RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 BCL7CQ8WUZ0 217 aaPredicted RBP8.44□□□□□ -1.06
SCAMP1-205ENST00000614488 HRASLS5Q96KN8 279 aa8.44□□□□□ -1.06
SCAMP1-205ENST00000614488 GMIPQ9P107 970 aa8.44□□□□□ -1.06
SCAMP1-205ENST00000614488 SLC5A6Q9Y289 635 aa8.44□□□□□ -1.06
SCAMP1-205ENST00000614488 CHURC1-FNTBB4DL54 471 aa8.43□□□□□ -1.06
SCAMP1-205ENST00000614488 FLCNQ8NFG4 579 aa8.43□□□□□ -1.06
SCAMP1-205ENST00000614488 CCDC74BQ96LY2 380 aa8.43□□□□□ -1.06
SCAMP1-205ENST00000614488 CNTNAP4Q9C0A0 1308 aa8.43□□□□□ -1.06
SCAMP1-205ENST00000614488 SLC22A31A6NKX4 558 aa8.42□□□□□ -1.06
SCAMP1-205ENST00000614488 MCM4P33991 863 aa8.42□□□□□ -1.06
SCAMP1-205ENST00000614488 CLCQ05315 142 aa8.42□□□□□ -1.06
SCAMP1-205ENST00000614488 LRRFIP1Q32MZ4 808 aaKnown RBP8.42□□□□□ -1.06
SCAMP1-205ENST00000614488 GK5Q6ZS86 529 aa8.42□□□□□ -1.06
SCAMP1-205ENST00000614488 WFDC3Q8IUB2 231 aa8.42□□□□□ -1.06
SCAMP1-205ENST00000614488 AGBL5Q8NDL9 886 aa8.42□□□□□ -1.06
SCAMP1-205ENST00000614488 SPATA32Q96LK8 384 aa8.42□□□□□ -1.06
SCAMP1-205ENST00000614488 PAK6Q9NQU5 681 aaPredicted RBP8.42□□□□□ -1.06
SCAMP1-205ENST00000614488 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.42□□□□□ -1.06
SCAMP1-205ENST00000614488 CAPN6Q9Y6Q1 641 aa8.42□□□□□ -1.06
SCAMP1-205ENST00000614488 MEIS3P2A8K0S8 358 aa8.41□□□□□ -1.06
SCAMP1-205ENST00000614488 PRR33A8MZF0 331 aa8.41□□□□□ -1.06
SCAMP1-205ENST00000614488 COL9A2Q14055 689 aaPredicted RBP8.41□□□□□ -1.06
SCAMP1-205ENST00000614488 CDCP2Q5VXM1 449 aa8.41□□□□□ -1.06
SCAMP1-205ENST00000614488 OVOS1Q6IE37 1185 aa8.41□□□□□ -1.06
SCAMP1-205ENST00000614488 ZNF428Q96B54 188 aa8.41□□□□□ -1.06
SCAMP1-205ENST00000614488 TGIF2Q9GZN2 237 aa8.41□□□□□ -1.06
SCAMP1-205ENST00000614488 ZNRF3Q9ULT6 936 aa8.41□□□□□ -1.06
SCAMP1-205ENST00000614488 FAM155AB1AL88 458 aaPredicted RBP8.4□□□□□ -1.06
SCAMP1-205ENST00000614488 IMPDH2P12268 514 aa8.4□□□□□ -1.06
SCAMP1-205ENST00000614488 PAK2Q13177 524 aa8.4□□□□□ -1.06
SCAMP1-205ENST00000614488 AOC3Q16853 763 aa8.4□□□□□ -1.06
SCAMP1-205ENST00000614488 C9orf131Q5VYM1 1079 aa8.4□□□□□ -1.06
SCAMP1-205ENST00000614488 PHACTR4Q8IZ21 702 aa8.4□□□□□ -1.06
SCAMP1-205ENST00000614488 PIWIL2Q8TC59 973 aaKnown RBP8.4□□□□□ -1.06
SCAMP1-205ENST00000614488 TMEM40Q8WWA1 233 aa8.4□□□□□ -1.06
SCAMP1-205ENST00000614488 ASB11Q8WXH4 323 aa8.4□□□□□ -1.06
SCAMP1-205ENST00000614488 KRTAP4-8Q9BYQ9 185 aa8.4□□□□□ -1.06
SCAMP1-205ENST00000614488 OAS3Q9Y6K5 1087 aaKnown RBP8.4□□□□□ -1.06
SCAMP1-205ENST00000614488 PITPNM2Q9BZ72 1349 aa8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 RGS13O14921 159 aa8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 CBX7O95931 251 aa8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 RAG1P15918 1043 aa8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 TCF3P15923 654 aa8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 GJA8P48165 433 aa8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 TNNI2P48788 182 aa8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 RBM25P49756 843 aaKnown RBP8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 RAD51AP2Q09MP3 1159 aa8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 ARSHQ5FYA8 562 aa8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 BAHD1Q8TBE0 780 aaPredicted RBP8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 RASGRP4Q8TDF6 673 aa8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 RNF141Q8WVD5 230 aa8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 CNNM2Q9H8M5 875 aa8.39□□□□□ -1.07
SCAMP1-205ENST00000614488 COL17A1Q9UMD9 1497 aaPredicted RBP8.38□□□□□ -1.07
SCAMP1-205ENST00000614488 BNIP3Q12983 259 aa8.38□□□□□ -1.07
SCAMP1-205ENST00000614488 ZNF574Q6ZN55 896 aaPredicted RBP8.38□□□□□ -1.07
SCAMP1-205ENST00000614488 NLRC3Q7RTR2 1065 aa8.38□□□□□ -1.07
SCAMP1-205ENST00000614488 SPRED2Q7Z698 418 aa8.38□□□□□ -1.07
SCAMP1-205ENST00000614488 THAP5Q7Z6K1 395 aa8.38□□□□□ -1.07
SCAMP1-205ENST00000614488 TP53INP2Q8IXH6 220 aa8.38□□□□□ -1.07
SCAMP1-205ENST00000614488 GPRASP2Q96D09 838 aa8.38□□□□□ -1.07
SCAMP1-205ENST00000614488 ATG4CQ96DT6 458 aa8.38□□□□□ -1.07
SCAMP1-205ENST00000614488 KIF2CQ99661 725 aa8.38□□□□□ -1.07
SCAMP1-205ENST00000614488 ASPNQ9BXN1 380 aa8.38□□□□□ -1.07
SCAMP1-205ENST00000614488 ST14Q9Y5Y6 855 aa8.38□□□□□ -1.07
SCAMP1-205ENST00000614488 CD8BP10966 210 aa8.37□□□□□ -1.07
SCAMP1-205ENST00000614488 CCNFP41002 786 aa8.37□□□□□ -1.07
SCAMP1-205ENST00000614488 TNK2Q07912 1038 aa8.37□□□□□ -1.07
SCAMP1-205ENST00000614488 ANGEL2Q5VTE6 544 aaKnown RBP8.37□□□□□ -1.07
SCAMP1-205ENST00000614488 ABI1Q8IZP0 508 aa8.37□□□□□ -1.07
SCAMP1-205ENST00000614488 Q96M66 194 aa8.37□□□□□ -1.07
SCAMP1-205ENST00000614488 KREMEN1Q96MU8 473 aa8.37□□□□□ -1.07
SCAMP1-205ENST00000614488 CCSER2Q9H7U1 834 aa8.37□□□□□ -1.07
SCAMP1-205ENST00000614488 SEMA3GQ9NS98 782 aa8.37□□□□□ -1.07
SCAMP1-205ENST00000614488 TNFRSF10CO14798 259 aa8.36□□□□□ -1.07
SCAMP1-205ENST00000614488 NME1P15531 152 aaKnown RBP8.36□□□□□ -1.07
SCAMP1-205ENST00000614488 FUT4P22083 530 aa8.36□□□□□ -1.07
SCAMP1-205ENST00000614488 GBP1P32455 592 aa8.36□□□□□ -1.07
SCAMP1-205ENST00000614488 HSPA12BQ96MM6 686 aa8.36□□□□□ -1.07
SCAMP1-205ENST00000614488 FERD3LQ96RJ6 166 aa8.36□□□□□ -1.07
SCAMP1-205ENST00000614488 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.36□□□□□ -1.07
SCAMP1-205ENST00000614488 UBOX5O94941 541 aa8.35□□□□□ -1.07
SCAMP1-205ENST00000614488 SOX9P48436 509 aa8.35□□□□□ -1.07
SCAMP1-205ENST00000614488 RNF4P78317 190 aa8.35□□□□□ -1.07
SCAMP1-205ENST00000614488 CDKAL1Q5VV42 579 aa8.35□□□□□ -1.07
SCAMP1-205ENST00000614488 DTWD2Q8NBA8 298 aa8.35□□□□□ -1.07
SCAMP1-205ENST00000614488 RBBP8NLQ8NC74 664 aaPredicted RBP8.35□□□□□ -1.07
SCAMP1-205ENST00000614488 ANTXR1Q9H6X2 564 aa8.35□□□□□ -1.07
SCAMP1-205ENST00000614488 KCNH3Q9ULD8 1083 aa8.35□□□□□ -1.07
SCAMP1-205ENST00000614488 CHMP4BP1P59074 171 aa8.34□□□□□ -1.07
SCAMP1-205ENST00000614488 TAB3Q8N5C8 712 aaPredicted RBP8.34□□□□□ -1.07
SCAMP1-205ENST00000614488 VWCEQ96DN2 955 aa8.34□□□□□ -1.07
SCAMP1-205ENST00000614488 GINM1Q9NU53 330 aa8.34□□□□□ -1.07
SCAMP1-205ENST00000614488 ADGRE2Q9UHX3 823 aa8.34□□□□□ -1.07
SCAMP1-205ENST00000614488 H3BS24 57 aa8.33□□□□□ -1.08
SCAMP1-205ENST00000614488 ERCC5P28715 1186 aaPredicted RBP8.33□□□□□ -1.08
SCAMP1-205ENST00000614488 CD96P40200 585 aa8.33□□□□□ -1.08
SCAMP1-205ENST00000614488 IRAK1P51617 712 aa8.33□□□□□ -1.08
SCAMP1-205ENST00000614488 IKZF1Q13422 519 aa8.33□□□□□ -1.08
SCAMP1-205ENST00000614488 PLCL1Q15111 1095 aa8.33□□□□□ -1.08
SCAMP1-205ENST00000614488 INTS3Q68E01 1043 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 258 ms