RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 MIPEPQ99797 713 aa9.47□□□□□ -0.89
FAM49B-230ENST00000639004 LNPKQ9C0E8 428 aa9.47□□□□□ -0.89
FAM49B-230ENST00000639004 STOML1Q9UBI4 398 aa9.47□□□□□ -0.89
FAM49B-230ENST00000639004 R3HCC1Q9Y3T6 440 aaKnown RBP9.47□□□□□ -0.89
FAM49B-230ENST00000639004 CCNFP41002 786 aa9.46□□□□□ -0.9
FAM49B-230ENST00000639004 LETMD1Q6P1Q0 360 aa9.46□□□□□ -0.9
FAM49B-230ENST00000639004 TOP6BLQ8N6T0 577 aa9.46□□□□□ -0.9
FAM49B-230ENST00000639004 DNAJB8Q8NHS0 232 aa9.46□□□□□ -0.9
FAM49B-230ENST00000639004 RIN3Q8TB24 985 aa9.46□□□□□ -0.9
FAM49B-230ENST00000639004 LTBP3Q9NS15 1303 aa9.46□□□□□ -0.9
FAM49B-230ENST00000639004 PROCP04070 461 aa9.45□□□□□ -0.9
FAM49B-230ENST00000639004 GBP1P32455 592 aa9.45□□□□□ -0.9
FAM49B-230ENST00000639004 ADMP35318 185 aa9.45□□□□□ -0.9
FAM49B-230ENST00000639004 SERINC3Q13530 473 aa9.45□□□□□ -0.9
FAM49B-230ENST00000639004 DOC2BQ14184 412 aa9.45□□□□□ -0.9
FAM49B-230ENST00000639004 DPH6Q7L8W6 267 aa9.45□□□□□ -0.9
FAM49B-230ENST00000639004 CELF2-AS1Q8N7Q2 184 aa9.45□□□□□ -0.9
FAM49B-230ENST00000639004 DUSP23Q9BVJ7 150 aa9.45□□□□□ -0.9
FAM49B-230ENST00000639004 TRIM55Q9BYV6 548 aa9.45□□□□□ -0.9
FAM49B-230ENST00000639004 SLC12A7Q9Y666 1083 aa9.45□□□□□ -0.9
FAM49B-230ENST00000639004 LEFTY1O75610 366 aa9.44□□□□□ -0.9
FAM49B-230ENST00000639004 LARP1BQ659C4 914 aaKnown RBP9.44□□□□□ -0.9
FAM49B-230ENST00000639004 ZAR1Q86SH2 424 aa9.44□□□□□ -0.9
FAM49B-230ENST00000639004 TMEM192Q8IY95 271 aa9.44□□□□□ -0.9
FAM49B-230ENST00000639004 TBC1D32Q96NH3 1257 aa9.44□□□□□ -0.9
FAM49B-230ENST00000639004 CEP131Q9UPN4 1083 aa9.44□□□□□ -0.9
FAM49B-230ENST00000639004 COL17A1Q9UMD9 1497 aaPredicted RBP9.43□□□□□ -0.9
FAM49B-230ENST00000639004 EOMESO95936 686 aa9.43□□□□□ -0.9
FAM49B-230ENST00000639004 FAM87AP0C7U9 286 aa9.43□□□□□ -0.9
FAM49B-230ENST00000639004 CDH24Q86UP0 819 aa9.43□□□□□ -0.9
FAM49B-230ENST00000639004 SHISA5Q8N114 240 aa9.43□□□□□ -0.9
FAM49B-230ENST00000639004 GIMAP7Q8NHV1 300 aa9.43□□□□□ -0.9
FAM49B-230ENST00000639004 SLC6A18Q96N87 628 aa9.43□□□□□ -0.9
FAM49B-230ENST00000639004 SPOCK3Q9BQ16 436 aa9.43□□□□□ -0.9
FAM49B-230ENST00000639004 OSBPL2Q9H1P3 480 aa9.43□□□□□ -0.9
FAM49B-230ENST00000639004 H2AFB1P0C5Y9 115 aa9.42□□□□□ -0.9
FAM49B-230ENST00000639004 H2AFB2P0C5Z0 115 aa9.42□□□□□ -0.9
FAM49B-230ENST00000639004 FXNQ16595 210 aa9.42□□□□□ -0.9
FAM49B-230ENST00000639004 RNF43Q68DV7 783 aa9.42□□□□□ -0.9
FAM49B-230ENST00000639004 MICAL1Q8TDZ2 1067 aa9.42□□□□□ -0.9
FAM49B-230ENST00000639004 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.42□□□□□ -0.9
FAM49B-230ENST00000639004 PHAXQ9H814 394 aaKnown RBP9.42□□□□□ -0.9
FAM49B-230ENST00000639004 SIRPGQ9P1W8 387 aa9.42□□□□□ -0.9
FAM49B-230ENST00000639004 DDR2Q16832 855 aa9.41□□□□□ -0.9
FAM49B-230ENST00000639004 CCDC144BQ3MJ40 725 aa9.41□□□□□ -0.9
FAM49B-230ENST00000639004 OGFOD3Q6PK18 319 aa9.41□□□□□ -0.9
FAM49B-230ENST00000639004 MFSD14AQ96MC6 490 aa9.41□□□□□ -0.9
FAM49B-230ENST00000639004 ST7Q9NRC1 585 aa9.41□□□□□ -0.9
FAM49B-230ENST00000639004 ZNF214Q9UL59 606 aaPredicted RBP9.41□□□□□ -0.9
FAM49B-230ENST00000639004 PCDHB10Q9UN67 800 aa9.41□□□□□ -0.9
FAM49B-230ENST00000639004 B2RBV5 119 aa9.4□□□□□ -0.9
FAM49B-230ENST00000639004 MSTNO14793 375 aa9.4□□□□□ -0.9
FAM49B-230ENST00000639004 U2SURPO15042 1029 aaKnown RBP9.4□□□□□ -0.9
FAM49B-230ENST00000639004 CLEC3AO75596 197 aa9.4□□□□□ -0.9
FAM49B-230ENST00000639004 ETV3P41162 512 aa9.4□□□□□ -0.9
FAM49B-230ENST00000639004 PMS1P54277 932 aaKnown RBP9.4□□□□□ -0.9
FAM49B-230ENST00000639004 RSPO4Q2I0M5 234 aaPredicted RBP9.4□□□□□ -0.9
FAM49B-230ENST00000639004 NKAPLQ5M9Q1 402 aa9.4□□□□□ -0.9
FAM49B-230ENST00000639004 C6orf15Q6UXA7 325 aaPredicted RBP9.4□□□□□ -0.9
FAM49B-230ENST00000639004 FAM214BQ7L5A3 538 aa9.4□□□□□ -0.9
FAM49B-230ENST00000639004 PPFIBP1Q86W92 1011 aa9.4□□□□□ -0.9
FAM49B-230ENST00000639004 FBXL6Q8N531 539 aa9.4□□□□□ -0.9
FAM49B-230ENST00000639004 DHRS1Q96LJ7 313 aa9.4□□□□□ -0.9
FAM49B-230ENST00000639004 KREMEN1Q96MU8 473 aa9.4□□□□□ -0.9
FAM49B-230ENST00000639004 SUCOQ9UBS9 1254 aaKnown RBP9.4□□□□□ -0.9
FAM49B-230ENST00000639004 CNTNAP4Q9C0A0 1308 aa9.39□□□□□ -0.91
FAM49B-230ENST00000639004 FAM170BA6NMN3 283 aa9.39□□□□□ -0.91
FAM49B-230ENST00000639004 RBAK-RBAKDNI3L0D1 243 aa9.39□□□□□ -0.91
FAM49B-230ENST00000639004 F13BP05160 661 aa9.39□□□□□ -0.91
FAM49B-230ENST00000639004 NFIAQ12857 509 aa9.39□□□□□ -0.91
FAM49B-230ENST00000639004 VHLLQ6RSH7 139 aa9.39□□□□□ -0.91
FAM49B-230ENST00000639004 FAM178BQ8IXR5 827 aa9.39□□□□□ -0.91
FAM49B-230ENST00000639004 KLHL6Q8WZ60 621 aa9.39□□□□□ -0.91
FAM49B-230ENST00000639004 VWCEQ96DN2 955 aa9.39□□□□□ -0.91
FAM49B-230ENST00000639004 DBNDD2Q9BQY9 259 aa9.39□□□□□ -0.91
FAM49B-230ENST00000639004 TPX2Q9ULW0 747 aaKnown RBP9.39□□□□□ -0.91
FAM49B-230ENST00000639004 GJB6O95452 261 aa9.38□□□□□ -0.91
FAM49B-230ENST00000639004 TDRD10Q5VZ19 366 aaKnown RBP9.38□□□□□ -0.91
FAM49B-230ENST00000639004 GPAT2Q6NUI2 795 aa9.38□□□□□ -0.91
FAM49B-230ENST00000639004 ZNF746Q6NUN9 644 aaPredicted RBP9.38□□□□□ -0.91
FAM49B-230ENST00000639004 ZNF765Q7L2R6 523 aa9.38□□□□□ -0.91
FAM49B-230ENST00000639004 MKL1Q969V6 931 aa9.38□□□□□ -0.91
FAM49B-230ENST00000639004 ZNF512BQ96KM6 892 aaPredicted RBP9.38□□□□□ -0.91
FAM49B-230ENST00000639004 ZSWIM4Q9H7M6 989 aa9.38□□□□□ -0.91
FAM49B-230ENST00000639004 MAPK8IP1Q9UQF2 711 aa9.38□□□□□ -0.91
FAM49B-230ENST00000639004 MSRB2Q9Y3D2 182 aa9.38□□□□□ -0.91
FAM49B-230ENST00000639004 C9IYK1 514 aa9.37□□□□□ -0.91
FAM49B-230ENST00000639004 K7ELQ4 463 aaPredicted RBP9.37□□□□□ -0.91
FAM49B-230ENST00000639004 DDAH1O94760 285 aa9.37□□□□□ -0.91
FAM49B-230ENST00000639004 IGLV1-40P01703 118 aa9.37□□□□□ -0.91
FAM49B-230ENST00000639004 FSTP19883 344 aa9.37□□□□□ -0.91
FAM49B-230ENST00000639004 CHMP4BP1P59074 171 aa9.37□□□□□ -0.91
FAM49B-230ENST00000639004 SLC7A5Q01650 507 aa9.37□□□□□ -0.91
FAM49B-230ENST00000639004 GNPTABQ3T906 1256 aa9.37□□□□□ -0.91
FAM49B-230ENST00000639004 NBPF12Q5TAG4 269 aaPredicted RBP9.37□□□□□ -0.91
FAM49B-230ENST00000639004 RNF141Q8WVD5 230 aa9.37□□□□□ -0.91
FAM49B-230ENST00000639004 HEXIM2Q96MH2 286 aaKnown RBP9.37□□□□□ -0.91
FAM49B-230ENST00000639004 PIF1Q9H611 641 aa9.37□□□□□ -0.91
FAM49B-230ENST00000639004 PRDM5Q9NQX1 630 aaPredicted RBP9.37□□□□□ -0.91
FAM49B-230ENST00000639004 GSC2O15499 205 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms