RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 CNTNAP1P78357 1384 aa20.98■□□□□ 0.95
VRK3-225ENST00000601912 MYH8P13535 1937 aa20.97■□□□□ 0.95
VRK3-225ENST00000601912 EGFRP00533 1210 aa20.97■□□□□ 0.95
VRK3-225ENST00000601912 ZSCAN22P10073 491 aaPredicted RBP20.97■□□□□ 0.95
VRK3-225ENST00000601912 CERKLQ49MI3 558 aaPredicted RBP20.97■□□□□ 0.95
VRK3-225ENST00000601912 PNMA1Q8ND90 353 aa20.97■□□□□ 0.95
VRK3-225ENST00000601912 CTCFLQ8NI51 663 aaPredicted RBP20.97■□□□□ 0.95
VRK3-225ENST00000601912 DNAJC18Q9H819 358 aa20.97■□□□□ 0.95
VRK3-225ENST00000601912 ORC3Q9UBD5 711 aaPredicted RBP20.97■□□□□ 0.95
VRK3-225ENST00000601912 VPS37CA5D8V6 355 aaPredicted RBP20.96■□□□□ 0.95
VRK3-225ENST00000601912 MPHOSPH10O00566 681 aaKnown RBP20.96■□□□□ 0.95
VRK3-225ENST00000601912 NFKBIBQ15653 356 aa20.96■□□□□ 0.95
VRK3-225ENST00000601912 FOXD4L5Q5VV16 416 aaPredicted RBP20.96■□□□□ 0.95
VRK3-225ENST00000601912 TATDN1Q6P1N9 297 aa20.96■□□□□ 0.95
VRK3-225ENST00000601912 FOXD4L4Q8WXT5 416 aaPredicted RBP20.96■□□□□ 0.95
VRK3-225ENST00000601912 CEP95Q96GE4 821 aa20.96■□□□□ 0.95
VRK3-225ENST00000601912 H3BQV1 296 aa20.96■□□□□ 0.95
VRK3-225ENST00000601912 TOP1P11387 765 aaKnown RBP20.96■□□□□ 0.95
VRK3-225ENST00000601912 IFNAR1P17181 557 aa20.96■□□□□ 0.95
VRK3-225ENST00000601912 KIF5BP33176 963 aa20.96■□□□□ 0.95
VRK3-225ENST00000601912 NTRK3Q16288 839 aa20.96■□□□□ 0.95
VRK3-225ENST00000601912 IFFO2Q5TF58 517 aa20.96■□□□□ 0.95
VRK3-225ENST00000601912 MAP3K14Q99558 947 aa20.96■□□□□ 0.95
VRK3-225ENST00000601912 TMEM47Q9BQJ4 181 aa20.96■□□□□ 0.95
VRK3-225ENST00000601912 TMEM39BQ9GZU3 492 aa20.96■□□□□ 0.95
VRK3-225ENST00000601912 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.96■□□□□ 0.95
VRK3-225ENST00000601912 MTMR4Q9NYA4 1195 aa20.96■□□□□ 0.95
VRK3-225ENST00000601912 MTMR6Q9Y217 621 aa20.96■□□□□ 0.95
VRK3-225ENST00000601912 FAM196BA6NMK8 535 aa20.95■□□□□ 0.94
VRK3-225ENST00000601912 LMOD1P29536 600 aaPredicted RBP20.95■□□□□ 0.94
VRK3-225ENST00000601912 NOVP48745 357 aa20.95■□□□□ 0.94
VRK3-225ENST00000601912 SSRP1Q08945 709 aaKnown RBP20.95■□□□□ 0.94
VRK3-225ENST00000601912 TRIM22Q8IYM9 498 aa20.95■□□□□ 0.94
VRK3-225ENST00000601912 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.95■□□□□ 0.94
VRK3-225ENST00000601912 SIPA1L1O43166 1804 aa20.94■□□□□ 0.94
VRK3-225ENST00000601912 IGKV6D-41A0A0C4DH26 115 aa20.94■□□□□ 0.94
VRK3-225ENST00000601912 PPFIA3O75145 1194 aa20.94■□□□□ 0.94
VRK3-225ENST00000601912 DDNO94850 711 aaPredicted RBP20.94■□□□□ 0.94
VRK3-225ENST00000601912 FDPSP14324 419 aaKnown RBP20.94■□□□□ 0.94
VRK3-225ENST00000601912 RASA3Q14644 834 aa20.94■□□□□ 0.94
VRK3-225ENST00000601912 DPY19L2Q6NUT2 758 aa20.94■□□□□ 0.94
VRK3-225ENST00000601912 CLEC17AQ6ZS10 378 aa20.94■□□□□ 0.94
VRK3-225ENST00000601912 HACL1Q9UJ83 578 aa20.94■□□□□ 0.94
VRK3-225ENST00000601912 ATP6V1DQ9Y5K8 247 aa20.94■□□□□ 0.94
VRK3-225ENST00000601912 STK36Q9NRP7 1315 aa20.93■□□□□ 0.94
VRK3-225ENST00000601912 SOCS7O14512 581 aa20.93■□□□□ 0.94
VRK3-225ENST00000601912 TBC1D12O60347 775 aa20.93■□□□□ 0.94
VRK3-225ENST00000601912 TTLL1O95922 423 aa20.93■□□□□ 0.94
VRK3-225ENST00000601912 WASF1Q92558 559 aa20.93■□□□□ 0.94
VRK3-225ENST00000601912 FMNL1O95466 1100 aaPredicted RBP20.93■□□□□ 0.94
VRK3-225ENST00000601912 F13A1P00488 732 aa20.93■□□□□ 0.94
VRK3-225ENST00000601912 SLURP2P0DP57 97 aa20.93■□□□□ 0.94
VRK3-225ENST00000601912 EPS15P42566 896 aa20.93■□□□□ 0.94
VRK3-225ENST00000601912 ABCB5Q2M3G0 1257 aa20.93■□□□□ 0.94
VRK3-225ENST00000601912 TMEM179Q6ZVK1 233 aa20.93■□□□□ 0.94
VRK3-225ENST00000601912 PHKBQ93100 1093 aa20.93■□□□□ 0.94
VRK3-225ENST00000601912 SLC26A6Q9BXS9 759 aa20.93■□□□□ 0.94
VRK3-225ENST00000601912 CABP5Q9NP86 173 aa20.93■□□□□ 0.94
VRK3-225ENST00000601912 GNAQP50148 359 aa20.92■□□□□ 0.94
VRK3-225ENST00000601912 AKAP17AQ02040 695 aaKnown RBP20.92■□□□□ 0.94
VRK3-225ENST00000601912 APOBEC3FQ8IUX4 373 aaKnown RBP20.92■□□□□ 0.94
VRK3-225ENST00000601912 KANSL2Q9H9L4 492 aa20.92■□□□□ 0.94
VRK3-225ENST00000601912 SRCAPQ6ZRS2 3230 aa20.92■□□□□ 0.94
VRK3-225ENST00000601912 ZC3H4Q9UPT8 1303 aaKnown RBP20.91■□□□□ 0.94
VRK3-225ENST00000601912 BAG4O95429 457 aaKnown RBP20.91■□□□□ 0.94
VRK3-225ENST00000601912 RGS22Q8NE09 1264 aa20.91■□□□□ 0.94
VRK3-225ENST00000601912 C8orf76Q96K31 380 aa20.91■□□□□ 0.94
VRK3-225ENST00000601912 CLIP2Q9UDT6 1046 aa20.91■□□□□ 0.94
VRK3-225ENST00000601912 GOLGA6L22H0YM25 854 aa20.9■□□□□ 0.94
VRK3-225ENST00000601912 MCM4P33991 863 aa20.9■□□□□ 0.94
VRK3-225ENST00000601912 GRM4Q14833 912 aa20.9■□□□□ 0.94
VRK3-225ENST00000601912 TMTC3Q6ZXV5 915 aa20.9■□□□□ 0.94
VRK3-225ENST00000601912 CDC37L1Q7L3B6 337 aa20.9■□□□□ 0.94
VRK3-225ENST00000601912 CCDC82Q8N4S0 544 aa20.9■□□□□ 0.94
VRK3-225ENST00000601912 TRPM4Q8TD43 1214 aa20.9■□□□□ 0.94
VRK3-225ENST00000601912 RNF26Q9BY78 433 aaPredicted RBP20.9■□□□□ 0.94
VRK3-225ENST00000601912 DEFB129Q9H1M3 183 aa20.9■□□□□ 0.94
VRK3-225ENST00000601912 PGAP2Q9UHJ9 254 aa20.9■□□□□ 0.94
VRK3-225ENST00000601912 DEXIO95424 95 aa20.89■□□□□ 0.94
VRK3-225ENST00000601912 ANGEL2Q5VTE6 544 aaKnown RBP20.89■□□□□ 0.94
VRK3-225ENST00000601912 NBPF11Q86T75 865 aa20.89■□□□□ 0.94
VRK3-225ENST00000601912 CMTR1Q8N1G2 835 aaKnown RBP20.89■□□□□ 0.94
VRK3-225ENST00000601912 ALG1Q9BT22 464 aa20.89■□□□□ 0.94
VRK3-225ENST00000601912 ADARB2Q9NS39 739 aaKnown RBP20.89■□□□□ 0.94
VRK3-225ENST00000601912 ASTN2O75129 1339 aaPredicted RBP20.89■□□□□ 0.93
VRK3-225ENST00000601912 GDF11O95390 407 aa20.89■□□□□ 0.93
VRK3-225ENST00000601912 ATP2B2Q01814 1243 aa20.89■□□□□ 0.93
VRK3-225ENST00000601912 NBR1Q14596 966 aa20.89■□□□□ 0.93
VRK3-225ENST00000601912 MTMR7Q9Y216 660 aa20.89■□□□□ 0.93
VRK3-225ENST00000601912 DDX11L8A8MPP1 907 aa20.88■□□□□ 0.93
VRK3-225ENST00000601912 PLEKHA8P1O95397 391 aa20.88■□□□□ 0.93
VRK3-225ENST00000601912 PARP1P09874 1014 aaKnown RBP20.88■□□□□ 0.93
VRK3-225ENST00000601912 FOSBP53539 338 aa20.88■□□□□ 0.93
VRK3-225ENST00000601912 MAP3K10Q02779 954 aa20.88■□□□□ 0.93
VRK3-225ENST00000601912 TRIM29Q14134 588 aa20.88■□□□□ 0.93
VRK3-225ENST00000601912 MIGA2Q7L4E1 593 aa20.88■□□□□ 0.93
VRK3-225ENST00000601912 HOOK2Q96ED9 719 aa20.88■□□□□ 0.93
VRK3-225ENST00000601912 LZTS2Q9BRK4 669 aa20.88■□□□□ 0.93
VRK3-225ENST00000601912 NYAP2Q9P242 653 aa20.88■□□□□ 0.93
VRK3-225ENST00000601912 UTRNP46939 3433 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms