□□ 0.28
HLA-C-210ENST00000640219 GNAI2P04899 355 aa16.79■□□□□ 0.28
HLA-C-210ENST00000640219 GRB14Q14449 540 aa16.79■□□□□ 0.28
HLA-C-210ENST00000640219 SHROOM1Q2M3G4 852 aaPredicted RBP16.79■□□□□ 0.28
HLA-C-210ENST00000640219 C20orf194Q5TEA3 1177 aa16.79■□□□□ 0.28
HLA-C-210ENST00000640219 C1orf53Q5VUE5 145 aa16.79■□□□□ 0.28
HLA-C-210ENST00000640219 B4GALNT3Q6L9W6 998 aa16.79■□□□□ 0.28
HLA-C-210ENST00000640219 IL27Q8NEV9 243 aa16.79■□□□□ 0.28
HLA-C-210ENST00000640219 TIFAQ96CG3 184 aa16.79■□□□□ 0.28
HLA-C-210ENST00000640219 DHX36Q9H2U1 1008 aaKnown RBP16.79■□□□□ 0.28
HLA-C-210ENST00000640219 GINM1Q9NU53 330 aa16.79■□□□□ 0.28
HLA-C-210ENST00000640219 GDF11O95390 407 aa16.78■□□□□ 0.28
HLA-C-210ENST00000640219 RAG1P15918 1043 aa16.78■□□□□ 0.28
HLA-C-210ENST00000640219 IL15P40933 162 aaPredicted RBP16.78■□□□□ 0.28
HLA-C-210ENST00000640219 TIMM10P62072 90 aa16.78■□□□□ 0.28
HLA-C-210ENST00000640219 AKNAD1Q5T1N1 836 aa16.78■□□□□ 0.28
HLA-C-210ENST00000640219 NSUN4Q96CB9 384 aaKnown RBP16.78■□□□□ 0.28
HLA-C-210ENST00000640219 CCDC136Q96JN2 1154 aa16.78■□□□□ 0.28
HLA-C-210ENST00000640219 RCAN3Q9UKA8 241 aa16.78■□□□□ 0.28
HLA-C-210ENST00000640219 ZBTB21Q9ULJ3 1066 aa16.78■□□□□ 0.28
HLA-C-210ENST00000640219 USP17L15C9J2P7 530 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 USP17L13C9JLJ4 530 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 USP17L11C9JVI0 530 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 USP17L18D6R9N7 530 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 USP17L22D6RA61 530 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 USP17L17D6RBQ6 530 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 USP17L19D6RCP7 530 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 USP17L20D6RJB6 530 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 SEPT4O43236 478 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 IGHA2P01877 340 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 CLTBP09497 229 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 FPGSQ05932 587 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 USP17L24Q0WX57 530 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 LRRC41Q15345 812 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 DPP9Q86TI2 863 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 CRACR2BQ8N4Y2 399 aaPredicted RBP16.77■□□□□ 0.28
HLA-C-210ENST00000640219 C1QTNF1Q9BXJ1 281 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 TRIM34Q9BYJ4 488 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 DNAJC18Q9H819 358 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 COPRSQ9NQ92 184 aa16.77■□□□□ 0.28
HLA-C-210ENST00000640219 TFCP2Q12800 502 aa16.76■□□□□ 0.27
HLA-C-210ENST00000640219 OLFML2BQ68BL8 750 aa16.76■□□□□ 0.27
HLA-C-210ENST00000640219 FOXP4Q8IVH2 680 aaPredicted RBP16.76■□□□□ 0.27
HLA-C-210ENST00000640219 SH3RF3Q8TEJ3 882 aaPredicted RBP16.76■□□□□ 0.27
HLA-C-210ENST00000640219 PRDM12Q9H4Q4 367 aa16.76■□□□□ 0.27
HLA-C-210ENST00000640219 BTBD7Q9P203 1132 aa16.76■□□□□ 0.27
HLA-C-210ENST00000640219 COG6Q9Y2V7 657 aa16.76■□□□□ 0.27
HLA-C-210ENST00000640219 KIAA0355O15063 1070 aa16.75■□□□□ 0.27
HLA-C-210ENST00000640219 MTX1Q13505 466 aa16.75■□□□□ 0.27
HLA-C-210ENST00000640219 CCDC85BQ15834 202 aaPredicted RBP16.75■□□□□ 0.27
HLA-C-210ENST00000640219 ZYXQ15942 572 aaKnown RBP16.75■□□□□ 0.27
HLA-C-210ENST00000640219 CATSPERGQ6ZRH7 1159 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms