RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 PICK1Q9NRD5 415 aa12.51□□□□□ -0.41
SDF2-208ENST00000589788 PI4KBQ9UBF8 816 aa12.51□□□□□ -0.41
SDF2-208ENST00000589788 SAP30BPQ9UHR5 308 aaKnown RBP12.51□□□□□ -0.41
SDF2-208ENST00000589788 MYH1P12882 1939 aa12.5□□□□□ -0.41
SDF2-208ENST00000589788 TCRBV5S4A2TA0A5A2 114 aa12.5□□□□□ -0.41
SDF2-208ENST00000589788 FAM196BA6NMK8 535 aa12.5□□□□□ -0.41
SDF2-208ENST00000589788 PHF20L1A8MW92 1017 aa12.5□□□□□ -0.41
SDF2-208ENST00000589788 CTNND1O60716 968 aaKnown RBP12.5□□□□□ -0.41
SDF2-208ENST00000589788 GLRX3O76003 335 aaKnown RBP12.5□□□□□ -0.41
SDF2-208ENST00000589788 HLA-DOAP06340 250 aa12.5□□□□□ -0.41
SDF2-208ENST00000589788 ADD2P35612 726 aa12.5□□□□□ -0.41
SDF2-208ENST00000589788 MAP3K10Q02779 954 aa12.5□□□□□ -0.41
SDF2-208ENST00000589788 PPATQ06203 517 aa12.5□□□□□ -0.41
SDF2-208ENST00000589788 PPIL2Q13356 520 aa12.5□□□□□ -0.41
SDF2-208ENST00000589788 B4GALNT3Q6L9W6 998 aa12.5□□□□□ -0.41
SDF2-208ENST00000589788 NUDT18Q6ZVK8 323 aa12.5□□□□□ -0.41
SDF2-208ENST00000589788 SCYL3Q8IZE3 742 aa12.5□□□□□ -0.41
SDF2-208ENST00000589788 OTUD7AQ8TE49 926 aaPredicted RBP12.5□□□□□ -0.41
SDF2-208ENST00000589788 RIOK1Q9BRS2 568 aaKnown RBP12.5□□□□□ -0.41
SDF2-208ENST00000589788 HERC5Q9UII4 1024 aaKnown RBP12.5□□□□□ -0.41
SDF2-208ENST00000589788 PALD1Q9ULE6 856 aa12.5□□□□□ -0.41
SDF2-208ENST00000589788 DOCK1Q14185 1865 aa12.49□□□□□ -0.41
SDF2-208ENST00000589788 CCL15-CCL14A0A0B4J2E2 113 aa12.49□□□□□ -0.41
SDF2-208ENST00000589788 IGHDP01880 384 aa12.49□□□□□ -0.41
SDF2-208ENST00000589788 SLURP2P0DP57 97 aa12.49□□□□□ -0.41
SDF2-208ENST00000589788 CETPP11597 493 aa12.49□□□□□ -0.41
SDF2-208ENST00000589788 SNAPC2Q13487 334 aa12.49□□□□□ -0.41
SDF2-208ENST00000589788 UBE3CQ15386 1083 aa12.49□□□□□ -0.41
SDF2-208ENST00000589788 CCL15Q16663 113 aa12.49□□□□□ -0.41
SDF2-208ENST00000589788 LRRFIP1Q32MZ4 808 aaKnown RBP12.49□□□□□ -0.41
SDF2-208ENST00000589788 SMC5Q8IY18 1101 aa12.49□□□□□ -0.41
SDF2-208ENST00000589788 KBTBD3Q8NAB2 608 aa12.49□□□□□ -0.41
SDF2-208ENST00000589788 CASP8AP2Q9UKL3 1982 aa12.49□□□□□ -0.41
SDF2-208ENST00000589788 MBD4O95243 580 aa12.48□□□□□ -0.41
SDF2-208ENST00000589788 TBC1D8O95759 1140 aa12.48□□□□□ -0.41
SDF2-208ENST00000589788 SLC4A8Q2Y0W8 1093 aa12.48□□□□□ -0.41
SDF2-208ENST00000589788 LHX8Q68G74 356 aa12.48□□□□□ -0.41
SDF2-208ENST00000589788 POTEEQ6S8J3 1075 aa12.48□□□□□ -0.41
SDF2-208ENST00000589788 FOXP4Q8IVH2 680 aaPredicted RBP12.48□□□□□ -0.41
SDF2-208ENST00000589788 TNS4Q8IZW8 715 aa12.48□□□□□ -0.41
SDF2-208ENST00000589788 LCORLQ8N3X6 602 aa12.48□□□□□ -0.41
SDF2-208ENST00000589788 PI4K2BQ8TCG2 481 aa12.48□□□□□ -0.41
SDF2-208ENST00000589788 TATDN2Q93075 761 aa12.48□□□□□ -0.41
SDF2-208ENST00000589788 LNPKQ9C0E8 428 aa12.48□□□□□ -0.41
SDF2-208ENST00000589788 ARMT1Q9H993 441 aa12.48□□□□□ -0.41
SDF2-208ENST00000589788 NAV1Q8NEY1 1877 aa12.48□□□□□ -0.41
SDF2-208ENST00000589788 PCNTO95613 3336 aa12.47□□□□□ -0.41
SDF2-208ENST00000589788 IGF2BP3O00425 579 aaKnown RBP eCLIP12.47□□□□□ -0.41
SDF2-208ENST00000589788 POLR3DP05423 398 aaPredicted RBP12.47□□□□□ -0.41
SDF2-208ENST00000589788 ZFYP08048 801 aaPredicted RBP12.47□□□□□ -0.41
SDF2-208ENST00000589788 PTPRAP18433 802 aa12.47□□□□□ -0.41
SDF2-208ENST00000589788 SLFNL1Q499Z3 407 aa12.47□□□□□ -0.41
SDF2-208ENST00000589788 TTC6Q86TZ1 520 aa12.47□□□□□ -0.41
SDF2-208ENST00000589788 BRI3BPQ8WY22 251 aa12.47□□□□□ -0.41
SDF2-208ENST00000589788 FSD1Q9BTV5 496 aa12.47□□□□□ -0.41
SDF2-208ENST00000589788 ZHX2Q9Y6X8 837 aa12.47□□□□□ -0.41
SDF2-208ENST00000589788 SIPA1L1O43166 1804 aa12.47□□□□□ -0.41
SDF2-208ENST00000589788 ATAD5Q96QE3 1844 aa12.46□□□□□ -0.41
SDF2-208ENST00000589788 SALL3Q9BXA9 1300 aa12.46□□□□□ -0.41
SDF2-208ENST00000589788 RNF113AO15541 343 aaKnown RBP12.46□□□□□ -0.41
SDF2-208ENST00000589788 PDE1AP54750 535 aa12.46□□□□□ -0.41
SDF2-208ENST00000589788 NUCB1Q02818 461 aa12.46□□□□□ -0.41
SDF2-208ENST00000589788 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.41
SDF2-208ENST00000589788 SDR42E1Q8WUS8 393 aa12.46□□□□□ -0.41
SDF2-208ENST00000589788 PCMTD1Q96MG8 357 aaPredicted RBP12.46□□□□□ -0.41
SDF2-208ENST00000589788 PTPN18Q99952 460 aa12.46□□□□□ -0.41
SDF2-208ENST00000589788 ZBED2Q9BTP6 218 aa12.46□□□□□ -0.41
SDF2-208ENST00000589788 MCM9Q9NXL9 1143 aa12.46□□□□□ -0.41
SDF2-208ENST00000589788 STAP2Q9UGK3 403 aa12.46□□□□□ -0.41
SDF2-208ENST00000589788 SERPINB13Q9UIV8 391 aa12.46□□□□□ -0.41
SDF2-208ENST00000589788 PNMA3Q9UL41 463 aa12.46□□□□□ -0.41
SDF2-208ENST00000589788 KCNH4Q9UQ05 1017 aa12.46□□□□□ -0.41
SDF2-208ENST00000589788 CXCL11O14625 94 aa12.45□□□□□ -0.42
SDF2-208ENST00000589788 CHGBP05060 677 aa12.45□□□□□ -0.42
SDF2-208ENST00000589788 CAP2P40123 477 aa12.45□□□□□ -0.42
SDF2-208ENST00000589788 MYSM1Q5VVJ2 828 aa12.45□□□□□ -0.42
SDF2-208ENST00000589788 METTL16Q86W50 562 aaKnown RBP12.45□□□□□ -0.42
SDF2-208ENST00000589788 AMOTL1Q8IY63 956 aa12.45□□□□□ -0.42
SDF2-208ENST00000589788 APPBP2Q92624 585 aa12.45□□□□□ -0.42
SDF2-208ENST00000589788 CFHR5Q9BXR6 569 aa12.45□□□□□ -0.42
SDF2-208ENST00000589788 PUS7LQ9H0K6 701 aaKnown RBP12.45□□□□□ -0.42
SDF2-208ENST00000589788 EHD4Q9H223 541 aa12.45□□□□□ -0.42
SDF2-208ENST00000589788 DCP1AQ9NPI6 582 aaPredicted RBP12.45□□□□□ -0.42
SDF2-208ENST00000589788 ATP8A2Q9NTI2 1148 aa12.45□□□□□ -0.42
SDF2-208ENST00000589788 SLC4A4Q9Y6R1 1079 aa12.45□□□□□ -0.42
SDF2-208ENST00000589788 TRIM75PA6NK02 468 aa12.44□□□□□ -0.42
SDF2-208ENST00000589788 GPR25O00155 361 aa12.44□□□□□ -0.42
SDF2-208ENST00000589788 ASNSP08243 561 aa12.44□□□□□ -0.42
SDF2-208ENST00000589788 DNAJB2P25686 324 aa12.44□□□□□ -0.42
SDF2-208ENST00000589788 CRHR2Q13324 411 aa12.44□□□□□ -0.42
SDF2-208ENST00000589788 SKIV2LQ15477 1246 aaKnown RBP12.44□□□□□ -0.42
SDF2-208ENST00000589788 TAF1CQ15572 869 aaPredicted RBP12.44□□□□□ -0.42
SDF2-208ENST00000589788 NOM1Q5C9Z4 860 aaKnown RBP12.44□□□□□ -0.42
SDF2-208ENST00000589788 FAM43AQ8N2R8 423 aa12.44□□□□□ -0.42
SDF2-208ENST00000589788 TBC1D2Q9BYX2 928 aa12.44□□□□□ -0.42
SDF2-208ENST00000589788 TMEM134Q9H6X4 195 aa12.44□□□□□ -0.42
SDF2-208ENST00000589788 DNAJC18Q9H819 358 aa12.44□□□□□ -0.42
SDF2-208ENST00000589788 ZCCHC17Q9NP64 241 aaKnown RBP12.44□□□□□ -0.42
SDF2-208ENST00000589788 DDX60LQ5H9U9 1706 aaKnown RBP12.44□□□□□ -0.42
SDF2-208ENST00000589788 PHIPQ8WWQ0 1821 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms