RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 ICA1Q05084 483 aa22.63■■□□□ 1.21
DDX39A-214ENST00000590556 TRDNQ13061 729 aa22.63■■□□□ 1.21
DDX39A-214ENST00000590556 REM2Q8IYK8 340 aaPredicted RBP22.63■■□□□ 1.21
DDX39A-214ENST00000590556 MS4A4AQ96JQ5 239 aa22.63■■□□□ 1.21
DDX39A-214ENST00000590556 KRT23Q9C075 422 aa22.63■■□□□ 1.21
DDX39A-214ENST00000590556 TAF6LQ9Y6J9 622 aa22.63■■□□□ 1.21
DDX39A-214ENST00000590556 CCL15-CCL14A0A0B4J2E2 113 aa22.62■■□□□ 1.21
DDX39A-214ENST00000590556 INHBEP58166 350 aa22.62■■□□□ 1.21
DDX39A-214ENST00000590556 ATP2B2Q01814 1243 aa22.62■■□□□ 1.21
DDX39A-214ENST00000590556 SREBF2Q12772 1141 aa22.62■■□□□ 1.21
DDX39A-214ENST00000590556 CCL15Q16663 113 aa22.62■■□□□ 1.21
DDX39A-214ENST00000590556 CLEC10AQ8IUN9 316 aa22.62■■□□□ 1.21
DDX39A-214ENST00000590556 ACER1Q8TDN7 264 aa22.62■■□□□ 1.21
DDX39A-214ENST00000590556 FEZ1Q99689 392 aa22.62■■□□□ 1.21
DDX39A-214ENST00000590556 ARHGEF10LQ9HCE6 1279 aa22.62■■□□□ 1.21
DDX39A-214ENST00000590556 GREB1LQ9C091 1923 aaPredicted RBP22.62■■□□□ 1.21
DDX39A-214ENST00000590556 PLIN4Q96Q06 1357 aa22.62■■□□□ 1.21
DDX39A-214ENST00000590556 IGKV6D-41A0A0C4DH26 115 aa22.61■■□□□ 1.21
DDX39A-214ENST00000590556 A0A0G2JLL6 359 aaPredicted RBP22.61■■□□□ 1.21
DDX39A-214ENST00000590556 B4E1Z4 1266 aa22.61■■□□□ 1.21
DDX39A-214ENST00000590556 USP17L10C9JJH3 530 aa22.61■■□□□ 1.21
DDX39A-214ENST00000590556 KDM4AO75164 1064 aa22.61■■□□□ 1.21
DDX39A-214ENST00000590556 BACE1P56817 501 aa22.61■■□□□ 1.21
DDX39A-214ENST00000590556 MTMR2Q13614 643 aa22.61■■□□□ 1.21
DDX39A-214ENST00000590556 C8orf34Q49A92 452 aa22.61■■□□□ 1.21
DDX39A-214ENST00000590556 PRRT2Q7Z6L0 340 aaPredicted RBP22.61■■□□□ 1.21
DDX39A-214ENST00000590556 USP26Q9BXU7 913 aa22.61■■□□□ 1.21
DDX39A-214ENST00000590556 TESPA1A2RU30 521 aaPredicted RBP22.6■■□□□ 1.21
DDX39A-214ENST00000590556 C19orf81C9J6K1 198 aa22.6■■□□□ 1.21
DDX39A-214ENST00000590556 EEF2P13639 858 aaKnown RBP22.6■■□□□ 1.21
DDX39A-214ENST00000590556 ZKSCAN1P17029 563 aaPredicted RBP22.6■■□□□ 1.21
DDX39A-214ENST00000590556 TM4SF4P48230 202 aa22.6■■□□□ 1.21
DDX39A-214ENST00000590556 STOX1Q6ZVD7 989 aa22.6■■□□□ 1.21
DDX39A-214ENST00000590556 RALYLQ86SE5 291 aaKnown RBP22.6■■□□□ 1.21
DDX39A-214ENST00000590556 SIAH1Q8IUQ4 282 aa22.6■■□□□ 1.21
DDX39A-214ENST00000590556 NKX2-3Q8TAU0 364 aa22.6■■□□□ 1.21
DDX39A-214ENST00000590556 BRI3BPQ8WY22 251 aa22.6■■□□□ 1.21
DDX39A-214ENST00000590556 CEP95Q96GE4 821 aa22.6■■□□□ 1.21
DDX39A-214ENST00000590556 MTMR4Q9NYA4 1195 aa22.6■■□□□ 1.21
DDX39A-214ENST00000590556 THSD7BQ9C0I4 1608 aa22.6■■□□□ 1.21
DDX39A-214ENST00000590556 PTPRFP10586 1907 aa22.59■■□□□ 1.21
DDX39A-214ENST00000590556 HSPA4P34932 840 aa22.59■■□□□ 1.21
DDX39A-214ENST00000590556 HMGCS2P54868 508 aa22.59■■□□□ 1.21
DDX39A-214ENST00000590556 PPP4R3BQ5MIZ7 849 aa22.59■■□□□ 1.21
DDX39A-214ENST00000590556 GADL1Q6ZQY3 521 aa22.59■■□□□ 1.21
DDX39A-214ENST00000590556 FASTKD5Q7L8L6 764 aaKnown RBP22.59■■□□□ 1.21
DDX39A-214ENST00000590556 NCOA7Q8NI08 942 aa22.59■■□□□ 1.21
DDX39A-214ENST00000590556 KIAA1683Q9H0B3 1180 aa22.59■■□□□ 1.21
DDX39A-214ENST00000590556 SH2D4AQ9H788 454 aa22.59■■□□□ 1.21
DDX39A-214ENST00000590556 IL17RBQ9NRM6 502 aa22.59■■□□□ 1.21
DDX39A-214ENST00000590556 NYAP2Q9P242 653 aa22.59■■□□□ 1.21
DDX39A-214ENST00000590556 CEP350Q5VT06 3117 aa22.58■■□□□ 1.21
DDX39A-214ENST00000590556 A0A1W2PRG0 241 aa22.58■■□□□ 1.21
DDX39A-214ENST00000590556 NMT2O60551 498 aa22.58■■□□□ 1.21
DDX39A-214ENST00000590556 TTLL1O95922 423 aa22.58■■□□□ 1.21
DDX39A-214ENST00000590556 MCCP23508 829 aa22.58■■□□□ 1.21
DDX39A-214ENST00000590556 USP14P54578 494 aa22.58■■□□□ 1.21
DDX39A-214ENST00000590556 ZYXQ15942 572 aaKnown RBP22.58■■□□□ 1.21
DDX39A-214ENST00000590556 SH3D19Q5HYK7 790 aa22.58■■□□□ 1.21
DDX39A-214ENST00000590556 USP17L2Q6R6M4 530 aa22.58■■□□□ 1.21
DDX39A-214ENST00000590556 TCP11L1Q9NUJ3 509 aa22.58■■□□□ 1.21
DDX39A-214ENST00000590556 TMOD4Q9NZQ9 345 aa22.58■■□□□ 1.21
DDX39A-214ENST00000590556 ZSWIM5Q9P217 1185 aa22.58■■□□□ 1.21
DDX39A-214ENST00000590556 CLIP2Q9UDT6 1046 aa22.58■■□□□ 1.21
DDX39A-214ENST00000590556 TMX2Q9Y320 296 aa22.58■■□□□ 1.21
DDX39A-214ENST00000590556 SEC24BO95487 1268 aa22.57■■□□□ 1.2
DDX39A-214ENST00000590556 MAP2K1Q02750 393 aaPredicted RBP22.57■■□□□ 1.2
DDX39A-214ENST00000590556 MOGSQ13724 837 aa22.57■■□□□ 1.2
DDX39A-214ENST00000590556 TSGA10IPQ3SY00 556 aa22.57■■□□□ 1.2
DDX39A-214ENST00000590556 IQCA1Q86XH1 822 aa22.57■■□□□ 1.2
DDX39A-214ENST00000590556 RASEFQ8IZ41 740 aa22.57■■□□□ 1.2
DDX39A-214ENST00000590556 KCNB2Q92953 911 aa22.57■■□□□ 1.2
DDX39A-214ENST00000590556 PTPN18Q99952 460 aa22.57■■□□□ 1.2
DDX39A-214ENST00000590556 DGKZQ13574 1117 aa22.56■■□□□ 1.2
DDX39A-214ENST00000590556 KRT32Q14532 448 aa22.56■■□□□ 1.2
DDX39A-214ENST00000590556 CCDC178Q5BJE1 867 aa22.56■■□□□ 1.2
DDX39A-214ENST00000590556 OTUD7BQ6GQQ9 843 aa22.56■■□□□ 1.2
DDX39A-214ENST00000590556 IFNL1Q8IU54 200 aa22.56■■□□□ 1.2
DDX39A-214ENST00000590556 PROCA1Q8NCQ7 364 aaPredicted RBP22.56■■□□□ 1.2
DDX39A-214ENST00000590556 ZKSCAN3Q9BRR0 538 aa22.56■■□□□ 1.2
DDX39A-214ENST00000590556 EMILIN3Q9NT22 766 aa22.56■■□□□ 1.2
DDX39A-214ENST00000590556 STX8Q9UNK0 236 aa22.56■■□□□ 1.2
DDX39A-214ENST00000590556 MYH4Q9Y623 1939 aa22.55■■□□□ 1.2
DDX39A-214ENST00000590556 BTBD19C9JJ37 291 aa22.55■■□□□ 1.2
DDX39A-214ENST00000590556 IGF2BP3O00425 579 aaKnown RBP eCLIP22.55■■□□□ 1.2
DDX39A-214ENST00000590556 CYB5R4Q7L1T6 521 aa22.55■■□□□ 1.2
DDX39A-214ENST00000590556 JMYQ8N9B5 988 aa22.55■■□□□ 1.2
DDX39A-214ENST00000590556 MKL1Q969V6 931 aa22.55■■□□□ 1.2
DDX39A-214ENST00000590556 UBAC1Q9BSL1 405 aa22.55■■□□□ 1.2
DDX39A-214ENST00000590556 GPAT2Q6NUI2 795 aa22.54■■□□□ 1.2
DDX39A-214ENST00000590556 ANKRD23Q86SG2 305 aa22.54■■□□□ 1.2
DDX39A-214ENST00000590556 MB21D2Q8IYB1 491 aaPredicted RBP22.54■■□□□ 1.2
DDX39A-214ENST00000590556 C12orf42Q96LP6 360 aa22.54■■□□□ 1.2
DDX39A-214ENST00000590556 ZSCAN10Q96SZ4 725 aaPredicted RBP22.54■■□□□ 1.2
DDX39A-214ENST00000590556 GOPCQ9HD26 462 aa22.54■■□□□ 1.2
DDX39A-214ENST00000590556 SNX14Q9Y5W7 946 aa22.54■■□□□ 1.2
DDX39A-214ENST00000590556 LOC285556D6RIA3 1793 aa22.53■■□□□ 1.2
DDX39A-214ENST00000590556 NOVP48745 357 aa22.53■■□□□ 1.2
DDX39A-214ENST00000590556 FAM43AQ8N2R8 423 aa22.53■■□□□ 1.2
DDX39A-214ENST00000590556 TTC14Q96N46 770 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms