RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.45■■□□□ 1.18
CLN6-212ENST00000636020 USP17L15C9J2P7 530 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 USP17L13C9JLJ4 530 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 USP17L11C9JVI0 530 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 USP17L18D6R9N7 530 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 USP17L22D6RA61 530 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 USP17L17D6RBQ6 530 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 USP17L19D6RCP7 530 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 USP17L20D6RJB6 530 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 GDF11O95390 407 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 TLE2Q04725 743 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 USP17L24Q0WX57 530 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 ANO1Q5XXA6 986 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 SH3RF3Q8TEJ3 882 aaPredicted RBP22.45■■□□□ 1.18
CLN6-212ENST00000636020 XAGE2Q96GT9 111 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 TACC3Q9Y6A5 838 aa22.45■■□□□ 1.18
CLN6-212ENST00000636020 TBC1D9Q6ZT07 1266 aa22.44■■□□□ 1.18
CLN6-212ENST00000636020 ADAMTS19Q8TE59 1207 aa22.44■■□□□ 1.18
CLN6-212ENST00000636020 FERMT2Q96AC1 680 aa22.44■■□□□ 1.18
CLN6-212ENST00000636020 C12orf42Q96LP6 360 aa22.44■■□□□ 1.18
CLN6-212ENST00000636020 HMG20BQ9P0W2 317 aa22.44■■□□□ 1.18
CLN6-212ENST00000636020 SEPT4O43236 478 aa22.43■■□□□ 1.18
CLN6-212ENST00000636020 MVPQ14764 893 aaKnown RBP22.43■■□□□ 1.18
CLN6-212ENST00000636020 OLFML2BQ68BL8 750 aa22.43■■□□□ 1.18
CLN6-212ENST00000636020 LBX2Q6XYB7 198 aa22.43■■□□□ 1.18
CLN6-212ENST00000636020 CATSPERGQ6ZRH7 1159 aa22.43■■□□□ 1.18
CLN6-212ENST00000636020 BTBD7Q9P203 1132 aa22.43■■□□□ 1.18
CLN6-212ENST00000636020 THEGQ9P2T0 379 aa22.43■■□□□ 1.18
CLN6-212ENST00000636020 MYO9BQ13459 2157 aa22.43■■□□□ 1.18
CLN6-212ENST00000636020 A0A1B0GUL7 405 aa22.42■■□□□ 1.18
CLN6-212ENST00000636020 MYCNP04198 464 aaPredicted RBP22.42■■□□□ 1.18
CLN6-212ENST00000636020 LRRC41Q15345 812 aa22.42■■□□□ 1.18
CLN6-212ENST00000636020 PI16Q6UXB8 463 aa22.42■■□□□ 1.18
CLN6-212ENST00000636020 PPM1EQ8WY54 764 aa22.42■■□□□ 1.18
CLN6-212ENST00000636020 UHRF1Q96T88 793 aaPredicted RBP22.42■■□□□ 1.18
CLN6-212ENST00000636020 COPRSQ9NQ92 184 aa22.42■■□□□ 1.18
CLN6-212ENST00000636020 RAI14Q9P0K7 980 aa22.42■■□□□ 1.18
CLN6-212ENST00000636020 CHD9Q3L8U1 2897 aa22.42■■□□□ 1.18
CLN6-212ENST00000636020 KIAA0355O15063 1070 aa22.41■■□□□ 1.18
CLN6-212ENST00000636020 MRPS5P82675 430 aaKnown RBP22.41■■□□□ 1.18
CLN6-212ENST00000636020 AKNAD1Q5T1N1 836 aa22.41■■□□□ 1.18
CLN6-212ENST00000636020 CRACR2BQ8N4Y2 399 aaPredicted RBP22.41■■□□□ 1.18
CLN6-212ENST00000636020 TIFAQ96CG3 184 aa22.41■■□□□ 1.18
CLN6-212ENST00000636020 CLTBP09497 229 aa22.4■■□□□ 1.18
CLN6-212ENST00000636020 UBTFL1P0CB47 393 aaPredicted RBP22.4■■□□□ 1.18
CLN6-212ENST00000636020 DPP9Q86TI2 863 aa22.4■■□□□ 1.18
CLN6-212ENST00000636020 SPATA5Q8NB90 893 aa22.4■■□□□ 1.18
CLN6-212ENST00000636020 GAS2L1Q99501 681 aaPredicted RBP22.4■■□□□ 1.18
CLN6-212ENST00000636020 TRIM34Q9BYJ4 488 aa22.4■■□□□ 1.18
CLN6-212ENST00000636020 FPGSQ05932 587 aa22.39■■□□□ 1.17
CLN6-212ENST00000636020 ZYXQ15942 572 aaKnown RBP22.39■■□□□ 1.17
CLN6-212ENST00000636020 MAPKAPK5Q8IW41 473 aa22.39■■□□□ 1.17
CLN6-212ENST00000636020 TGFBRAP1Q8WUH2 860 aa22.39■■□□□ 1.17
CLN6-212ENST00000636020 PALD1Q9ULE6 856 aa22.39■■□□□ 1.17
CLN6-212ENST00000636020 AKAP2Q9Y2D5 859 aa22.39■■□□□ 1.17
CLN6-212ENST00000636020 XIRP2A4UGR9 3374 aa22.38■■□□□ 1.17
CLN6-212ENST00000636020 GH2P01242 217 aa22.38■■□□□ 1.17
CLN6-212ENST00000636020 RAG1P15918 1043 aa22.38■■□□□ 1.17
CLN6-212ENST00000636020 ADORA2AP29274 412 aa22.38■■□□□ 1.17
CLN6-212ENST00000636020 NOL10Q9BSC4 688 aaKnown RBP22.38■■□□□ 1.17
CLN6-212ENST00000636020 AATFQ9NY61 560 aaKnown RBP eCLIP22.38■■□□□ 1.17
CLN6-212ENST00000636020 PHF24Q9UPV7 400 aa22.38■■□□□ 1.17
CLN6-212ENST00000636020 FLT1P17948 1338 aa22.37■■□□□ 1.17
CLN6-212ENST00000636020 SPDYE16A6NNV3 312 aaPredicted RBP22.37■■□□□ 1.17
CLN6-212ENST00000636020 STRNO43815 780 aa22.37■■□□□ 1.17
CLN6-212ENST00000636020 PLCG2P16885 1265 aa22.37■■□□□ 1.17
CLN6-212ENST00000636020 PPP4CP60510 307 aa22.37■■□□□ 1.17
CLN6-212ENST00000636020 FAM47AQ5JRC9 791 aa22.37■■□□□ 1.17
CLN6-212ENST00000636020 PRAMEF19Q5SWL8 479 aa22.37■■□□□ 1.17
CLN6-212ENST00000636020 FEZ1Q99689 392 aa22.37■■□□□ 1.17
CLN6-212ENST00000636020 CHD7Q9P2D1 2997 aa22.36■■□□□ 1.17
CLN6-212ENST00000636020 COBLO75128 1261 aa22.36■■□□□ 1.17
CLN6-212ENST00000636020 BAG3O95817 575 aa22.36■■□□□ 1.17
CLN6-212ENST00000636020 VCAM1P19320 739 aa22.36■■□□□ 1.17
CLN6-212ENST00000636020 USP14P54578 494 aa22.36■■□□□ 1.17
CLN6-212ENST00000636020 TFCP2Q12800 502 aa22.36■■□□□ 1.17
CLN6-212ENST00000636020 SSH1Q8WYL5 1049 aa22.36■■□□□ 1.17
CLN6-212ENST00000636020 PRDM12Q9H4Q4 367 aa22.36■■□□□ 1.17
CLN6-212ENST00000636020 LRP2BPQ9P2M1 347 aa22.36■■□□□ 1.17
CLN6-212ENST00000636020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.36■■□□□ 1.17
CLN6-212ENST00000636020 REV3LO60673 3130 aa22.36■■□□□ 1.17
CLN6-212ENST00000636020 SYNGAP1Q96PV0 1343 aa22.35■■□□□ 1.17
CLN6-212ENST00000636020 ARID4AP29374 1257 aaPredicted RBP22.35■■□□□ 1.17
CLN6-212ENST00000636020 NEUROD6Q96NK8 337 aa22.35■■□□□ 1.17
CLN6-212ENST00000636020 C1QTNF1Q9BXJ1 281 aa22.35■■□□□ 1.17
CLN6-212ENST00000636020 KIAA1683Q9H0B3 1180 aa22.35■■□□□ 1.17
CLN6-212ENST00000636020 TMEM39AQ9NV64 488 aa22.35■■□□□ 1.17
CLN6-212ENST00000636020 ZNF236Q9UL36 1845 aa22.34■■□□□ 1.17
CLN6-212ENST00000636020 ADGRE1Q14246 886 aa22.34■■□□□ 1.17
CLN6-212ENST00000636020 MOV10L1Q9BXT6 1211 aaKnown RBP22.34■■□□□ 1.17
CLN6-212ENST00000636020 SAP30BPQ9UHR5 308 aaKnown RBP22.34■■□□□ 1.17
CLN6-212ENST00000636020 ARIH1Q9Y4X5 557 aaPredicted RBP22.34■■□□□ 1.17
CLN6-212ENST00000636020 SMCHD1A6NHR9 2005 aa22.34■■□□□ 1.17
CLN6-212ENST00000636020 PQBP1O60828 265 aaKnown RBP22.33■■□□□ 1.17
CLN6-212ENST00000636020 PBX2P40425 430 aa22.33■■□□□ 1.17
CLN6-212ENST00000636020 MCAMP43121 646 aa22.33■■□□□ 1.17
CLN6-212ENST00000636020 CCDC85BQ15834 202 aaPredicted RBP22.33■■□□□ 1.17
CLN6-212ENST00000636020 NAA16Q6N069 864 aaPredicted RBP22.33■■□□□ 1.17
CLN6-212ENST00000636020 ACER1Q8TDN7 264 aa22.33■■□□□ 1.17
CLN6-212ENST00000636020 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms