RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 COL26A1Q96A83 441 aa8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 CDC5LQ99459 802 aaKnown RBP8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 ZNF341Q9BYN7 854 aa8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 CHPF2Q9P2E5 772 aa8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 SERPINA10Q9UK55 444 aa8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 FCF1Q9Y324 198 aaKnown RBP8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 TRANK1O15050 2925 aa8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 CFAP47Q6ZTR5 3102 aa8.96□□□□□ -0.98
SCAMP1-206ENST00000618166 CACNA1BQ00975 2339 aa8.95□□□□□ -0.98
SCAMP1-206ENST00000618166 AK9Q5TCS8 1911 aa8.95□□□□□ -0.98
SCAMP1-206ENST00000618166 FRMPD3Q5JV73 1810 aa8.95□□□□□ -0.98
SCAMP1-206ENST00000618166 TTC24A2A3L6 582 aaPredicted RBP8.95□□□□□ -0.98
SCAMP1-206ENST00000618166 CXCL11O14625 94 aa8.95□□□□□ -0.98
SCAMP1-206ENST00000618166 TREML2Q5T2D2 321 aa8.95□□□□□ -0.98
SCAMP1-206ENST00000618166 GJC2Q5T442 439 aaPredicted RBP8.95□□□□□ -0.98
SCAMP1-206ENST00000618166 PRSS33Q8NF86 280 aa8.95□□□□□ -0.98
SCAMP1-206ENST00000618166 NKX2-4Q9H2Z4 354 aa8.95□□□□□ -0.98
SCAMP1-206ENST00000618166 SENP2Q9HC62 589 aa8.95□□□□□ -0.98
SCAMP1-206ENST00000618166 PKD1L2Q7Z442 2459 aa8.95□□□□□ -0.98
SCAMP1-206ENST00000618166 RPAP1Q9BWH6 1393 aaPredicted RBP8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 PLXNA1Q9UIW2 1896 aa8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 ZFHX2Q9C0A1 2572 aaPredicted RBP8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 IL1R1P14778 569 aa8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 ZKSCAN1P17029 563 aaPredicted RBP8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 CTSWP56202 376 aa8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 FKBP1AP62942 108 aaKnown RBP8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 TRIM28Q13263 835 aaKnown RBP8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 CSPP1Q1MSJ5 1256 aa8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 DCAF15Q66K64 600 aa8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 KRT40Q6A162 431 aa8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 FASTKD5Q7L8L6 764 aaKnown RBP8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 CCDC84Q86UT8 332 aaPredicted RBP8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 BBXQ8WY36 941 aaPredicted RBP8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 KCNH6Q9H252 994 aa8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 TSPYL4Q9UJ04 414 aa8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 ZNF112Q9UJU3 913 aa8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 YBX2Q9Y2T7 364 aaKnown RBP8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 ZHX2Q9Y6X8 837 aa8.94□□□□□ -0.98
SCAMP1-206ENST00000618166 EPG5Q9HCE0 2579 aa8.93□□□□□ -0.98
SCAMP1-206ENST00000618166 RFXAPO00287 272 aa8.93□□□□□ -0.98
SCAMP1-206ENST00000618166 DNM1LO00429 736 aa8.93□□□□□ -0.98
SCAMP1-206ENST00000618166 TAF5LO75529 589 aa8.93□□□□□ -0.98
SCAMP1-206ENST00000618166 PCCAP05165 728 aaPredicted RBP8.93□□□□□ -0.98
SCAMP1-206ENST00000618166 SMPD1P17405 629 aa8.93□□□□□ -0.98
SCAMP1-206ENST00000618166 KCNJ4P48050 445 aa8.93□□□□□ -0.98
SCAMP1-206ENST00000618166 FPGSQ05932 587 aa8.93□□□□□ -0.98
SCAMP1-206ENST00000618166 MFSD14BQ5SR56 506 aa8.93□□□□□ -0.98
SCAMP1-206ENST00000618166 NOL9Q5SY16 702 aaKnown RBP8.93□□□□□ -0.98
SCAMP1-206ENST00000618166 TTLL11Q8NHH1 800 aa8.93□□□□□ -0.98
SCAMP1-206ENST00000618166 FAM86C1Q9NVL1 165 aa8.93□□□□□ -0.98
SCAMP1-206ENST00000618166 SLC45A1Q9Y2W3 748 aa8.93□□□□□ -0.98
SCAMP1-206ENST00000618166 DMDP11532 3685 aa8.92□□□□□ -0.98
SCAMP1-206ENST00000618166 RLFQ13129 1914 aa8.92□□□□□ -0.98
SCAMP1-206ENST00000618166 TRIOO75962 3097 aa8.92□□□□□ -0.98
SCAMP1-206ENST00000618166 TRIM75PA6NK02 468 aa8.92□□□□□ -0.98
SCAMP1-206ENST00000618166 SLURP2P0DP57 97 aa8.92□□□□□ -0.98
SCAMP1-206ENST00000618166 TLE2Q04725 743 aa8.92□□□□□ -0.98
SCAMP1-206ENST00000618166 SNX17Q15036 470 aa8.92□□□□□ -0.98
SCAMP1-206ENST00000618166 HFE2Q6ZVN8 426 aa8.92□□□□□ -0.98
SCAMP1-206ENST00000618166 C16orf59Q7L2K0 433 aa8.92□□□□□ -0.98
SCAMP1-206ENST00000618166 HERVK_113Q902F9 699 aa8.92□□□□□ -0.98
SCAMP1-206ENST00000618166 THAP11Q96EK4 314 aa8.92□□□□□ -0.98
SCAMP1-206ENST00000618166 MYD88Q99836 296 aa8.92□□□□□ -0.98
SCAMP1-206ENST00000618166 AFG3L2Q9Y4W6 797 aa8.92□□□□□ -0.98
SCAMP1-206ENST00000618166 PTPRAP18433 802 aa8.91□□□□□ -0.98
SCAMP1-206ENST00000618166 LORP23490 312 aaPredicted RBP8.91□□□□□ -0.98
SCAMP1-206ENST00000618166 CHRNDQ07001 517 aa8.91□□□□□ -0.98
SCAMP1-206ENST00000618166 LPAR1Q92633 364 aa8.91□□□□□ -0.98
SCAMP1-206ENST00000618166 FERMT2Q96AC1 680 aa8.91□□□□□ -0.98
SCAMP1-206ENST00000618166 FLRT1Q9NZU1 646 aa8.91□□□□□ -0.98
SCAMP1-206ENST00000618166 DDX20Q9UHI6 824 aaKnown RBP8.91□□□□□ -0.98
SCAMP1-206ENST00000618166 AGTPBP1Q9UPW5 1226 aa8.91□□□□□ -0.98
SCAMP1-206ENST00000618166 WNT7AO00755 349 aa8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 XRCC5P13010 732 aaKnown RBP8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 RAG1P15918 1043 aa8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 CNGA1P29973 690 aa8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 ANO1Q5XXA6 986 aa8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 ERMP1Q7Z2K6 904 aa8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 ZNF804AQ7Z570 1209 aa8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 FAM83AQ86UY5 434 aa8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 GJD3Q8N144 294 aa8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 TRPV1Q8NER1 839 aa8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 SNIP1Q8TAD8 396 aaKnown RBP8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 USP6NLQ92738 828 aa8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 NUDT12Q9BQG2 462 aa8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 ANKRD2Q9GZV1 360 aa8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 MTCH2Q9Y6C9 303 aa8.9□□□□□ -0.98
SCAMP1-206ENST00000618166 DNAH14Q0VDD8 3507 aa8.9□□□□□ -0.99
SCAMP1-206ENST00000618166 ZNF318Q5VUA4 2279 aa8.9□□□□□ -0.99
SCAMP1-206ENST00000618166 DLG5Q8TDM6 1919 aa8.89□□□□□ -0.99
SCAMP1-206ENST00000618166 MED19A0JLT2 244 aaPredicted RBP8.89□□□□□ -0.99
SCAMP1-206ENST00000618166 CLTBP09497 229 aa8.89□□□□□ -0.99
SCAMP1-206ENST00000618166 MYOGP15173 224 aa8.89□□□□□ -0.99
SCAMP1-206ENST00000618166 IGHMBP2P38935 993 aaKnown RBP8.89□□□□□ -0.99
SCAMP1-206ENST00000618166 ADCYAP1R1P41586 468 aa8.89□□□□□ -0.99
SCAMP1-206ENST00000618166 RASIP1Q5U651 963 aa8.89□□□□□ -0.99
SCAMP1-206ENST00000618166 FAM160A2Q8N612 972 aaPredicted RBP8.89□□□□□ -0.99
SCAMP1-206ENST00000618166 KIFC2Q96AC6 838 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms