RNA–Protein interactions for RNA: ENST00000629137.1

SPTAN1-218, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-218ENST00000629137 LAMB1P07942 1786 aa11.1□□□□□ -0.63
SPTAN1-218ENST00000629137 DOCK1Q14185 1865 aa11.1□□□□□ -0.63
SPTAN1-218ENST00000629137 ATAD5Q96QE3 1844 aa11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 SPDYE5A6NIY4 337 aa11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 USP17L12C9JPN9 530 aa11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 USP17L21D6R901 530 aa11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 HLA-DOAP06340 250 aa11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 HSPA1AP0DMV8 641 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 HSPA1BP0DMV9 641 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 NOL9Q5SY16 702 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 VPS53Q5VIR6 699 aa11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 DMRTA1Q5VZB9 504 aa11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 CTR9Q6PD62 1173 aa11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 ZNF589Q86UQ0 364 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 FOXP4Q8IVH2 680 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 SCYL3Q8IZE3 742 aa11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 DYNLL2Q96FJ2 89 aa11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 PPP4R2Q9NY27 417 aa11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 SERPINB13Q9UIV8 391 aa11.09□□□□□ -0.63
SPTAN1-218ENST00000629137 IRF6O14896 467 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 CTNND1O60716 968 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 GDF11O95390 407 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 ZBTB48P10074 688 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 PTPRAP18433 802 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 SHMT1P34896 483 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 FOSBP53539 338 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 C12orf60Q5U649 245 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 ERICH6BQ5W0A0 696 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 CWC27Q6UX04 472 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 TTC6Q86TZ1 520 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 ERO1BQ86YB8 467 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 SLC44A5Q8NCS7 719 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 EHD4Q9H223 541 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 IL25Q9H293 177 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 HELLSQ9NRZ9 838 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 WBP1LQ9NX94 342 aa11.08□□□□□ -0.64
SPTAN1-218ENST00000629137 PHIPQ8WWQ0 1821 aa11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 PATL2C9JE40 543 aaKnown RBP11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 FOXN1O15353 648 aa11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 APPP05067 770 aa11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 GNAT2P19087 354 aa11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 CAP2P40123 477 aa11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 MAP2K1Q02750 393 aaPredicted RBP11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 PPATQ06203 517 aa11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 GABPAQ06546 454 aa11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 MCMDC2Q4G0Z9 681 aa11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 TATDN1Q6P1N9 297 aa11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 IFNL3Q8IZI9 196 aa11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 STK11IPQ8N1F8 1099 aa11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 TRIM34Q9BYJ4 488 aa11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 TSKSQ9UJT2 592 aa11.07□□□□□ -0.64
SPTAN1-218ENST00000629137 MINDY4BA8MYZ0 360 aa11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 TM4SF4P48230 202 aa11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 TDO2P48775 406 aa11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 PPIL2Q13356 520 aa11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 GIMAP6Q6P9H5 292 aa11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 TICAM2Q86XR7 235 aa11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 BRI3BPQ8WY22 251 aa11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 RNF166Q96A37 237 aaPredicted RBP11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 DDRGK1Q96HY6 314 aa11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 KCNK17Q96T54 332 aa11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 PTPN18Q99952 460 aa11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 PICK1Q9NRD5 415 aa11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 DIAPH3Q9NSV4 1193 aa11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 ARPP21Q9UBL0 812 aaPredicted RBP11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 ZHX2Q9Y6X8 837 aa11.06□□□□□ -0.64
SPTAN1-218ENST00000629137 CCL15-CCL14A0A0B4J2E2 113 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 TESPA1A2RU30 521 aaPredicted RBP11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 MANSC4A6NHS7 340 aaPredicted RBP11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 IGF2BP3O00425 579 aaKnown RBP eCLIP11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 DPYSL4O14531 572 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 GH2P01242 217 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 GTF2A2P52657 109 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 SREBF2Q12772 1141 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 DGKZQ13574 1117 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 MOGSQ13724 837 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 CCL15Q16663 113 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 CERKLQ49MI3 558 aaPredicted RBP11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 SBK1Q52WX2 424 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 C16orf86Q6ZW13 317 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 RNF186Q9NXI6 227 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 ZBTB21Q9ULJ3 1066 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 KCNH4Q9UQ05 1017 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 AFG3L2Q9Y4W6 797 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 CCDC171Q6TFL3 1326 aa11.05□□□□□ -0.64
SPTAN1-218ENST00000629137 TRIM75PA6NK02 468 aa11.04□□□□□ -0.64
SPTAN1-218ENST00000629137 HIP1O00291 1037 aa11.04□□□□□ -0.64
SPTAN1-218ENST00000629137 TRPA1O75762 1119 aa11.04□□□□□ -0.64
SPTAN1-218ENST00000629137 HSPD1P10809 573 aaKnown RBP11.04□□□□□ -0.64
SPTAN1-218ENST00000629137 CHMLP26374 656 aa11.04□□□□□ -0.64
SPTAN1-218ENST00000629137 GUCY1A2P33402 732 aa11.04□□□□□ -0.64
SPTAN1-218ENST00000629137 CDK8P49336 464 aa11.04□□□□□ -0.64
SPTAN1-218ENST00000629137 ADGRD1Q6QNK2 874 aa11.04□□□□□ -0.64
SPTAN1-218ENST00000629137 AMOTL1Q8IY63 956 aa11.04□□□□□ -0.64
SPTAN1-218ENST00000629137 NAPBQ9H115 298 aa11.04□□□□□ -0.64
SPTAN1-218ENST00000629137 TACC3Q9Y6A5 838 aa11.04□□□□□ -0.64
SPTAN1-218ENST00000629137 ROBO3Q96MS0 1386 aa11.03□□□□□ -0.64
SPTAN1-218ENST00000629137 USP17L5A8MUK1 530 aa11.03□□□□□ -0.64
SPTAN1-218ENST00000629137 ASNSP08243 561 aa11.03□□□□□ -0.64
SPTAN1-218ENST00000629137 HSPA8P11142 646 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms