RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 PPM1JQ5JR12 505 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 METTL16Q86W50 562 aaKnown RBP7.42□□□□□ -1.22
SMAD4-203ENST00000585448 C12orf40Q86WS4 652 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 ZDHHC13Q8IUH4 622 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 PDCL2Q8N4E4 241 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 GPATCH11Q8N954 259 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 MNS1Q8NEH6 495 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 MYRIPQ8NFW9 859 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 GIMAP7Q8NHV1 300 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 SIN3AQ96ST3 1273 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 METTL22Q9BUU2 404 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-203ENST00000585448 COPRSQ9NQ92 184 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 SMC4Q9NTJ3 1288 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 NOL7Q9UMY1 257 aaKnown RBP7.42□□□□□ -1.22
SMAD4-203ENST00000585448 IBTKQ9P2D0 1353 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-203ENST00000585448 WDR97A6NE52 1622 aa7.41□□□□□ -1.22
SMAD4-203ENST00000585448 F13A1P00488 732 aa7.41□□□□□ -1.22
SMAD4-203ENST00000585448 CCDC172P0C7W6 258 aa7.41□□□□□ -1.22
SMAD4-203ENST00000585448 ANAPC15P60006 121 aa7.41□□□□□ -1.22
SMAD4-203ENST00000585448 CYP27A1Q02318 531 aa7.41□□□□□ -1.22
SMAD4-203ENST00000585448 OS9Q13438 667 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-203ENST00000585448 FBXL19Q6PCT2 694 aa7.41□□□□□ -1.22
SMAD4-203ENST00000585448 BNC2Q6ZN30 1099 aaPredicted RBP7.41□□□□□ -1.22
SMAD4-203ENST00000585448 ZNF507Q8TCN5 953 aa7.41□□□□□ -1.22
SMAD4-203ENST00000585448 ADAM30Q9UKF2 790 aa7.41□□□□□ -1.22
SMAD4-203ENST00000585448 DAGLAQ9Y4D2 1042 aa7.41□□□□□ -1.22
SMAD4-203ENST00000585448 CCDC144AA2RUR9 1427 aa7.41□□□□□ -1.22
SMAD4-203ENST00000585448 BPNT1O95861 308 aa7.4□□□□□ -1.22
SMAD4-203ENST00000585448 TNNT3P45378 269 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-203ENST00000585448 MAP2K1Q02750 393 aaPredicted RBP7.4□□□□□ -1.22
SMAD4-203ENST00000585448 PDE4BQ07343 736 aa7.4□□□□□ -1.22
SMAD4-203ENST00000585448 SNAP47Q5SQN1 464 aa7.4□□□□□ -1.22
SMAD4-203ENST00000585448 CERS3Q8IU89 383 aa7.4□□□□□ -1.22
SMAD4-203ENST00000585448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.4□□□□□ -1.22
SMAD4-203ENST00000585448 GOLM1Q8NBJ4 401 aa7.4□□□□□ -1.22
SMAD4-203ENST00000585448 NT5C1AQ9BXI3 368 aa7.4□□□□□ -1.22
SMAD4-203ENST00000585448 OGFRQ9NZT2 677 aa7.4□□□□□ -1.22
SMAD4-203ENST00000585448 DDX41Q9UJV9 622 aaKnown RBP7.4□□□□□ -1.22
SMAD4-203ENST00000585448 AKNAQ7Z591 1439 aa7.4□□□□□ -1.22
SMAD4-203ENST00000585448 ABCC9O60706 1549 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 VPS8Q8N3P4 1428 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 KTN1Q86UP2 1357 aaKnown RBP7.39□□□□□ -1.23
SMAD4-203ENST00000585448 RAD50Q92878 1312 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 GOLIM4O00461 696 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 DYNC1LI2O43237 492 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-203ENST00000585448 F13BP05160 661 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 CDK8P49336 464 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 GTF2A1P52655 376 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-203ENST00000585448 ZKSCAN8Q15776 578 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-203ENST00000585448 TMEM201Q5SNT2 666 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 OGFOD3Q6PK18 319 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 CASC1Q6TDU7 716 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 REC114Q7Z4M0 266 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 USP48Q86UV5 1035 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMAD4-203ENST00000585448 SHKBP1Q8TBC3 707 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 ZNF296Q8WUU4 475 aaPredicted RBP7.39□□□□□ -1.23
SMAD4-203ENST00000585448 MFSD14AQ96MC6 490 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 TBC1D32Q96NH3 1257 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 SLC26A8Q96RN1 970 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 UPF2Q9HAU5 1272 aaKnown RBP7.39□□□□□ -1.23
SMAD4-203ENST00000585448 TERF2IPQ9NYB0 399 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 ADAMTS1Q9UHI8 967 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 SH3BP1Q9Y3L3 701 aa7.39□□□□□ -1.23
SMAD4-203ENST00000585448 PRR19A6NJB7 356 aa7.38□□□□□ -1.23
SMAD4-203ENST00000585448 MINDY4BA8MYZ0 360 aa7.38□□□□□ -1.23
SMAD4-203ENST00000585448 RNGTTO60942 597 aaKnown RBP7.38□□□□□ -1.23
SMAD4-203ENST00000585448 LRIG2O94898 1065 aa7.38□□□□□ -1.23
SMAD4-203ENST00000585448 ADMP35318 185 aa7.38□□□□□ -1.23
SMAD4-203ENST00000585448 RRP1P56182 461 aaKnown RBP7.38□□□□□ -1.23
SMAD4-203ENST00000585448 NBPF6Q5VWK0 638 aa7.38□□□□□ -1.23
SMAD4-203ENST00000585448 NBPF5PQ86XG9 351 aaPredicted RBP7.38□□□□□ -1.23
SMAD4-203ENST00000585448 HID1Q8IV36 788 aa7.38□□□□□ -1.23
SMAD4-203ENST00000585448 MRPL41Q8IXM3 137 aaKnown RBP7.38□□□□□ -1.23
SMAD4-203ENST00000585448 NBPF4Q96M43 638 aa7.38□□□□□ -1.23
SMAD4-203ENST00000585448 ANTXR1Q9H6X2 564 aa7.38□□□□□ -1.23
SMAD4-203ENST00000585448 CSADQ9Y600 493 aa7.38□□□□□ -1.23
SMAD4-203ENST00000585448 MAPKBP1O60336 1514 aa7.37□□□□□ -1.23
SMAD4-203ENST00000585448 GOLGA3Q08378 1498 aa7.37□□□□□ -1.23
SMAD4-203ENST00000585448 RRBP1Q9P2E9 1410 aaKnown RBP7.37□□□□□ -1.23
SMAD4-203ENST00000585448 KIF16BQ96L93 1317 aa7.37□□□□□ -1.23
SMAD4-203ENST00000585448 LOC102724159A0A0B4J2E5 919 aa7.37□□□□□ -1.23
SMAD4-203ENST00000585448 PRAMEF27A3QJZ7 478 aa7.37□□□□□ -1.23
SMAD4-203ENST00000585448 F6X3S4 739 aa7.37□□□□□ -1.23
SMAD4-203ENST00000585448 HSP90AB1P08238 724 aaKnown RBP7.37□□□□□ -1.23
SMAD4-203ENST00000585448 HDLBPQ00341 1268 aaKnown RBP7.37□□□□□ -1.23
SMAD4-203ENST00000585448 FAM160A1Q05DH4 1040 aa7.37□□□□□ -1.23
SMAD4-203ENST00000585448 SLBPQ14493 270 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMAD4-203ENST00000585448 PWP2Q15269 919 aaKnown RBP7.37□□□□□ -1.23
SMAD4-203ENST00000585448 CDC37L1Q7L3B6 337 aa7.37□□□□□ -1.23
SMAD4-203ENST00000585448 MFSD2AQ8NA29 543 aa7.37□□□□□ -1.23
SMAD4-203ENST00000585448 JARID2Q92833 1246 aaPredicted RBP7.37□□□□□ -1.23
SMAD4-203ENST00000585448 PICK1Q9NRD5 415 aa7.37□□□□□ -1.23
SMAD4-203ENST00000585448 FHAD1B1AJZ9 1412 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 CLIP1P30622 1438 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 GRK4P32298 578 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 ETF1P62495 437 aaKnown RBP7.36□□□□□ -1.23
SMAD4-203ENST00000585448 ATP2B3Q16720 1220 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 CWF19L2Q2TBE0 894 aaKnown RBP7.36□□□□□ -1.23
SMAD4-203ENST00000585448 CYP27C1Q4G0S4 372 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms