RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 PLEKHM2Q8IWE5 1019 aa22.17■■□□□ 1.14
SHKBP1-202ENST00000593764 AMOTL1Q8IY63 956 aa22.17■■□□□ 1.14
SHKBP1-202ENST00000593764 ANKRD13CQ8N6S4 541 aa22.17■■□□□ 1.14
SHKBP1-202ENST00000593764 C12orf42Q96LP6 360 aa22.17■■□□□ 1.14
SHKBP1-202ENST00000593764 ARPP21Q9UBL0 812 aaPredicted RBP22.17■■□□□ 1.14
SHKBP1-202ENST00000593764 BRCA2P51587 3418 aa22.17■■□□□ 1.14
SHKBP1-202ENST00000593764 PATL2C9JE40 543 aaKnown RBP22.16■■□□□ 1.14
SHKBP1-202ENST00000593764 MPHOSPH10O00566 681 aaKnown RBP22.16■■□□□ 1.14
SHKBP1-202ENST00000593764 FMNL1O95466 1100 aaPredicted RBP22.16■■□□□ 1.14
SHKBP1-202ENST00000593764 AKR1B1P15121 316 aa22.16■■□□□ 1.14
SHKBP1-202ENST00000593764 SOX10P56693 466 aa22.16■■□□□ 1.14
SHKBP1-202ENST00000593764 SIAH1Q8IUQ4 282 aa22.16■■□□□ 1.14
SHKBP1-202ENST00000593764 ARMC5Q96C12 935 aa22.16■■□□□ 1.14
SHKBP1-202ENST00000593764 P2RX7Q99572 595 aaKnown RBP22.16■■□□□ 1.14
SHKBP1-202ENST00000593764 SRRDQ9UH36 339 aa22.16■■□□□ 1.14
SHKBP1-202ENST00000593764 A0A1W2PRG0 241 aa22.15■■□□□ 1.14
SHKBP1-202ENST00000593764 GCLCP48506 637 aaPredicted RBP22.15■■□□□ 1.14
SHKBP1-202ENST00000593764 ZYXQ15942 572 aaKnown RBP22.15■■□□□ 1.14
SHKBP1-202ENST00000593764 FAM110CQ1W6H9 321 aa22.15■■□□□ 1.14
SHKBP1-202ENST00000593764 TMEM179Q6ZVK1 233 aa22.15■■□□□ 1.14
SHKBP1-202ENST00000593764 CCDC17Q96LX7 622 aa22.15■■□□□ 1.14
SHKBP1-202ENST00000593764 OSBPL3Q9H4L5 887 aa22.15■■□□□ 1.14
SHKBP1-202ENST00000593764 USP14P54578 494 aa22.14■■□□□ 1.13
SHKBP1-202ENST00000593764 PRMT2P55345 433 aa22.14■■□□□ 1.13
SHKBP1-202ENST00000593764 IRX3P78415 501 aaPredicted RBP22.14■■□□□ 1.13
SHKBP1-202ENST00000593764 POTEEQ6S8J3 1075 aa22.14■■□□□ 1.13
SHKBP1-202ENST00000593764 IFNL3Q8IZI9 196 aa22.14■■□□□ 1.13
SHKBP1-202ENST00000593764 FEZ1Q99689 392 aa22.14■■□□□ 1.13
SHKBP1-202ENST00000593764 FOXP2O15409 715 aa22.13■■□□□ 1.13
SHKBP1-202ENST00000593764 HOXD10P28358 340 aa22.13■■□□□ 1.13
SHKBP1-202ENST00000593764 FCGRTP55899 365 aa22.13■■□□□ 1.13
SHKBP1-202ENST00000593764 MINDY4BA8MYZ0 360 aa22.12■■□□□ 1.13
SHKBP1-202ENST00000593764 APPP05067 770 aa22.12■■□□□ 1.13
SHKBP1-202ENST00000593764 HERVK_113P62684 666 aa22.12■■□□□ 1.13
SHKBP1-202ENST00000593764 CCDC129Q6ZRS4 1044 aa22.12■■□□□ 1.13
SHKBP1-202ENST00000593764 CLEC10AQ8IUN9 316 aa22.12■■□□□ 1.13
SHKBP1-202ENST00000593764 MORF4L1Q9UBU8 362 aa22.12■■□□□ 1.13
SHKBP1-202ENST00000593764 ROBO3Q96MS0 1386 aa22.12■■□□□ 1.13
SHKBP1-202ENST00000593764 MGAMO43451 1857 aa22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 DOCK3Q8IZD9 2030 aa22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 PEX10O60683 326 aa22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 VCAM1P19320 739 aa22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 TDO2P48775 406 aa22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 SLC9C1Q4G0N8 1177 aa22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 CATSPERGQ6ZRH7 1159 aa22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 TICAM2Q86XR7 235 aa22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 ZNF333Q96JL9 665 aa22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 TXNRD2Q9NNW7 524 aa22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 RBPJLQ9UBG7 517 aa22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 GABRQQ9UN88 632 aa22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 MYH8P13535 1937 aa22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 KIAA0100Q14667 2235 aaKnown RBP22.11■■□□□ 1.13
SHKBP1-202ENST00000593764 MYPNQ86TC9 1320 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 USP17L15C9J2P7 530 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 USP17L13C9JLJ4 530 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 USP17L11C9JVI0 530 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 USP17L18D6R9N7 530 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 USP17L22D6RA61 530 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 USP17L17D6RBQ6 530 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 USP17L19D6RCP7 530 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 USP17L20D6RJB6 530 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 RASA1P20936 1047 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 PRKCZQ05513 592 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 USP17L24Q0WX57 530 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 KIAA1755Q5JYT7 1200 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 STK11IPQ8N1F8 1099 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 FAM227BQ96M60 508 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 HELLSQ9NRZ9 838 aa22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 MKI67P46013 3256 aaKnown RBP22.1■■□□□ 1.13
SHKBP1-202ENST00000593764 ICA1Q05084 483 aa22.09■■□□□ 1.13
SHKBP1-202ENST00000593764 NBPF11Q86T75 865 aa22.09■■□□□ 1.13
SHKBP1-202ENST00000593764 SH3TC2Q8TF17 1288 aa22.09■■□□□ 1.13
SHKBP1-202ENST00000593764 NACAP1Q9BZK3 213 aa22.09■■□□□ 1.13
SHKBP1-202ENST00000593764 TMX2Q9Y320 296 aa22.09■■□□□ 1.13
SHKBP1-202ENST00000593764 A0A0D9SFI3 127 aa22.08■■□□□ 1.13
SHKBP1-202ENST00000593764 TRIM6-TRIM34B2RNG4 842 aa22.08■■□□□ 1.13
SHKBP1-202ENST00000593764 TNPO2O14787 897 aaKnown RBP22.08■■□□□ 1.13
SHKBP1-202ENST00000593764 Q3C1V9 767 aa22.08■■□□□ 1.13
SHKBP1-202ENST00000593764 VPS53Q5VIR6 699 aa22.08■■□□□ 1.13
SHKBP1-202ENST00000593764 RAET1EQ8TD07 263 aa22.08■■□□□ 1.13
SHKBP1-202ENST00000593764 RILPL2Q969X0 211 aa22.08■■□□□ 1.13
SHKBP1-202ENST00000593764 RPAP3Q9H6T3 665 aaPredicted RBP22.08■■□□□ 1.13
SHKBP1-202ENST00000593764 KANSL2Q9H9L4 492 aa22.08■■□□□ 1.13
SHKBP1-202ENST00000593764 MKNK2Q9HBH9 465 aa22.08■■□□□ 1.13
SHKBP1-202ENST00000593764 EEF2P13639 858 aaKnown RBP22.07■■□□□ 1.12
SHKBP1-202ENST00000593764 PDE4AP27815 886 aa22.07■■□□□ 1.12
SHKBP1-202ENST00000593764 FLT3LGP49771 235 aa22.07■■□□□ 1.12
SHKBP1-202ENST00000593764 MLLT1Q03111 559 aaPredicted RBP22.07■■□□□ 1.12
SHKBP1-202ENST00000593764 GPRC5AQ8NFJ5 357 aa22.07■■□□□ 1.12
SHKBP1-202ENST00000593764 NAPBQ9H115 298 aa22.07■■□□□ 1.12
SHKBP1-202ENST00000593764 ARHGEF10LQ9HCE6 1279 aa22.07■■□□□ 1.12
SHKBP1-202ENST00000593764 POTEFA5A3E0 1075 aa22.06■■□□□ 1.12
SHKBP1-202ENST00000593764 NMIQ13287 307 aaPredicted RBP22.06■■□□□ 1.12
SHKBP1-202ENST00000593764 MCMDC2Q4G0Z9 681 aa22.06■■□□□ 1.12
SHKBP1-202ENST00000593764 GTF3C2Q8WUA4 911 aaPredicted RBP22.06■■□□□ 1.12
SHKBP1-202ENST00000593764 GJD2Q9UKL4 321 aa22.06■■□□□ 1.12
SHKBP1-202ENST00000593764 TNRC18O15417 2968 aaPredicted RBP22.06■■□□□ 1.12
SHKBP1-202ENST00000593764 PRDM1O75626 825 aa22.05■■□□□ 1.12
SHKBP1-202ENST00000593764 CNMDO75829 334 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms