RNA–Protein interactions for RNA: ENST00000591474.5

CXXC1-216, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-216ENST00000591474 USP17L22D6RA61 530 aa27.42■■□□□ 1.98
CXXC1-216ENST00000591474 USP17L17D6RBQ6 530 aa27.42■■□□□ 1.98
CXXC1-216ENST00000591474 USP17L19D6RCP7 530 aa27.42■■□□□ 1.98
CXXC1-216ENST00000591474 USP17L20D6RJB6 530 aa27.42■■□□□ 1.98
CXXC1-216ENST00000591474 USP14P54578 494 aa27.42■■□□□ 1.98
CXXC1-216ENST00000591474 USP17L24Q0WX57 530 aa27.42■■□□□ 1.98
CXXC1-216ENST00000591474 TTC6Q86TZ1 520 aa27.42■■□□□ 1.98
CXXC1-216ENST00000591474 ERC1Q8IUD2 1116 aa27.42■■□□□ 1.98
CXXC1-216ENST00000591474 FEZ1Q99689 392 aa27.42■■□□□ 1.98
CXXC1-216ENST00000591474 ZMYND8Q9ULU4 1186 aaPredicted RBP27.42■■□□□ 1.98
CXXC1-216ENST00000591474 PFASO15067 1338 aa27.41■■□□□ 1.98
CXXC1-216ENST00000591474 CNMDO75829 334 aa27.41■■□□□ 1.98
CXXC1-216ENST00000591474 ZYXQ15942 572 aaKnown RBP27.41■■□□□ 1.98
CXXC1-216ENST00000591474 CERKLQ49MI3 558 aaPredicted RBP27.41■■□□□ 1.98
CXXC1-216ENST00000591474 KIAA1683Q9H0B3 1180 aa27.41■■□□□ 1.98
CXXC1-216ENST00000591474 RAB3GAP1Q15042 981 aa27.4■■□□□ 1.98
CXXC1-216ENST00000591474 CCL14Q16627 93 aa27.4■■□□□ 1.98
CXXC1-216ENST00000591474 CATSPERGQ6ZRH7 1159 aa27.4■■□□□ 1.98
CXXC1-216ENST00000591474 LRCH3Q96II8 777 aa27.4■■□□□ 1.98
CXXC1-216ENST00000591474 RIOK1Q9BRS2 568 aaKnown RBP27.4■■□□□ 1.98
CXXC1-216ENST00000591474 COL6A3P12111 3177 aa27.4■■□□□ 1.98
CXXC1-216ENST00000591474 NAV1Q8NEY1 1877 aa27.39■■□□□ 1.98
CXXC1-216ENST00000591474 VCAM1P19320 739 aa27.39■■□□□ 1.98
CXXC1-216ENST00000591474 CCNA1P78396 465 aa27.39■■□□□ 1.98
CXXC1-216ENST00000591474 MAP2K5Q13163 448 aa27.39■■□□□ 1.98
CXXC1-216ENST00000591474 ABCB5Q2M3G0 1257 aa27.39■■□□□ 1.98
CXXC1-216ENST00000591474 LBX2Q6XYB7 198 aa27.39■■□□□ 1.98
CXXC1-216ENST00000591474 AACSQ86V21 672 aa27.39■■□□□ 1.98
CXXC1-216ENST00000591474 EXOC6BQ9Y2D4 811 aa27.39■■□□□ 1.98
CXXC1-216ENST00000591474 COL6A1P12109 1028 aa27.38■■□□□ 1.97
CXXC1-216ENST00000591474 CCND3P30281 292 aaPredicted RBP27.38■■□□□ 1.97
CXXC1-216ENST00000591474 LHX8Q68G74 356 aa27.38■■□□□ 1.97
CXXC1-216ENST00000591474 CWC22Q9HCG8 908 aaKnown RBP27.38■■□□□ 1.97
CXXC1-216ENST00000591474 FRMPD3Q5JV73 1810 aa27.38■■□□□ 1.97
CXXC1-216ENST00000591474 GLRX3O76003 335 aaKnown RBP27.37■■□□□ 1.97
CXXC1-216ENST00000591474 SHMT1P34896 483 aa27.37■■□□□ 1.97
CXXC1-216ENST00000591474 PLCD1P51178 756 aa27.37■■□□□ 1.97
CXXC1-216ENST00000591474 HNRNPUQ00839 825 aaKnown RBP eCLIP27.37■■□□□ 1.97
CXXC1-216ENST00000591474 ACER1Q8TDN7 264 aa27.37■■□□□ 1.97
CXXC1-216ENST00000591474 CABP5Q9NP86 173 aa27.37■■□□□ 1.97
CXXC1-216ENST00000591474 SYN1P17600 705 aa27.36■■□□□ 1.97
CXXC1-216ENST00000591474 GPR153Q6NV75 609 aa27.36■■□□□ 1.97
CXXC1-216ENST00000591474 MAGEA10P43363 369 aaPredicted RBP27.35■■□□□ 1.97
CXXC1-216ENST00000591474 GABPAQ06546 454 aa27.35■■□□□ 1.97
CXXC1-216ENST00000591474 TTF1Q15361 905 aaPredicted RBP27.35■■□□□ 1.97
CXXC1-216ENST00000591474 HSP90AB4PQ58FF6 505 aa27.35■■□□□ 1.97
CXXC1-216ENST00000591474 EDC3Q96F86 508 aaKnown RBP27.35■■□□□ 1.97
CXXC1-216ENST00000591474 SLC15A5A6NIM6 579 aa27.34■■□□□ 1.97
CXXC1-216ENST00000591474 PTPREP23469 700 aa27.34■■□□□ 1.97
CXXC1-216ENST00000591474 GUCY1A2P33402 732 aa27.34■■□□□ 1.97
CXXC1-216ENST00000591474 BTBD7Q9P203 1132 aa27.34■■□□□ 1.97
CXXC1-216ENST00000591474 MAGEB6P1A0A0J9YX57 407 aa27.33■■□□□ 1.97
CXXC1-216ENST00000591474 SPDYE16A6NNV3 312 aaPredicted RBP27.33■■□□□ 1.97
CXXC1-216ENST00000591474 POLR3DP05423 398 aaPredicted RBP27.33■■□□□ 1.97
CXXC1-216ENST00000591474 HOXC6P09630 235 aa27.33■■□□□ 1.97
CXXC1-216ENST00000591474 LRIT3Q3SXY7 679 aa27.33■■□□□ 1.97
CXXC1-216ENST00000591474 MFSD14CQ5VZR4 134 aa27.33■■□□□ 1.97
CXXC1-216ENST00000591474 RHPN1Q8TCX5 695 aa27.33■■□□□ 1.97
CXXC1-216ENST00000591474 RPAP3Q9H6T3 665 aaPredicted RBP27.33■■□□□ 1.97
CXXC1-216ENST00000591474 PDE6AP16499 860 aa27.32■■□□□ 1.96
CXXC1-216ENST00000591474 GRB14Q14449 540 aa27.32■■□□□ 1.96
CXXC1-216ENST00000591474 WDR78Q5VTH9 848 aa27.32■■□□□ 1.96
CXXC1-216ENST00000591474 TDHQ8IZJ6 230 aa27.32■■□□□ 1.96
CXXC1-216ENST00000591474 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.32■■□□□ 1.96
CXXC1-216ENST00000591474 CRNKL1Q9BZJ0 848 aaKnown RBP27.32■■□□□ 1.96
CXXC1-216ENST00000591474 IL1RAPL2Q9NP60 686 aa27.32■■□□□ 1.96
CXXC1-216ENST00000591474 FLRT1Q9NZU1 646 aa27.32■■□□□ 1.96
CXXC1-216ENST00000591474 SEPT2Q15019 361 aa27.31■■□□□ 1.96
CXXC1-216ENST00000591474 SLC9C2Q5TAH2 1124 aa27.31■■□□□ 1.96
CXXC1-216ENST00000591474 IVNS1ABPQ9Y6Y0 642 aa27.31■■□□□ 1.96
CXXC1-216ENST00000591474 LRRC26Q2I0M4 334 aa27.3■■□□□ 1.96
CXXC1-216ENST00000591474 PANK1Q8TE04 598 aa27.3■■□□□ 1.96
CXXC1-216ENST00000591474 ZNF236Q9UL36 1845 aa27.3■■□□□ 1.96
CXXC1-216ENST00000591474 DNAH12Q6ZR08 3092 aa27.29■■□□□ 1.96
CXXC1-216ENST00000591474 MCM9Q9NXL9 1143 aa27.29■■□□□ 1.96
CXXC1-216ENST00000591474 A0A0G2JMZ2 1700 aa27.28■■□□□ 1.96
CXXC1-216ENST00000591474 ZNF532Q9HCE3 1301 aa27.28■■□□□ 1.96
CXXC1-216ENST00000591474 TCRBV5S4A2TA0A5A2 114 aa27.28■■□□□ 1.96
CXXC1-216ENST00000591474 MSCO60682 206 aa27.28■■□□□ 1.96
CXXC1-216ENST00000591474 EVX2Q03828 476 aa27.28■■□□□ 1.96
CXXC1-216ENST00000591474 CLASRPQ8N2M8 674 aaKnown RBP27.28■■□□□ 1.96
CXXC1-216ENST00000591474 NPLOC4Q8TAT6 608 aa27.28■■□□□ 1.96
CXXC1-216ENST00000591474 KIF1BPQ96EK5 621 aa27.28■■□□□ 1.96
CXXC1-216ENST00000591474 UBE2OQ9C0C9 1292 aaKnown RBP27.28■■□□□ 1.96
CXXC1-216ENST00000591474 DDX20Q9UHI6 824 aaKnown RBP27.28■■□□□ 1.96
CXXC1-216ENST00000591474 RLFQ13129 1914 aa27.28■■□□□ 1.96
CXXC1-216ENST00000591474 A0A1W2PRG0 241 aa27.27■■□□□ 1.96
CXXC1-216ENST00000591474 IGHA2P01877 340 aa27.27■■□□□ 1.96
CXXC1-216ENST00000591474 ATP2B2Q01814 1243 aa27.27■■□□□ 1.96
CXXC1-216ENST00000591474 DCP1AQ9NPI6 582 aaPredicted RBP27.27■■□□□ 1.96
CXXC1-216ENST00000591474 GOLIM4O00461 696 aa27.26■■□□□ 1.95
CXXC1-216ENST00000591474 MPHOSPH10O00566 681 aaKnown RBP27.26■■□□□ 1.95
CXXC1-216ENST00000591474 COG2Q14746 738 aa27.26■■□□□ 1.95
CXXC1-216ENST00000591474 SLC17A8Q8NDX2 589 aa27.26■■□□□ 1.95
CXXC1-216ENST00000591474 SDR42E1Q8WUS8 393 aa27.26■■□□□ 1.95
CXXC1-216ENST00000591474 LPAR1Q92633 364 aa27.26■■□□□ 1.95
CXXC1-216ENST00000591474 HOXC10Q9NYD6 342 aa27.26■■□□□ 1.95
CXXC1-216ENST00000591474 MYH8P13535 1937 aa27.26■■□□□ 1.95
CXXC1-216ENST00000591474 TMEM179Q6ZVK1 233 aa27.25■■□□□ 1.95
CXXC1-216ENST00000591474 LCORLQ8N3X6 602 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms