RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 AS3MTQ9HBK9 375 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 MTMR4Q9NYA4 1195 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 NYAP2Q9P242 653 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 ZBTB21Q9ULJ3 1066 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 PLIN4Q96Q06 1357 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 POLR2AP24928 1970 aaKnown RBP12.54□□□□□ -0.4
SMAD4-214ENST00000592186 IGKV6D-41A0A0C4DH26 115 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 GDF11O95390 407 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 TTLL1O95922 423 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 PTPRAP18433 802 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 LIFRP42702 1097 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 NOVP48745 357 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 NEK4P51957 841 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 FMR1Q06787 632 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMAD4-214ENST00000592186 VGLL4Q14135 290 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 RRP1BQ14684 758 aaKnown RBP12.54□□□□□ -0.4
SMAD4-214ENST00000592186 SEPT2Q15019 361 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 CYB5R4Q7L1T6 521 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 ERO1BQ86YB8 467 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 MKL1Q969V6 931 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 HHIPL1Q96JK4 782 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 KIF2CQ99661 725 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 WDR18Q9BV38 432 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMAD4-214ENST00000592186 ARHGEF10LQ9HCE6 1279 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 IL17RBQ9NRM6 502 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 PDRG1Q9NUG6 133 aa12.54□□□□□ -0.4
SMAD4-214ENST00000592186 ST18O60284 1047 aa12.53□□□□□ -0.4
SMAD4-214ENST00000592186 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
SMAD4-214ENST00000592186 GUCY1A2P33402 732 aa12.53□□□□□ -0.4
SMAD4-214ENST00000592186 ICA1Q05084 483 aa12.53□□□□□ -0.4
SMAD4-214ENST00000592186 PPATQ06203 517 aa12.53□□□□□ -0.4
SMAD4-214ENST00000592186 WTAPQ15007 396 aa12.53□□□□□ -0.4
SMAD4-214ENST00000592186 TMEM67Q5HYA8 995 aa12.53□□□□□ -0.4
SMAD4-214ENST00000592186 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
SMAD4-214ENST00000592186 CEP95Q96GE4 821 aa12.53□□□□□ -0.4
SMAD4-214ENST00000592186 CLIP2Q9UDT6 1046 aa12.53□□□□□ -0.4
SMAD4-214ENST00000592186 STX8Q9UNK0 236 aa12.53□□□□□ -0.4
SMAD4-214ENST00000592186 ZHX2Q9Y6X8 837 aa12.53□□□□□ -0.4
SMAD4-214ENST00000592186 LAMB1P07942 1786 aa12.52□□□□□ -0.4
SMAD4-214ENST00000592186 LAMA4Q16363 1823 aa12.52□□□□□ -0.4
SMAD4-214ENST00000592186 SPDYE5A6NIY4 337 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 C19orf81C9J6K1 198 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 TOP1P11387 765 aaKnown RBP12.52□□□□□ -0.41
SMAD4-214ENST00000592186 EEF2P13639 858 aaKnown RBP12.52□□□□□ -0.41
SMAD4-214ENST00000592186 MCM2P49736 904 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 APLP1P51693 650 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 HUNKP57058 714 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 ANTXR2P58335 489 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 JAG1P78504 1218 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 SEC23AQ15436 765 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 IFIT1BQ5T764 474 aaKnown RBP12.52□□□□□ -0.41
SMAD4-214ENST00000592186 SYNE3Q6ZMZ3 975 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 MOB2Q70IA6 237 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 CHST3Q7LGC8 479 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 SAPCD2Q86UD0 394 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 ENAHQ8N8S7 591 aaPredicted RBP12.52□□□□□ -0.41
SMAD4-214ENST00000592186 ZNF280CQ8ND82 737 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 CCDC102AQ96A19 550 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 ZKSCAN3Q9BRR0 538 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 UPF3BQ9BZI7 483 aaKnown RBP12.52□□□□□ -0.41
SMAD4-214ENST00000592186 KAT14Q9H8E8 782 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 FZD1Q9UP38 647 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 SNCAIPQ9Y6H5 919 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 TLL2Q9Y6L7 1015 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 TNKSO95271 1327 aa12.52□□□□□ -0.41
SMAD4-214ENST00000592186 USP17L10C9JJH3 530 aa12.51□□□□□ -0.41
SMAD4-214ENST00000592186 CXCL11O14625 94 aa12.51□□□□□ -0.41
SMAD4-214ENST00000592186 USP14P54578 494 aa12.51□□□□□ -0.41
SMAD4-214ENST00000592186 RCSD1Q6JBY9 416 aa12.51□□□□□ -0.41
SMAD4-214ENST00000592186 NFXL1Q6ZNB6 911 aa12.51□□□□□ -0.41
SMAD4-214ENST00000592186 Q6ZUG5 572 aa12.51□□□□□ -0.41
SMAD4-214ENST00000592186 SGMS1Q86VZ5 419 aa12.51□□□□□ -0.41
SMAD4-214ENST00000592186 SIAH1Q8IUQ4 282 aa12.51□□□□□ -0.41
SMAD4-214ENST00000592186 AGXT2Q9BYV1 514 aa12.51□□□□□ -0.41
SMAD4-214ENST00000592186 KIAA1683Q9H0B3 1180 aa12.51□□□□□ -0.41
SMAD4-214ENST00000592186 ELP3Q9H9T3 547 aa12.51□□□□□ -0.41
SMAD4-214ENST00000592186 CREBZFQ9NS37 354 aa12.51□□□□□ -0.41
SMAD4-214ENST00000592186 TMX2Q9Y320 296 aa12.51□□□□□ -0.41
SMAD4-214ENST00000592186 PAPPA2Q9BXP8 1791 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 CCDC69A6NI79 296 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 SH2B2O14492 632 aaPredicted RBP12.5□□□□□ -0.41
SMAD4-214ENST00000592186 NMT2O60551 498 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 CALM1P0DP23 149 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 CALM2P0DP24 149 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 CALM3P0DP25 149 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 ZBTB48P10074 688 aaPredicted RBP12.5□□□□□ -0.41
SMAD4-214ENST00000592186 CPA1P15085 419 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 BACE1P56817 501 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 EVCP57679 992 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 ATP2B2Q01814 1243 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 SPP2Q13103 211 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 PPIL2Q13356 520 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 PPP2R5BQ15173 497 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 RGMBQ6NW40 437 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 CATIPQ7Z7H3 387 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 CHMP4CQ96CF2 233 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 CLMNQ96JQ2 1002 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 TMEM47Q9BQJ4 181 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 LY9Q9HBG7 655 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms