RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 FBXO18Q8NFZ0 1043 aa13.97□□□□□ -0.17
TNFAIP3-206ENST00000612899 SYNMO15061 1565 aa13.97□□□□□ -0.17
TNFAIP3-206ENST00000612899 RGS12O14924 1447 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 UBE3CQ15386 1083 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 ZMYM1Q5SVZ6 1142 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 FNBP1Q96RU3 617 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 PCDHA7Q9UN72 937 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 NLRP1Q9C000 1473 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 ADCY9O60503 1353 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 APBA3O96018 575 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 GOLGA8HP0CJ92 632 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 TUBB4BP68371 445 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 CCDC25Q86WR0 208 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 NELFBQ8WX92 580 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 KDM5DQ9BY66 1539 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 KCNQ4P56696 695 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 CLIC6Q96NY7 704 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 NAPGQ99747 312 aaPredicted RBP13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 CCDC77Q9BR77 488 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 PICK1Q9NRD5 415 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 VPS18Q9P253 973 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 IMPACTQ9P2X3 320 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 DNM3Q9UQ16 869 aa13.96□□□□□ -0.17
TNFAIP3-206ENST00000612899 PRKG1Q13976 671 aa13.96□□□□□ -0.18
TNFAIP3-206ENST00000612899 PRDM15P57071 1507 aaPredicted RBP13.96□□□□□ -0.18
TNFAIP3-206ENST00000612899 TNNC1P63316 161 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 TMEM87AQ8NBN3 555 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 PPP1R14CQ8TAE6 165 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 CCDC97Q96F63 343 aaPredicted RBP13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 SEC31BQ9NQW1 1179 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 CEP83Q9Y592 693 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 INF2Q27J81 1249 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 MSL1Q68DK7 614 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 KIAA0825Q8IV33 1275 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 TEKT1Q969V4 418 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 SLF1Q9BQI6 1058 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 ZMYM6O95789 1325 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 ZEB2O60315 1214 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 IL6STP40189 918 aaPredicted RBP13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 SCNN1DP51172 638 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 SMTNP53814 917 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 BLIDQ8IZY5 108 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 COMMD10Q9Y6G5 202 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 KLRF2D3W0D1 207 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 KRT5P13647 590 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 TNFAIP3P21580 790 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 MAGEA1P43355 309 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 PTPN12Q05209 780 aaKnown RBP13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 NCBP1Q09161 790 aaKnown RBP13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 TMTC1Q8IUR5 882 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 PSMB7Q99436 277 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 INCENPQ9NQS7 918 aa13.95□□□□□ -0.18
TNFAIP3-206ENST00000612899 PPIP5K2O43314 1243 aa13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 TUBBP07437 444 aa13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 ALDH1B1P30837 517 aa13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 ADKP55263 362 aaKnown RBP13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 DLGAP5Q15398 846 aa13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 GPKOWQ92917 476 aaPredicted RBP eCLIP13.94□□□□□ -0.182e-6■■■■■ 37.1
TNFAIP3-206ENST00000612899 TSGA10Q9BZW7 698 aa13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 JAKMIP2Q96AA8 810 aa13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 GPR108Q9NPR9 543 aa13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 FAM207AQ9NSI2 230 aaPredicted RBP13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 ATP2A1O14983 1001 aa13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 SETSIPP0DME0 302 aa13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 CMA1P23946 247 aa13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 LRMPQ12912 555 aa13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 IQCGQ9H095 443 aaKnown RBP13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 WDR17Q8IZU2 1322 aa13.94□□□□□ -0.18
TNFAIP3-206ENST00000612899 SASH1O94885 1247 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 DOK7Q18PE1 504 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 FAM182BQ5T319 152 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 LRRC47Q8N1G4 583 aaKnown RBP13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 CLIC4Q9Y696 253 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 SPOPO43791 374 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 CIAO1O76071 339 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 NDUFA8P51970 172 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 SLC9C1Q4G0N8 1177 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 VWA3BQ502W6 1294 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 CFAP58Q5T655 872 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 MYCT1Q8N699 235 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 NLRC4Q9NPP4 1024 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 GINS2Q9Y248 185 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 SCG2P13521 617 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 APOA5Q6Q788 366 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 DDX12PQ92771 950 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 PSMD1Q99460 953 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 FRMPD2Q68DX3 1309 aaPredicted RBP13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 ELF2Q15723 593 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 NUP58Q9BVL2 599 aa13.93□□□□□ -0.18
TNFAIP3-206ENST00000612899 EXOC3O60645 756 aa13.92□□□□□ -0.18
TNFAIP3-206ENST00000612899 GCNT3O95395 438 aa13.92□□□□□ -0.18
TNFAIP3-206ENST00000612899 PPP1R7Q15435 360 aa13.92□□□□□ -0.18
TNFAIP3-206ENST00000612899 WDR44Q5JSH3 913 aa13.92□□□□□ -0.18
TNFAIP3-206ENST00000612899 ZNF804BA4D1E1 1349 aa13.92□□□□□ -0.18
TNFAIP3-206ENST00000612899 TECP42680 631 aa13.92□□□□□ -0.18
TNFAIP3-206ENST00000612899 CALCOCO2Q13137 446 aa13.92□□□□□ -0.18
TNFAIP3-206ENST00000612899 KIFC2Q96AC6 838 aa13.92□□□□□ -0.18
TNFAIP3-206ENST00000612899 SELENOSQ9BQE4 189 aa13.92□□□□□ -0.18
TNFAIP3-206ENST00000612899 TMOD4Q9NZQ9 345 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms