RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 ZNF287Q9HBT7 754 aa17.44■□□□□ 0.38
CXXC1-213ENST00000590234 SLC3A2P08195 630 aaKnown RBP17.43■□□□□ 0.38
CXXC1-213ENST00000590234 HSPD1P10809 573 aaKnown RBP17.43■□□□□ 0.38
CXXC1-213ENST00000590234 PABPC4Q13310 644 aaKnown RBP eCLIP17.43■□□□□ 0.38
CXXC1-213ENST00000590234 ALX1Q15699 326 aa17.43■□□□□ 0.38
CXXC1-213ENST00000590234 ERICH6BQ5W0A0 696 aa17.43■□□□□ 0.38
CXXC1-213ENST00000590234 USP17L2Q6R6M4 530 aa17.43■□□□□ 0.38
CXXC1-213ENST00000590234 TNS4Q8IZW8 715 aa17.43■□□□□ 0.38
CXXC1-213ENST00000590234 PNMA3Q9UL41 463 aa17.43■□□□□ 0.38
CXXC1-213ENST00000590234 ZMYM6O95789 1325 aa17.43■□□□□ 0.38
CXXC1-213ENST00000590234 CYP2C8P10632 490 aa17.42■□□□□ 0.38
CXXC1-213ENST00000590234 RASA1P20936 1047 aa17.42■□□□□ 0.38
CXXC1-213ENST00000590234 USP14P54578 494 aa17.42■□□□□ 0.38
CXXC1-213ENST00000590234 SP3Q02447 781 aa17.42■□□□□ 0.38
CXXC1-213ENST00000590234 ICA1Q05084 483 aa17.42■□□□□ 0.38
CXXC1-213ENST00000590234 PDE4BQ07343 736 aa17.42■□□□□ 0.38
CXXC1-213ENST00000590234 ZYXQ15942 572 aaKnown RBP17.42■□□□□ 0.38
CXXC1-213ENST00000590234 SKAP1Q86WV1 359 aa17.42■□□□□ 0.38
CXXC1-213ENST00000590234 ACER1Q8TDN7 264 aa17.42■□□□□ 0.38
CXXC1-213ENST00000590234 PRDM1O75626 825 aa17.41■□□□□ 0.38
CXXC1-213ENST00000590234 FGAP02671 866 aa17.41■□□□□ 0.38
CXXC1-213ENST00000590234 CTU1Q7Z7A3 348 aaKnown RBP17.41■□□□□ 0.38
CXXC1-213ENST00000590234 SMCR8Q8TEV9 937 aaPredicted RBP17.41■□□□□ 0.38
CXXC1-213ENST00000590234 ERO1AQ96HE7 468 aa17.41■□□□□ 0.38
CXXC1-213ENST00000590234 C12orf42Q96LP6 360 aa17.41■□□□□ 0.38
CXXC1-213ENST00000590234 KIAA1683Q9H0B3 1180 aa17.41■□□□□ 0.38
CXXC1-213ENST00000590234 EMILIN3Q9NT22 766 aa17.41■□□□□ 0.38
CXXC1-213ENST00000590234 RAD50Q92878 1312 aa17.41■□□□□ 0.38
CXXC1-213ENST00000590234 ADGRA2Q96PE1 1338 aa17.41■□□□□ 0.38
CXXC1-213ENST00000590234 GREB1LQ9C091 1923 aaPredicted RBP17.41■□□□□ 0.38
CXXC1-213ENST00000590234 OSBPP22059 807 aa17.4■□□□□ 0.38
CXXC1-213ENST00000590234 C17orf99Q6UX52 265 aa17.4■□□□□ 0.38
CXXC1-213ENST00000590234 CLEC10AQ8IUN9 316 aa17.4■□□□□ 0.38
CXXC1-213ENST00000590234 ZNF444Q8N0Y2 327 aaPredicted RBP17.4■□□□□ 0.38
CXXC1-213ENST00000590234 ARHGEF10LQ9HCE6 1279 aa17.4■□□□□ 0.38
CXXC1-213ENST00000590234 CPA4Q9UI42 421 aa17.4■□□□□ 0.38
CXXC1-213ENST00000590234 ANAPC4Q9UJX5 808 aa17.4■□□□□ 0.38
CXXC1-213ENST00000590234 A0A1W2PRG0 241 aa17.39■□□□□ 0.37
CXXC1-213ENST00000590234 CHMLP26374 656 aa17.39■□□□□ 0.37
CXXC1-213ENST00000590234 CTDSPL2Q05D32 466 aa17.39■□□□□ 0.37
CXXC1-213ENST00000590234 CD99L2Q8TCZ2 262 aa17.39■□□□□ 0.37
CXXC1-213ENST00000590234 RUFY2Q8WXA3 655 aa17.39■□□□□ 0.37
CXXC1-213ENST00000590234 SH2D4AQ9H788 454 aa17.39■□□□□ 0.37
CXXC1-213ENST00000590234 KANSL2Q9H9L4 492 aa17.39■□□□□ 0.37
CXXC1-213ENST00000590234 PPP4R2Q9NY27 417 aa17.39■□□□□ 0.37
CXXC1-213ENST00000590234 VCAM1P19320 739 aa17.38■□□□□ 0.37
CXXC1-213ENST00000590234 HOXA7P31268 230 aaPredicted RBP17.38■□□□□ 0.37
CXXC1-213ENST00000590234 IRX3P78415 501 aaPredicted RBP17.38■□□□□ 0.37
CXXC1-213ENST00000590234 DSCC1Q9BVC3 393 aa17.38■□□□□ 0.37
CXXC1-213ENST00000590234 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.38■□□□□ 0.37
CXXC1-213ENST00000590234 MCOLN1Q9GZU1 580 aa17.38■□□□□ 0.37
CXXC1-213ENST00000590234 ASCC2Q9H1I8 757 aaPredicted RBP17.38■□□□□ 0.37
CXXC1-213ENST00000590234 IL25Q9H293 177 aa17.38■□□□□ 0.37
CXXC1-213ENST00000590234 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.38■□□□□ 0.37
CXXC1-213ENST00000590234 TSPY3P0CV98 308 aa17.37■□□□□ 0.37
CXXC1-213ENST00000590234 TSPY8P0CW00 308 aa17.37■□□□□ 0.37
CXXC1-213ENST00000590234 BCRP11274 1271 aa17.37■□□□□ 0.37
CXXC1-213ENST00000590234 EEF2P13639 858 aaKnown RBP17.37■□□□□ 0.37
CXXC1-213ENST00000590234 ATP2B2Q01814 1243 aa17.37■□□□□ 0.37
CXXC1-213ENST00000590234 KIF22Q14807 665 aa17.37■□□□□ 0.37
CXXC1-213ENST00000590234 BMP2KLQ5H9B9 411 aa17.37■□□□□ 0.37
CXXC1-213ENST00000590234 SIAH1Q8IUQ4 282 aa17.37■□□□□ 0.37
CXXC1-213ENST00000590234 TMX2Q9Y320 296 aa17.37■□□□□ 0.37
CXXC1-213ENST00000590234 PLIN4Q96Q06 1357 aa17.37■□□□□ 0.37
CXXC1-213ENST00000590234 LAMA4Q16363 1823 aa17.36■□□□□ 0.37
CXXC1-213ENST00000590234 HAND2P61296 217 aa17.36■□□□□ 0.37
CXXC1-213ENST00000590234 LACTBP83111 547 aaPredicted RBP17.36■□□□□ 0.37
CXXC1-213ENST00000590234 TRIM17Q9Y577 477 aa17.36■□□□□ 0.37
CXXC1-213ENST00000590234 IGKV6D-41A0A0C4DH26 115 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 USP17L15C9J2P7 530 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 USP17L13C9JLJ4 530 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 USP17L11C9JVI0 530 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 USP17L18D6R9N7 530 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 USP17L22D6RA61 530 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 USP17L17D6RBQ6 530 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 USP17L19D6RCP7 530 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 USP17L20D6RJB6 530 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 GCLCP48506 637 aaPredicted RBP17.35■□□□□ 0.37
CXXC1-213ENST00000590234 TFAP4Q01664 338 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 USP17L24Q0WX57 530 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 ARHGEF6Q15052 776 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 PKN2Q16513 984 aaKnown RBP17.35■□□□□ 0.37
CXXC1-213ENST00000590234 FAM47AQ5JRC9 791 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 OTOP1Q7RTM1 612 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 NEDD1Q8NHV4 660 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 LPAR1Q92633 364 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 RPAP3Q9H6T3 665 aaPredicted RBP17.35■□□□□ 0.37
CXXC1-213ENST00000590234 VCPKMTQ9H867 229 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 EFCC1Q9HA90 598 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 INCENPQ9NQS7 918 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 TOMM22Q9NS69 142 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 NYAP2Q9P242 653 aa17.35■□□□□ 0.37
CXXC1-213ENST00000590234 TSPY2A6NKD2 308 aa17.34■□□□□ 0.37
CXXC1-213ENST00000590234 ZNF213O14771 459 aa17.34■□□□□ 0.37
CXXC1-213ENST00000590234 SGSM2O43147 1006 aa17.34■□□□□ 0.37
CXXC1-213ENST00000590234 ORC4O43929 436 aa17.34■□□□□ 0.37
CXXC1-213ENST00000590234 FGRP09769 529 aa17.34■□□□□ 0.37
CXXC1-213ENST00000590234 HERVK_113P62684 666 aa17.34■□□□□ 0.37
CXXC1-213ENST00000590234 FAM110CQ1W6H9 321 aa17.34■□□□□ 0.37
CXXC1-213ENST00000590234 CATSPERGQ6ZRH7 1159 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms