RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 USP17L21D6R901 530 aa15.8■□□□□ 0.12
ERBB2-220ENST00000584684 GNAT2P19087 354 aa15.8■□□□□ 0.12
ERBB2-220ENST00000584684 PRKCZQ05513 592 aa15.8■□□□□ 0.12
ERBB2-220ENST00000584684 RAB3GAP1Q15042 981 aa15.8■□□□□ 0.12
ERBB2-220ENST00000584684 ANKRD45Q5TZF3 282 aa15.8■□□□□ 0.12
ERBB2-220ENST00000584684 SMC5Q8IY18 1101 aa15.8■□□□□ 0.12
ERBB2-220ENST00000584684 SLC44A5Q8NCS7 719 aa15.8■□□□□ 0.12
ERBB2-220ENST00000584684 CCDC17Q96LX7 622 aa15.8■□□□□ 0.12
ERBB2-220ENST00000584684 MKI67P46013 3256 aaKnown RBP15.8■□□□□ 0.12
ERBB2-220ENST00000584684 TNPO2O14787 897 aaKnown RBP15.79■□□□□ 0.12
ERBB2-220ENST00000584684 GPAA1O43292 621 aa15.79■□□□□ 0.12
ERBB2-220ENST00000584684 HERVK_113P62684 666 aa15.79■□□□□ 0.12
ERBB2-220ENST00000584684 IRF5Q13568 498 aa15.79■□□□□ 0.12
ERBB2-220ENST00000584684 SEPT2Q15019 361 aa15.79■□□□□ 0.12
ERBB2-220ENST00000584684 SBK1Q52WX2 424 aa15.79■□□□□ 0.12
ERBB2-220ENST00000584684 CTR9Q6PD62 1173 aa15.79■□□□□ 0.12
ERBB2-220ENST00000584684 TICAM2Q86XR7 235 aa15.79■□□□□ 0.12
ERBB2-220ENST00000584684 RAET1EQ8TD07 263 aa15.79■□□□□ 0.12
ERBB2-220ENST00000584684 DYNLL2Q96FJ2 89 aa15.79■□□□□ 0.12
ERBB2-220ENST00000584684 A0A0G2JMZ2 1700 aa15.79■□□□□ 0.12
ERBB2-220ENST00000584684 GSG1L2A8MUP6 293 aa15.78■□□□□ 0.12
ERBB2-220ENST00000584684 VCAM1P19320 739 aa15.78■□□□□ 0.12
ERBB2-220ENST00000584684 GRK4P32298 578 aa15.78■□□□□ 0.12
ERBB2-220ENST00000584684 CDK8P49336 464 aa15.78■□□□□ 0.12
ERBB2-220ENST00000584684 SLAIN1Q8ND83 568 aa15.78■□□□□ 0.12
ERBB2-220ENST00000584684 ACER1Q8TDN7 264 aa15.78■□□□□ 0.12
ERBB2-220ENST00000584684 SH3TC2Q8TF17 1288 aa15.78■□□□□ 0.12
ERBB2-220ENST00000584684 FSD1Q9BTV5 496 aa15.78■□□□□ 0.12
ERBB2-220ENST00000584684 RWDD1Q9H446 243 aaPredicted RBP15.78■□□□□ 0.12
ERBB2-220ENST00000584684 DOCK3Q8IZD9 2030 aa15.78■□□□□ 0.12
ERBB2-220ENST00000584684 PLXNB2O15031 1838 aa15.78■□□□□ 0.12
ERBB2-220ENST00000584684 CYP2D7A0A087X1C5 515 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 POTEFA5A3E0 1075 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 USP17L15C9J2P7 530 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 USP17L13C9JLJ4 530 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 USP17L11C9JVI0 530 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 USP17L18D6R9N7 530 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 USP17L22D6RA61 530 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 USP17L17D6RBQ6 530 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 USP17L19D6RCP7 530 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 USP17L20D6RJB6 530 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 M0R2C6 588 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 PDE1AP54750 535 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 USP17L24Q0WX57 530 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 ZMYM1Q5SVZ6 1142 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 LBX2Q6XYB7 198 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 PXYLP1Q8TE99 480 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 COA7Q96BR5 231 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 P2RX7Q99572 595 aaKnown RBP15.77■□□□□ 0.12
ERBB2-220ENST00000584684 TMEM106CQ9BVX2 250 aa15.77■□□□□ 0.12
ERBB2-220ENST00000584684 EPB41L4AQ9HCS5 686 aaPredicted RBP15.77■□□□□ 0.12
ERBB2-220ENST00000584684 RLFQ13129 1914 aa15.76■□□□□ 0.11
ERBB2-220ENST00000584684 PARP14Q460N5 1801 aa15.76■□□□□ 0.11
ERBB2-220ENST00000584684 MPHOSPH10O00566 681 aaKnown RBP15.76■□□□□ 0.11
ERBB2-220ENST00000584684 FLT3LGP49771 235 aa15.76■□□□□ 0.11
ERBB2-220ENST00000584684 EXOC6Q8TAG9 804 aa15.76■□□□□ 0.11
ERBB2-220ENST00000584684 LPAR1Q92633 364 aa15.76■□□□□ 0.11
ERBB2-220ENST00000584684 SH2D4AQ9H788 454 aa15.76■□□□□ 0.11
ERBB2-220ENST00000584684 GABRQQ9UN88 632 aa15.76■□□□□ 0.11
ERBB2-220ENST00000584684 A0A1W2PRG0 241 aa15.75■□□□□ 0.11
ERBB2-220ENST00000584684 SMIM22K7EJ46 135 aa15.75■□□□□ 0.11
ERBB2-220ENST00000584684 ECM2O94769 699 aaPredicted RBP15.75■□□□□ 0.11
ERBB2-220ENST00000584684 AKR1B1P15121 316 aa15.75■□□□□ 0.11
ERBB2-220ENST00000584684 ICA1Q05084 483 aa15.75■□□□□ 0.11
ERBB2-220ENST00000584684 ZYXQ15942 572 aaKnown RBP15.75■□□□□ 0.11
ERBB2-220ENST00000584684 CATSPERGQ6ZRH7 1159 aa15.75■□□□□ 0.11
ERBB2-220ENST00000584684 GPRC5AQ8NFJ5 357 aa15.75■□□□□ 0.11
ERBB2-220ENST00000584684 EVI5LQ96CN4 794 aa15.75■□□□□ 0.11
ERBB2-220ENST00000584684 TXNRD2Q9NNW7 524 aa15.75■□□□□ 0.11
ERBB2-220ENST00000584684 RBPJLQ9UBG7 517 aa15.75■□□□□ 0.11
ERBB2-220ENST00000584684 TMX2Q9Y320 296 aa15.75■□□□□ 0.11
ERBB2-220ENST00000584684 RABGAP1Q9Y3P9 1069 aa15.75■□□□□ 0.11
ERBB2-220ENST00000584684 ADCY3O60266 1144 aa15.74■□□□□ 0.11
ERBB2-220ENST00000584684 MAPK4P31152 587 aa15.74■□□□□ 0.11
ERBB2-220ENST00000584684 ERVK-9P63128 1117 aa15.74■□□□□ 0.11
ERBB2-220ENST00000584684 ERVK-24P63145 666 aa15.74■□□□□ 0.11
ERBB2-220ENST00000584684 POTEEQ6S8J3 1075 aa15.74■□□□□ 0.11
ERBB2-220ENST00000584684 SIAH1Q8IUQ4 282 aa15.74■□□□□ 0.11
ERBB2-220ENST00000584684 KANSL2Q9H9L4 492 aa15.74■□□□□ 0.11
ERBB2-220ENST00000584684 ARHGEF10LQ9HCE6 1279 aa15.74■□□□□ 0.11
ERBB2-220ENST00000584684 ZNF236Q9UL36 1845 aa15.73■□□□□ 0.11
ERBB2-220ENST00000584684 PATL2C9JE40 543 aaKnown RBP15.73■□□□□ 0.11
ERBB2-220ENST00000584684 RASA1P20936 1047 aa15.73■□□□□ 0.11
ERBB2-220ENST00000584684 TDO2P48775 406 aa15.73■□□□□ 0.11
ERBB2-220ENST00000584684 UBXN2AP68543 259 aa15.73■□□□□ 0.11
ERBB2-220ENST00000584684 NUCB1Q02818 461 aa15.73■□□□□ 0.11
ERBB2-220ENST00000584684 CHD1LQ86WJ1 897 aa15.73■□□□□ 0.11
ERBB2-220ENST00000584684 SOCS4Q8WXH5 440 aa15.73■□□□□ 0.11
ERBB2-220ENST00000584684 NACAP1Q9BZK3 213 aa15.73■□□□□ 0.11
ERBB2-220ENST00000584684 LNPKQ9C0E8 428 aa15.73■□□□□ 0.11
ERBB2-220ENST00000584684 RPAP3Q9H6T3 665 aaPredicted RBP15.73■□□□□ 0.11
ERBB2-220ENST00000584684 ZNF287Q9HBT7 754 aa15.73■□□□□ 0.11
ERBB2-220ENST00000584684 GJD2Q9UKL4 321 aa15.73■□□□□ 0.11
ERBB2-220ENST00000584684 SUPT16HQ9Y5B9 1047 aaKnown RBP15.73■□□□□ 0.11
ERBB2-220ENST00000584684 PLIN4Q96Q06 1357 aa15.73■□□□□ 0.11
ERBB2-220ENST00000584684 SPDYE16A6NNV3 312 aaPredicted RBP15.72■□□□□ 0.11
ERBB2-220ENST00000584684 IGHDP01880 384 aa15.72■□□□□ 0.11
ERBB2-220ENST00000584684 CLEC10AQ8IUN9 316 aa15.72■□□□□ 0.11
ERBB2-220ENST00000584684 IFNL3Q8IZI9 196 aa15.72■□□□□ 0.11
ERBB2-220ENST00000584684 SEC62Q99442 399 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms