RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 PALD1Q9ULE6 856 aa17.44■□□□□ 0.38
CSNK1D-224ENST00000584672 RABGAP1Q9Y3P9 1069 aa17.44■□□□□ 0.38
CSNK1D-224ENST00000584672 IVNS1ABPQ9Y6Y0 642 aa17.44■□□□□ 0.38
CSNK1D-224ENST00000584672 FOCADQ5VW36 1801 aa17.43■□□□□ 0.38
CSNK1D-224ENST00000584672 CCNA1P78396 465 aa17.43■□□□□ 0.38
CSNK1D-224ENST00000584672 PPM1EQ8WY54 764 aa17.43■□□□□ 0.38
CSNK1D-224ENST00000584672 RNPC3Q96LT9 517 aaKnown RBP17.43■□□□□ 0.38
CSNK1D-224ENST00000584672 DHX36Q9H2U1 1008 aaKnown RBP17.43■□□□□ 0.38
CSNK1D-224ENST00000584672 BTBD7Q9P203 1132 aa17.43■□□□□ 0.38
CSNK1D-224ENST00000584672 FLT1P17948 1338 aa17.43■□□□□ 0.38
CSNK1D-224ENST00000584672 GH2P01242 217 aa17.42■□□□□ 0.38
CSNK1D-224ENST00000584672 CYBAP13498 195 aa17.42■□□□□ 0.38
CSNK1D-224ENST00000584672 ADCYAP1R1P41586 468 aa17.42■□□□□ 0.38
CSNK1D-224ENST00000584672 EPHB4P54760 987 aa17.42■□□□□ 0.38
CSNK1D-224ENST00000584672 GRIN2CQ14957 1233 aa17.42■□□□□ 0.38
CSNK1D-224ENST00000584672 FAM9BQ8IZU0 186 aa17.42■□□□□ 0.38
CSNK1D-224ENST00000584672 ARRDC4Q8NCT1 418 aa17.42■□□□□ 0.38
CSNK1D-224ENST00000584672 AKAP2Q9Y2D5 859 aa17.42■□□□□ 0.38
CSNK1D-224ENST00000584672 MYO5AQ9Y4I1 1855 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 TMEM265A0A087WTH1 108 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 USP17L15C9J2P7 530 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 USP17L13C9JLJ4 530 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 USP17L11C9JVI0 530 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 USP17L18D6R9N7 530 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 USP17L22D6RA61 530 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 USP17L17D6RBQ6 530 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 USP17L19D6RCP7 530 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 USP17L20D6RJB6 530 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 ITGB8P26012 769 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 MCAMP43121 646 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 USP17L24Q0WX57 530 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 GRB14Q14449 540 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 SNRKQ9NRH2 765 aa17.41■□□□□ 0.38
CSNK1D-224ENST00000584672 MUC3AQ02505 3323 aa17.4■□□□□ 0.38
CSNK1D-224ENST00000584672 PRAMEF19Q5SWL8 479 aa17.4■□□□□ 0.38
CSNK1D-224ENST00000584672 NAA16Q6N069 864 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-224ENST00000584672 ADGRA1Q86SQ6 560 aa17.4■□□□□ 0.38
CSNK1D-224ENST00000584672 FOXP4Q8IVH2 680 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-224ENST00000584672 MEIS3Q99687 375 aa17.4■□□□□ 0.38
CSNK1D-224ENST00000584672 SMC4Q9NTJ3 1288 aa17.4■□□□□ 0.38
CSNK1D-224ENST00000584672 MYH1P12882 1939 aa17.39■□□□□ 0.37
CSNK1D-224ENST00000584672 BAG3O95817 575 aa17.39■□□□□ 0.37
CSNK1D-224ENST00000584672 HOXC6P09630 235 aa17.39■□□□□ 0.37
CSNK1D-224ENST00000584672 VCAM1P19320 739 aa17.39■□□□□ 0.37
CSNK1D-224ENST00000584672 TLE2Q04725 743 aa17.39■□□□□ 0.37
CSNK1D-224ENST00000584672 RAB3GAP1Q15042 981 aa17.39■□□□□ 0.37
CSNK1D-224ENST00000584672 DPP9Q86TI2 863 aa17.39■□□□□ 0.37
CSNK1D-224ENST00000584672 SPDYE16A6NNV3 312 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-224ENST00000584672 SRGAP3O43295 1099 aa17.38■□□□□ 0.37
CSNK1D-224ENST00000584672 HLA-DOAP06340 250 aa17.38■□□□□ 0.37
CSNK1D-224ENST00000584672 DNAJB2P25686 324 aa17.38■□□□□ 0.37
CSNK1D-224ENST00000584672 ADORA2AP29274 412 aa17.38■□□□□ 0.37
CSNK1D-224ENST00000584672 ARID4AP29374 1257 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-224ENST00000584672 DYNLL1P63167 89 aaKnown RBP17.38■□□□□ 0.37
CSNK1D-224ENST00000584672 SNX17Q15036 470 aa17.38■□□□□ 0.37
CSNK1D-224ENST00000584672 CATSPERGQ6ZRH7 1159 aa17.38■□□□□ 0.37
CSNK1D-224ENST00000584672 METTL16Q86W50 562 aaKnown RBP17.38■□□□□ 0.37
CSNK1D-224ENST00000584672 ACER1Q8TDN7 264 aa17.38■□□□□ 0.37
CSNK1D-224ENST00000584672 C12orf42Q96LP6 360 aa17.38■□□□□ 0.37
CSNK1D-224ENST00000584672 GINM1Q9NU53 330 aa17.38■□□□□ 0.37
CSNK1D-224ENST00000584672 LRRC41Q15345 812 aa17.37■□□□□ 0.37
CSNK1D-224ENST00000584672 FAM47AQ5JRC9 791 aa17.37■□□□□ 0.37
CSNK1D-224ENST00000584672 RPAP3Q9H6T3 665 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-224ENST00000584672 ZNF521Q96K83 1311 aa17.37■□□□□ 0.37
CSNK1D-224ENST00000584672 ZNF236Q9UL36 1845 aa17.36■□□□□ 0.37
CSNK1D-224ENST00000584672 SEPT4O43236 478 aa17.36■□□□□ 0.37
CSNK1D-224ENST00000584672 RAG1P15918 1043 aa17.36■□□□□ 0.37
CSNK1D-224ENST00000584672 PLCG2P16885 1265 aa17.36■□□□□ 0.37
CSNK1D-224ENST00000584672 MOV10L1Q9BXT6 1211 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-224ENST00000584672 PQBP1O60828 265 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-224ENST00000584672 COBLO75128 1261 aa17.35■□□□□ 0.37
CSNK1D-224ENST00000584672 IGHA2P01877 340 aa17.35■□□□□ 0.37
CSNK1D-224ENST00000584672 CLTBP09497 229 aa17.35■□□□□ 0.37
CSNK1D-224ENST00000584672 ZNF576Q9H609 170 aa17.35■□□□□ 0.37
CSNK1D-224ENST00000584672 SMCHD1A6NHR9 2005 aa17.34■□□□□ 0.37
CSNK1D-224ENST00000584672 PLA2G5P39877 138 aa17.34■□□□□ 0.37
CSNK1D-224ENST00000584672 USP14P54578 494 aa17.34■□□□□ 0.37
CSNK1D-224ENST00000584672 PPP4CP60510 307 aa17.34■□□□□ 0.37
CSNK1D-224ENST00000584672 FPGSQ05932 587 aa17.34■□□□□ 0.37
CSNK1D-224ENST00000584672 OLFML2BQ68BL8 750 aa17.34■□□□□ 0.37
CSNK1D-224ENST00000584672 KIAA1683Q9H0B3 1180 aa17.34■□□□□ 0.37
CSNK1D-224ENST00000584672 NOB1Q9ULX3 412 aaKnown RBP17.34■□□□□ 0.37
CSNK1D-224ENST00000584672 TACC3Q9Y6A5 838 aa17.34■□□□□ 0.37
CSNK1D-224ENST00000584672 PLXNA1Q9UIW2 1896 aa17.33■□□□□ 0.37
CSNK1D-224ENST00000584672 UQCRFS1P1P0C7P4 283 aa17.33■□□□□ 0.36
CSNK1D-224ENST00000584672 ERCC3P19447 782 aa17.33■□□□□ 0.36
CSNK1D-224ENST00000584672 CCDC85BQ15834 202 aaPredicted RBP17.33■□□□□ 0.36
CSNK1D-224ENST00000584672 TTC39AQ5SRH9 613 aa17.33■□□□□ 0.36
CSNK1D-224ENST00000584672 ATF7IPQ6VMQ6 1270 aa17.33■□□□□ 0.36
CSNK1D-224ENST00000584672 LBX2Q6XYB7 198 aa17.33■□□□□ 0.36
CSNK1D-224ENST00000584672 MIGA1Q8NAN2 632 aa17.33■□□□□ 0.36
CSNK1D-224ENST00000584672 ADAMTS19Q8TE59 1207 aa17.33■□□□□ 0.36
CSNK1D-224ENST00000584672 TIFAQ96CG3 184 aa17.33■□□□□ 0.36
CSNK1D-224ENST00000584672 FAM122AQ96E09 287 aa17.33■□□□□ 0.36
CSNK1D-224ENST00000584672 PRDM12Q9H4Q4 367 aa17.33■□□□□ 0.36
CSNK1D-224ENST00000584672 MYO9BQ13459 2157 aa17.32■□□□□ 0.36
CSNK1D-224ENST00000584672 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-224ENST00000584672 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-224ENST00000584672 GRXCR1A8MXD5 290 aa17.32■□□□□ 0.36
CSNK1D-224ENST00000584672 PLS1Q14651 629 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms