RNA–Protein interactions for RNA: ENST00000638160.1

CHML-205, Transcript of CHM like, Rab escort protein 2, human

TSL 3 BASIC

Gene CHML, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHML-205	ENST00000638160	FMNL1	O95466	1100 aa	Predicted RBP	32.16	■■■□□ 2.74
CHML-205	ENST00000638160	APP	P05067	770 aa		32.16	■■■□□ 2.74
CHML-205	ENST00000638160	IRX3	P78415	501 aa	Predicted RBP	32.16	■■■□□ 2.74
CHML-205	ENST00000638160	TRIM47	Q96LD4	638 aa		32.16	■■■□□ 2.74
CHML-205	ENST00000638160	C12orf42	Q96LP6	360 aa		32.16	■■■□□ 2.74
CHML-205	ENST00000638160	SEC62	Q99442	399 aa	Known RBP	32.16	■■■□□ 2.74
CHML-205	ENST00000638160	CTGF	P29279	349 aa		32.15	■■■□□ 2.74
CHML-205	ENST00000638160	RGS19	P49795	217 aa		32.15	■■■□□ 2.74
CHML-205	ENST00000638160	FCGRT	P55899	365 aa		32.15	■■■□□ 2.74
CHML-205	ENST00000638160	ANKRD13C	Q8N6S4	541 aa		32.15	■■■□□ 2.74
CHML-205	ENST00000638160	ACER1	Q8TDN7	264 aa		32.15	■■■□□ 2.74
CHML-205	ENST00000638160	NACAP1	Q9BZK3	213 aa		32.15	■■■□□ 2.74
CHML-205	ENST00000638160	OSBPL3	Q9H4L5	887 aa		32.15	■■■□□ 2.74
CHML-205	ENST00000638160	SMIM22	K7EJ46	135 aa		32.14	■■■□□ 2.74
CHML-205	ENST00000638160	FAM110C	Q1W6H9	321 aa		32.14	■■■□□ 2.74
CHML-205	ENST00000638160	PLEKHM2	Q8IWE5	1019 aa		32.14	■■■□□ 2.74
CHML-205	ENST00000638160	SRRD	Q9UH36	339 aa		32.14	■■■□□ 2.74
CHML-205	ENST00000638160	PTCH2	Q9Y6C5	1203 aa		32.14	■■■□□ 2.74
CHML-205	ENST00000638160	TDO2	P48775	406 aa		32.13	■■■□□ 2.73
CHML-205	ENST00000638160	MINDY4B	A8MYZ0	360 aa		32.12	■■■□□ 2.73
CHML-205	ENST00000638160	ECM2	O94769	699 aa	Predicted RBP	32.12	■■■□□ 2.73
CHML-205	ENST00000638160	AKR1B1	P15121	316 aa		32.12	■■■□□ 2.73
CHML-205	ENST00000638160	ZYX	Q15942	572 aa	Known RBP	32.12	■■■□□ 2.73
CHML-205	ENST00000638160	IFNL3	Q8IZI9	196 aa		32.12	■■■□□ 2.73
CHML-205	ENST00000638160	ARMC5	Q96C12	935 aa		32.12	■■■□□ 2.73
CHML-205	ENST00000638160	P2RX7	Q99572	595 aa	Known RBP	32.12	■■■□□ 2.73
CHML-205	ENST00000638160	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	32.12	■■■□□ 2.73
CHML-205	ENST00000638160	NBPF11	Q86T75	865 aa		32.11	■■■□□ 2.73
CHML-205	ENST00000638160	HELLS	Q9NRZ9	838 aa		32.11	■■■□□ 2.73
CHML-205	ENST00000638160	USP17L15	C9J2P7	530 aa		32.1	■■■□□ 2.73
CHML-205	ENST00000638160	USP17L13	C9JLJ4	530 aa		32.1	■■■□□ 2.73
CHML-205	ENST00000638160	USP17L11	C9JVI0	530 aa		32.1	■■■□□ 2.73
CHML-205	ENST00000638160	USP17L18	D6R9N7	530 aa		32.1	■■■□□ 2.73
CHML-205	ENST00000638160	USP17L22	D6RA61	530 aa		32.1	■■■□□ 2.73
CHML-205	ENST00000638160	USP17L17	D6RBQ6	530 aa		32.1	■■■□□ 2.73
CHML-205	ENST00000638160	USP17L19	D6RCP7	530 aa		32.1	■■■□□ 2.73
CHML-205	ENST00000638160	USP17L20	D6RJB6	530 aa		32.1	■■■□□ 2.73
CHML-205	ENST00000638160	USP17L24	Q0WX57	530 aa		32.1	■■■□□ 2.73
CHML-205	ENST00000638160	TRIM6-TRIM34	B2RNG4	842 aa		32.09	■■■□□ 2.73
CHML-205	ENST00000638160	HERVK_113	P62684	666 aa		32.09	■■■□□ 2.73
CHML-205	ENST00000638160	SLC9C1	Q4G0N8	1177 aa		32.09	■■■□□ 2.73
CHML-205	ENST00000638160	GTF3C2	Q8WUA4	911 aa	Predicted RBP	32.09	■■■□□ 2.73
CHML-205	ENST00000638160		A0A1W2PRG0	241 aa		32.08	■■■□□ 2.73
CHML-205	ENST00000638160	SOX10	P56693	466 aa		32.08	■■■□□ 2.73
CHML-205	ENST00000638160	MKNK2	Q9HBH9	465 aa		32.08	■■■□□ 2.73
CHML-205	ENST00000638160	ZNF287	Q9HBT7	754 aa		32.08	■■■□□ 2.73
CHML-205	ENST00000638160	ARHGEF10L	Q9HCE6	1279 aa		32.08	■■■□□ 2.73
CHML-205	ENST00000638160	MORF4L1	Q9UBU8	362 aa		32.08	■■■□□ 2.73
CHML-205	ENST00000638160	ROBO3	Q96MS0	1386 aa		32.07	■■■□□ 2.73
CHML-205	ENST00000638160	MYPN	Q86TC9	1320 aa		32.07	■■■□□ 2.72
CHML-205	ENST00000638160	VCAM1	P19320	739 aa		32.07	■■■□□ 2.72
CHML-205	ENST00000638160	ICA1	Q05084	483 aa		32.07	■■■□□ 2.72
CHML-205	ENST00000638160	RILPL2	Q969X0	211 aa		32.07	■■■□□ 2.72
CHML-205	ENST00000638160	NAPB	Q9H115	298 aa		32.07	■■■□□ 2.72
CHML-205	ENST00000638160	SH2D4A	Q9H788	454 aa		32.07	■■■□□ 2.72
CHML-205	ENST00000638160	KANSL2	Q9H9L4	492 aa		32.07	■■■□□ 2.72
CHML-205	ENST00000638160	TNPO2	O14787	897 aa	Known RBP	32.06	■■■□□ 2.72
CHML-205	ENST00000638160	CATSPERG	Q6ZRH7	1159 aa		32.06	■■■□□ 2.72
CHML-205	ENST00000638160	SIAH1	Q8IUQ4	282 aa		32.06	■■■□□ 2.72
CHML-205	ENST00000638160	RAET1E	Q8TD07	263 aa		32.06	■■■□□ 2.72
CHML-205	ENST00000638160	MCMDC2	Q4G0Z9	681 aa		32.05	■■■□□ 2.72
CHML-205	ENST00000638160	TMX2	Q9Y320	296 aa		32.05	■■■□□ 2.72
CHML-205	ENST00000638160	RASA1	P20936	1047 aa		32.04	■■■□□ 2.72
CHML-205	ENST00000638160	CCDC129	Q6ZRS4	1044 aa		32.04	■■■□□ 2.72
CHML-205	ENST00000638160	GPRC5A	Q8NFJ5	357 aa		32.04	■■■□□ 2.72
CHML-205	ENST00000638160	COA7	Q96BR5	231 aa		32.04	■■■□□ 2.72
CHML-205	ENST00000638160	ZNF333	Q96JL9	665 aa		32.04	■■■□□ 2.72
CHML-205	ENST00000638160	ZSWIM8	A7E2V4	1837 aa		32.04	■■■□□ 2.72
CHML-205	ENST00000638160	SLC3A2	P08195	630 aa	Known RBP	32.03	■■■□□ 2.72
CHML-205	ENST00000638160	PRKCZ	Q05513	592 aa		32.03	■■■□□ 2.72
CHML-205	ENST00000638160	STK11IP	Q8N1F8	1099 aa		32.03	■■■□□ 2.72
CHML-205	ENST00000638160	LPAR1	Q92633	364 aa		32.03	■■■□□ 2.72
CHML-205	ENST00000638160	RPAP3	Q9H6T3	665 aa	Predicted RBP	32.03	■■■□□ 2.72
CHML-205	ENST00000638160	RBPJL	Q9UBG7	517 aa		32.03	■■■□□ 2.72
CHML-205	ENST00000638160	MYH8	P13535	1937 aa		32.02	■■■□□ 2.72
CHML-205	ENST00000638160	HTT	P42858	3142 aa		32.02	■■■□□ 2.72
CHML-205	ENST00000638160	MLLT1	Q03111	559 aa	Predicted RBP	32.02	■■■□□ 2.72
CHML-205	ENST00000638160	ZNF444	Q8N0Y2	327 aa	Predicted RBP	32.02	■■■□□ 2.72
CHML-205	ENST00000638160	FAM227B	Q96M60	508 aa		32.02	■■■□□ 2.72
CHML-205	ENST00000638160	EEF2	P13639	858 aa	Known RBP	32.01	■■■□□ 2.71
CHML-205	ENST00000638160	CLEC10A	Q8IUN9	316 aa		32.01	■■■□□ 2.71
CHML-205	ENST00000638160	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	32.01	■■■□□ 2.71
CHML-205	ENST00000638160	TXNRD2	Q9NNW7	524 aa		32.01	■■■□□ 2.71
CHML-205	ENST00000638160	GABRQ	Q9UN88	632 aa		32.01	■■■□□ 2.71
CHML-205	ENST00000638160		A0A0D9SFI3	127 aa		32	■■■□□ 2.71
CHML-205	ENST00000638160	FLT3LG	P49771	235 aa		32	■■■□□ 2.71
CHML-205	ENST00000638160	PDE4B	Q07343	736 aa		32	■■■□□ 2.71
CHML-205	ENST00000638160	PPARA	Q07869	468 aa		32	■■■□□ 2.71
CHML-205	ENST00000638160	SH3TC2	Q8TF17	1288 aa		32	■■■□□ 2.71
CHML-205	ENST00000638160	VCPKMT	Q9H867	229 aa		32	■■■□□ 2.71
CHML-205	ENST00000638160	RABGAP1	Q9Y3P9	1069 aa		32	■■■□□ 2.71
CHML-205	ENST00000638160	FOXP2	O15409	715 aa		31.99	■■■□□ 2.71
CHML-205	ENST00000638160	SDS	P20132	328 aa		31.99	■■■□□ 2.71
CHML-205	ENST00000638160	GRK4	P32298	578 aa		31.99	■■■□□ 2.71
CHML-205	ENST00000638160	NMI	Q13287	307 aa	Predicted RBP	31.99	■■■□□ 2.71
CHML-205	ENST00000638160	ALX1	Q15699	326 aa		31.99	■■■□□ 2.71
CHML-205	ENST00000638160	LBX2	Q6XYB7	198 aa		31.99	■■■□□ 2.71
CHML-205	ENST00000638160	HOXC10	Q9NYD6	342 aa		31.99	■■■□□ 2.71
CHML-205	ENST00000638160	MGAM	O43451	1857 aa		31.98	■■■□□ 2.71
CHML-205	ENST00000638160	ERVK-9	P63128	1117 aa		31.98	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms