RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 KIF5CO60282 957 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 RASGRP1O95267 797 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 PECAM1P16284 738 aaPredicted RBP6.47□□□□□ -1.37
LINC01538-201ENST00000588074 TRPC1P48995 793 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 CORO7P57737 925 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 GJC2Q5T442 439 aaPredicted RBP6.47□□□□□ -1.37
LINC01538-201ENST00000588074 C6orf15Q6UXA7 325 aaPredicted RBP6.47□□□□□ -1.37
LINC01538-201ENST00000588074 ERC1Q8IUD2 1116 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 IQCF2Q8IXL9 164 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 AFAP1L2Q8N4X5 818 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 C1orf127Q8N9H9 656 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 CNKSR1Q969H4 720 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 TEKT1Q969V4 418 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 CCDC34Q96HJ3 373 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 FAM107BQ9H098 131 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 SUV39H2Q9H5I1 410 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 CAAP1Q9H8G2 361 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 HRH3Q9Y5N1 445 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 RPS6KA5O75582 802 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 VDRP11473 427 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 LIG3P49916 1009 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 VPS72Q15906 364 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 TPTE2Q6XPS3 522 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 BNC2Q6ZN30 1099 aaPredicted RBP6.47□□□□□ -1.37
LINC01538-201ENST00000588074 GBP6Q6ZN66 633 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 RUFY4Q6ZNE9 571 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 CHPFQ8IZ52 775 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 NBPF15Q8N660 670 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 ZNF280CQ8ND82 737 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 NEK11Q8NG66 645 aa6.47□□□□□ -1.37
LINC01538-201ENST00000588074 MIA2Q96PC5 1412 aa6.46□□□□□ -1.37
LINC01538-201ENST00000588074 MAP3K1Q13233 1512 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 EIF3CLB5ME19 914 aaKnown RBP6.46□□□□□ -1.38
LINC01538-201ENST00000588074 ALG1L2C9J202 215 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 CD53P19397 219 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 TFE3P19532 575 aaPredicted RBP6.46□□□□□ -1.38
LINC01538-201ENST00000588074 NEK2P51955 445 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 SFSWAPQ12872 951 aaKnown RBP6.46□□□□□ -1.38
LINC01538-201ENST00000588074 ACBD5Q5T8D3 534 aaPredicted RBP6.46□□□□□ -1.38
LINC01538-201ENST00000588074 CAVIN1Q6NZI2 390 aaKnown RBP6.46□□□□□ -1.38
LINC01538-201ENST00000588074 ANKRD18AQ8IVF6 992 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 GALNT12Q8IXK2 581 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 MRPL50Q8N5N7 158 aaKnown RBP6.46□□□□□ -1.38
LINC01538-201ENST00000588074 ANKRD24Q8TF21 1146 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 TCP11Q8WWU5 503 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 EIF3CQ99613 913 aaKnown RBP6.46□□□□□ -1.38
LINC01538-201ENST00000588074 SENP7Q9BQF6 1050 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 TRIM7Q9C029 511 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 RWDD1Q9H446 243 aaPredicted RBP6.46□□□□□ -1.38
LINC01538-201ENST00000588074 ABCC8Q09428 1581 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 PDS5BQ9NTI5 1447 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 ZSCAN9O15535 394 aaPredicted RBP6.46□□□□□ -1.38
LINC01538-201ENST00000588074 DDAH1O94760 285 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 VCAM1P19320 739 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 PMLP29590 882 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 RBM6P78332 1123 aaKnown RBP6.46□□□□□ -1.38
LINC01538-201ENST00000588074 PABPC4Q13310 644 aaKnown RBP eCLIP6.46□□□□□ -1.38
LINC01538-201ENST00000588074 ARID5BQ14865 1188 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 PPP2R5EQ16537 467 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 ZSCAN23Q3MJ62 389 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 C16orf87Q6PH81 154 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 FAM196AQ6ZSG2 479 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 SVIPQ8NHG7 77 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 XAGE2Q96GT9 111 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 ELP3Q9H9T3 547 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 TMOD4Q9NZQ9 345 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 MCM8Q9UJA3 840 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 PTPRCP08575 1304 aa6.46□□□□□ -1.38
LINC01538-201ENST00000588074 LAMC3Q9Y6N6 1575 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 A0A087WUV0 522 aaPredicted RBP6.45□□□□□ -1.38
LINC01538-201ENST00000588074 GSG1L2A8MUP6 293 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 H7C1W4 665 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 ATP8B1O43520 1251 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 F13A1P00488 732 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 MNAT1P51948 309 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 MRPL12P52815 198 aaKnown RBP6.45□□□□□ -1.38
LINC01538-201ENST00000588074 LRSAM1Q6UWE0 723 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 CYP2U1Q7Z449 544 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 LSRQ86X29 649 aaPredicted RBP6.45□□□□□ -1.38
LINC01538-201ENST00000588074 HSCBQ8IWL3 235 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 TRIM42Q8IWZ5 723 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 BICD1Q96G01 975 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 HSH2DQ96JZ2 352 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 TRIM8Q9BZR9 551 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 NRBP1Q9UHY1 535 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 FCF1Q9Y324 198 aaKnown RBP6.45□□□□□ -1.38
LINC01538-201ENST00000588074 KCNMB2Q9Y691 235 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 ADH1BP00325 375 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 GRNP28799 593 aaKnown RBP6.45□□□□□ -1.38
LINC01538-201ENST00000588074 ACTN2P35609 894 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 ESCO1Q5FWF5 840 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 AKAP4Q5JQC9 854 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 PERM1Q5SV97 790 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 PEAR1Q5VY43 1037 aaPredicted RBP6.45□□□□□ -1.38
LINC01538-201ENST00000588074 XKR5Q6UX68 686 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 EXOC4Q96A65 974 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 TIFAQ96CG3 184 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 FERD3LQ96RJ6 166 aa6.45□□□□□ -1.38
LINC01538-201ENST00000588074 TARS2Q9BW92 718 aaKnown RBP6.45□□□□□ -1.38
LINC01538-201ENST00000588074 CDH19Q9H159 772 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms