RNA–Protein interactions for RNA: ENST00000615771.5

RBM39-244, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-244ENST00000615771 PDZD3Q86UT5 571 aa8.38□□□□□ -1.07
RBM39-244ENST00000615771 KRTAP1-3Q8IUG1 177 aa8.38□□□□□ -1.07
RBM39-244ENST00000615771 SLC26A8Q96RN1 970 aa8.38□□□□□ -1.07
RBM39-244ENST00000615771 BIN2Q9UBW5 565 aaPredicted RBP8.38□□□□□ -1.07
RBM39-244ENST00000615771 MAST1Q9Y2H9 1570 aa8.38□□□□□ -1.07
RBM39-244ENST00000615771 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.37□□□□□ -1.07
RBM39-244ENST00000615771 ZNF157P51786 506 aaPredicted RBP8.37□□□□□ -1.07
RBM39-244ENST00000615771 CBLL1Q75N03 491 aa8.37□□□□□ -1.07
RBM39-244ENST00000615771 FANCD2OSQ96PS1 177 aa8.37□□□□□ -1.07
RBM39-244ENST00000615771 ZC3H7BQ9UGR2 993 aaKnown RBP8.37□□□□□ -1.07
RBM39-244ENST00000615771 GPN3Q9UHW5 284 aaPredicted RBP8.37□□□□□ -1.07
RBM39-244ENST00000615771 CHD2O14647 1828 aaKnown RBP8.37□□□□□ -1.07
RBM39-244ENST00000615771 MYOM3Q5VTT5 1437 aa8.37□□□□□ -1.07
RBM39-244ENST00000615771 MTUS2Q5JR59 1369 aa8.36□□□□□ -1.07
RBM39-244ENST00000615771 MROH1Q8NDA8 1641 aa8.36□□□□□ -1.07
RBM39-244ENST00000615771 TMEM2Q9UHN6 1383 aa8.36□□□□□ -1.07
RBM39-244ENST00000615771 EFCAB6Q5THR3 1501 aa8.36□□□□□ -1.07
RBM39-244ENST00000615771 CAMSAP2Q08AD1 1489 aa8.36□□□□□ -1.07
RBM39-244ENST00000615771 TET3O43151 1660 aa8.36□□□□□ -1.07
RBM39-244ENST00000615771 EIF2AK4Q9P2K8 1649 aaKnown RBP8.36□□□□□ -1.07
RBM39-244ENST00000615771 PNMA6FA0A0J9YX94 578 aa8.35□□□□□ -1.07
RBM39-244ENST00000615771 CENPBP07199 599 aaPredicted RBP8.35□□□□□ -1.07
RBM39-244ENST00000615771 MAPK1P28482 360 aa8.35□□□□□ -1.07
RBM39-244ENST00000615771 PLCB3Q01970 1234 aa8.35□□□□□ -1.07
RBM39-244ENST00000615771 PIDD1Q9HB75 910 aa8.35□□□□□ -1.07
RBM39-244ENST00000615771 LRRC4CQ9HCJ2 640 aa8.35□□□□□ -1.07
RBM39-244ENST00000615771 DISC1Q9NRI5 854 aa8.35□□□□□ -1.07
RBM39-244ENST00000615771 NHSL1Q5SYE7 1610 aa8.35□□□□□ -1.07
RBM39-244ENST00000615771 HFM1A2PYH4 1435 aa8.35□□□□□ -1.07
RBM39-244ENST00000615771 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.34□□□□□ -1.07
RBM39-244ENST00000615771 CYP27C1Q4G0S4 372 aa8.34□□□□□ -1.07
RBM39-244ENST00000615771 SULF2Q8IWU5 870 aa8.34□□□□□ -1.07
RBM39-244ENST00000615771 AGBL5Q8NDL9 886 aa8.34□□□□□ -1.07
RBM39-244ENST00000615771 C3orf58Q8NDZ4 430 aa8.34□□□□□ -1.07
RBM39-244ENST00000615771 FBF1Q8TES7 1133 aa8.34□□□□□ -1.07
RBM39-244ENST00000615771 ZC3H12CQ9C0D7 883 aaKnown RBP8.34□□□□□ -1.07
RBM39-244ENST00000615771 PTPN23Q9H3S7 1636 aa8.33□□□□□ -1.08
RBM39-244ENST00000615771 NME2P22392 152 aa8.33□□□□□ -1.08
RBM39-244ENST00000615771 ARNTP27540 789 aa8.33□□□□□ -1.08
RBM39-244ENST00000615771 ITGAEP38570 1179 aa8.33□□□□□ -1.08
RBM39-244ENST00000615771 FAM50AQ14320 339 aaKnown RBP8.33□□□□□ -1.08
RBM39-244ENST00000615771 NXPE4Q6UWF7 544 aa8.33□□□□□ -1.08
RBM39-244ENST00000615771 TP53INP2Q8IXH6 220 aa8.33□□□□□ -1.08
RBM39-244ENST00000615771 SMYD4Q8IYR2 804 aaPredicted RBP8.33□□□□□ -1.08
RBM39-244ENST00000615771 FLCNQ8NFG4 579 aa8.33□□□□□ -1.08
RBM39-244ENST00000615771 EMILIN2Q9BXX0 1053 aa8.33□□□□□ -1.08
RBM39-244ENST00000615771 SRCIN1Q9C0H9 1055 aa8.33□□□□□ -1.08
RBM39-244ENST00000615771 PAK6Q9NQU5 681 aaPredicted RBP8.33□□□□□ -1.08
RBM39-244ENST00000615771 CACNA2D2Q9NY47 1150 aa8.33□□□□□ -1.08
RBM39-244ENST00000615771 TIMELESSQ9UNS1 1208 aa8.33□□□□□ -1.08
RBM39-244ENST00000615771 RNF114Q9Y508 228 aa8.33□□□□□ -1.08
RBM39-244ENST00000615771 ASXL1Q8IXJ9 1541 aa8.33□□□□□ -1.08
RBM39-244ENST00000615771 YY1P25490 414 aa8.32□□□□□ -1.08
RBM39-244ENST00000615771 FMR1Q06787 632 aaKnown RBP eCLIP8.32□□□□□ -1.086e-13■□□□□ 10.3
RBM39-244ENST00000615771 ZNF252P-AS1Q0IIN9 211 aa8.32□□□□□ -1.08
RBM39-244ENST00000615771 STK35Q8TDR2 534 aa8.32□□□□□ -1.08
RBM39-244ENST00000615771 ADGRB3O60242 1522 aa8.32□□□□□ -1.08
RBM39-244ENST00000615771 MYO5BQ9ULV0 1848 aa8.31□□□□□ -1.08
RBM39-244ENST00000615771 GCC2Q8IWJ2 1684 aa8.31□□□□□ -1.08
RBM39-244ENST00000615771 ATF3P18847 181 aa8.31□□□□□ -1.08
RBM39-244ENST00000615771 CDK5R2Q13319 367 aa8.31□□□□□ -1.08
RBM39-244ENST00000615771 TTLL4Q14679 1199 aa8.31□□□□□ -1.08
RBM39-244ENST00000615771 COL19A1Q14993 1142 aa8.31□□□□□ -1.08
RBM39-244ENST00000615771 STK11IPQ8N1F8 1099 aa8.31□□□□□ -1.08
RBM39-244ENST00000615771 ANKRD24Q8TF21 1146 aa8.31□□□□□ -1.08
RBM39-244ENST00000615771 BCL7CQ8WUZ0 217 aaPredicted RBP8.31□□□□□ -1.08
RBM39-244ENST00000615771 KCNB2Q92953 911 aa8.31□□□□□ -1.08
RBM39-244ENST00000615771 MISP3Q96FF7 219 aa8.31□□□□□ -1.08
RBM39-244ENST00000615771 LGR6Q9HBX8 967 aa8.31□□□□□ -1.08
RBM39-244ENST00000615771 PPM1HQ9ULR3 514 aa8.31□□□□□ -1.08
RBM39-244ENST00000615771 AKAP2Q9Y2D5 859 aa8.31□□□□□ -1.08
RBM39-244ENST00000615771 FAM87AP0C7U9 286 aa8.3□□□□□ -1.08
RBM39-244ENST00000615771 GSTT1P30711 240 aa8.3□□□□□ -1.08
RBM39-244ENST00000615771 ERVK-24P63145 666 aa8.3□□□□□ -1.08
RBM39-244ENST00000615771 ZC3H12AQ5D1E8 599 aaKnown RBP8.3□□□□□ -1.08
RBM39-244ENST00000615771 NECAB3Q96P71 396 aaPredicted RBP8.3□□□□□ -1.08
RBM39-244ENST00000615771 PCOLCE2Q9UKZ9 415 aa8.3□□□□□ -1.08
RBM39-244ENST00000615771 SLC5A6Q9Y289 635 aa8.3□□□□□ -1.08
RBM39-244ENST00000615771 PNPLA6Q8IY17 1366 aa8.3□□□□□ -1.08
RBM39-244ENST00000615771 ARHGEF5Q12774 1597 aa8.3□□□□□ -1.08
RBM39-244ENST00000615771 NAIPQ13075 1403 aa8.29□□□□□ -1.08
RBM39-244ENST00000615771 GIPC1O14908 333 aa8.29□□□□□ -1.08
RBM39-244ENST00000615771 NEFMP07197 916 aa8.29□□□□□ -1.08
RBM39-244ENST00000615771 ITGB5P18084 799 aa8.29□□□□□ -1.08
RBM39-244ENST00000615771 BRINP3Q76B58 766 aa8.29□□□□□ -1.08
RBM39-244ENST00000615771 DEFB132Q7Z7B7 95 aa8.29□□□□□ -1.08
RBM39-244ENST00000615771 WFDC3Q8IUB2 231 aa8.29□□□□□ -1.08
RBM39-244ENST00000615771 ZSCAN29Q8IWY8 852 aaPredicted RBP8.29□□□□□ -1.08
RBM39-244ENST00000615771 ASB16Q96NS5 453 aa8.29□□□□□ -1.08
RBM39-244ENST00000615771 MKNK2Q9HBH9 465 aa8.29□□□□□ -1.08
RBM39-244ENST00000615771 TRPC5Q9UL62 973 aaPredicted RBP8.29□□□□□ -1.08
RBM39-244ENST00000615771 BLMP54132 1417 aaPredicted RBP8.29□□□□□ -1.08
RBM39-244ENST00000615771 HCLS1P14317 486 aaPredicted RBP8.28□□□□□ -1.08
RBM39-244ENST00000615771 KCNA1Q09470 495 aa8.28□□□□□ -1.08
RBM39-244ENST00000615771 MAP1SQ66K74 1059 aaPredicted RBP8.28□□□□□ -1.08
RBM39-244ENST00000615771 SCARA3Q6AZY7 606 aa8.28□□□□□ -1.08
RBM39-244ENST00000615771 RNF214Q8ND24 703 aa8.28□□□□□ -1.08
RBM39-244ENST00000615771 CEP44Q9C0F1 390 aa8.28□□□□□ -1.08
RBM39-244ENST00000615771 BRWD3Q6RI45 1802 aa8.28□□□□□ -1.08
RBM39-244ENST00000615771 ATRNO75882 1429 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms