RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 USP17L18D6R9N7 530 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 USP17L22D6RA61 530 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 USP17L17D6RBQ6 530 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 USP17L19D6RCP7 530 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 USP17L20D6RJB6 530 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 GNAT2P19087 354 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 CDK8P49336 464 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 FLT3LGP49771 235 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 HERVK_113P62684 666 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 USP17L24Q0WX57 530 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 SBK1Q52WX2 424 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 C16orf86Q6ZW13 317 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 SLC44A5Q8NCS7 719 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 SLAIN1Q8ND83 568 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 GPRC5AQ8NFJ5 357 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 PXYLP1Q8TE99 480 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 COA7Q96BR5 231 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 FEZ1Q99689 392 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 RWDD1Q9H446 243 aaPredicted RBP12.63□□□□□ -0.39
CCDC9-203ENST00000596938 RBPJLQ9UBG7 517 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 GABRQQ9UN88 632 aa12.63□□□□□ -0.39
CCDC9-203ENST00000596938 PHIPQ8WWQ0 1821 aa12.62□□□□□ -0.39
CCDC9-203ENST00000596938 MKI67P46013 3256 aaKnown RBP12.62□□□□□ -0.39
CCDC9-203ENST00000596938 CYP2D7A0A087X1C5 515 aa12.62□□□□□ -0.39
CCDC9-203ENST00000596938 PATL2C9JE40 543 aaKnown RBP12.62□□□□□ -0.39
CCDC9-203ENST00000596938 MPHOSPH10O00566 681 aaKnown RBP12.62□□□□□ -0.39
CCDC9-203ENST00000596938 EN2P19622 333 aaPredicted RBP12.62□□□□□ -0.39
CCDC9-203ENST00000596938 CATSPERGQ6ZRH7 1159 aa12.62□□□□□ -0.39
CCDC9-203ENST00000596938 TICAM2Q86XR7 235 aa12.62□□□□□ -0.39
CCDC9-203ENST00000596938 SIAH1Q8IUQ4 282 aa12.62□□□□□ -0.39
CCDC9-203ENST00000596938 ARPP21Q9UBL0 812 aaPredicted RBP12.62□□□□□ -0.39
CCDC9-203ENST00000596938 GJD2Q9UKL4 321 aa12.62□□□□□ -0.39
CCDC9-203ENST00000596938 FOCADQ5VW36 1801 aa12.62□□□□□ -0.39
CCDC9-203ENST00000596938 A0A1W2PRG0 241 aa12.61□□□□□ -0.39
CCDC9-203ENST00000596938 SMIM22K7EJ46 135 aa12.61□□□□□ -0.39
CCDC9-203ENST00000596938 GPAA1O43292 621 aa12.61□□□□□ -0.39
CCDC9-203ENST00000596938 ADCY3O60266 1144 aa12.61□□□□□ -0.39
CCDC9-203ENST00000596938 VCAM1P19320 739 aa12.61□□□□□ -0.39
CCDC9-203ENST00000596938 PDE1AP54750 535 aa12.61□□□□□ -0.39
CCDC9-203ENST00000596938 ZYXQ15942 572 aaKnown RBP12.61□□□□□ -0.39
CCDC9-203ENST00000596938 POTEEQ6S8J3 1075 aa12.61□□□□□ -0.39
CCDC9-203ENST00000596938 LBX2Q6XYB7 198 aa12.61□□□□□ -0.39
CCDC9-203ENST00000596938 SMC5Q8IY18 1101 aa12.61□□□□□ -0.39
CCDC9-203ENST00000596938 TXNRD2Q9NNW7 524 aa12.61□□□□□ -0.39
CCDC9-203ENST00000596938 TMX2Q9Y320 296 aa12.61□□□□□ -0.39
CCDC9-203ENST00000596938 RABGAP1Q9Y3P9 1069 aa12.61□□□□□ -0.39
CCDC9-203ENST00000596938 AKR1B1P15121 316 aa12.6□□□□□ -0.39
CCDC9-203ENST00000596938 UBXN2AP68543 259 aa12.6□□□□□ -0.39
CCDC9-203ENST00000596938 Q3C1V9 767 aa12.6□□□□□ -0.39
CCDC9-203ENST00000596938 ZMYM1Q5SVZ6 1142 aa12.6□□□□□ -0.39
CCDC9-203ENST00000596938 EXOC6Q8TAG9 804 aa12.6□□□□□ -0.39
CCDC9-203ENST00000596938 EVI5LQ96CN4 794 aa12.6□□□□□ -0.39
CCDC9-203ENST00000596938 FSD1Q9BTV5 496 aa12.6□□□□□ -0.39
CCDC9-203ENST00000596938 KANSL2Q9H9L4 492 aa12.6□□□□□ -0.39
CCDC9-203ENST00000596938 HOXC10Q9NYD6 342 aa12.6□□□□□ -0.39
CCDC9-203ENST00000596938 BIN2Q9UBW5 565 aaPredicted RBP12.6□□□□□ -0.39
CCDC9-203ENST00000596938 CDK5RAP2Q96SN8 1893 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 M0R2C6 588 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 IGHDP01880 384 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 APPP05067 770 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 GJB1P08034 283 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 CAPN2P17655 700 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 MAPK4P31152 587 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 ERVK-9P63128 1117 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 ERVK-24P63145 666 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 MTFR1Q15390 333 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 NKX2-3Q8TAU0 364 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 LPAR1Q92633 364 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 NACAP1Q9BZK3 213 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 RPAP3Q9H6T3 665 aaPredicted RBP12.59□□□□□ -0.39
CCDC9-203ENST00000596938 SH2D4AQ9H788 454 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 ARHGEF10LQ9HCE6 1279 aa12.59□□□□□ -0.39
CCDC9-203ENST00000596938 SUPT16HQ9Y5B9 1047 aaKnown RBP12.59□□□□□ -0.39
CCDC9-203ENST00000596938 PEX10O60683 326 aa12.58□□□□□ -0.4
CCDC9-203ENST00000596938 MYCP01106 439 aaPredicted RBP12.58□□□□□ -0.4
CCDC9-203ENST00000596938 XRCC5P13010 732 aaKnown RBP12.58□□□□□ -0.4
CCDC9-203ENST00000596938 CCL5P13501 91 aa12.58□□□□□ -0.4
CCDC9-203ENST00000596938 NUCB1Q02818 461 aa12.58□□□□□ -0.4
CCDC9-203ENST00000596938 ICA1Q05084 483 aa12.58□□□□□ -0.4
CCDC9-203ENST00000596938 COG2Q14746 738 aa12.58□□□□□ -0.4
CCDC9-203ENST00000596938 IFNL3Q8IZI9 196 aa12.58□□□□□ -0.4
CCDC9-203ENST00000596938 SEC62Q99442 399 aaKnown RBP12.58□□□□□ -0.4
CCDC9-203ENST00000596938 MKNK2Q9HBH9 465 aa12.58□□□□□ -0.4
CCDC9-203ENST00000596938 ZNF287Q9HBT7 754 aa12.58□□□□□ -0.4
CCDC9-203ENST00000596938 EPB41L4AQ9HCS5 686 aaPredicted RBP12.58□□□□□ -0.4
CCDC9-203ENST00000596938 PTPRFP10586 1907 aa12.58□□□□□ -0.4
CCDC9-203ENST00000596938 LOC285556D6RIA3 1793 aa12.58□□□□□ -0.4
CCDC9-203ENST00000596938 DDX60LQ5H9U9 1706 aaKnown RBP12.57□□□□□ -0.4
CCDC9-203ENST00000596938 MYH1P12882 1939 aa12.57□□□□□ -0.4
CCDC9-203ENST00000596938 MINDY4BA8MYZ0 360 aa12.57□□□□□ -0.4
CCDC9-203ENST00000596938 CNMDO75829 334 aa12.57□□□□□ -0.4
CCDC9-203ENST00000596938 EEF2P13639 858 aaKnown RBP12.57□□□□□ -0.4
CCDC9-203ENST00000596938 ELNP15502 786 aa12.57□□□□□ -0.4
CCDC9-203ENST00000596938 RASA1P20936 1047 aa12.57□□□□□ -0.4
CCDC9-203ENST00000596938 GJA8P48165 433 aa12.57□□□□□ -0.4
CCDC9-203ENST00000596938 TDO2P48775 406 aa12.57□□□□□ -0.4
CCDC9-203ENST00000596938 CCNA1P78396 465 aa12.57□□□□□ -0.4
CCDC9-203ENST00000596938 KIAA1755Q5JYT7 1200 aa12.57□□□□□ -0.4
CCDC9-203ENST00000596938 CHD1LQ86WJ1 897 aa12.57□□□□□ -0.4
CCDC9-203ENST00000596938 CCAR1Q8IX12 1150 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms