RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 UBLCP1Q8WVY7 318 aaPredicted RBP13.47□□□□□ -0.25
ERBB2-206ENST00000578373 LRRC27Q9C0I9 530 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 PCDHB6Q9Y5E3 794 aa13.47□□□□□ -0.25
ERBB2-206ENST00000578373 CETN2P41208 172 aa13.46□□□□□ -0.25
ERBB2-206ENST00000578373 TECP42680 631 aa13.46□□□□□ -0.25
ERBB2-206ENST00000578373 MRPS25P82663 173 aaKnown RBP13.46□□□□□ -0.25
ERBB2-206ENST00000578373 NCBP1Q09161 790 aaKnown RBP13.46□□□□□ -0.25
ERBB2-206ENST00000578373 ZYXQ15942 572 aaKnown RBP13.46□□□□□ -0.25
ERBB2-206ENST00000578373 ZSCAN26Q16670 478 aa13.46□□□□□ -0.25
ERBB2-206ENST00000578373 KIF1BO60333 1816 aa13.46□□□□□ -0.25
ERBB2-206ENST00000578373 NDUFAB1O14561 156 aa13.46□□□□□ -0.25
ERBB2-206ENST00000578373 GBP2P32456 591 aaPredicted RBP13.46□□□□□ -0.25
ERBB2-206ENST00000578373 TCP10Q12799 353 aa13.46□□□□□ -0.25
ERBB2-206ENST00000578373 OR8K1Q8NGG5 319 aa13.46□□□□□ -0.25
ERBB2-206ENST00000578373 AFAP1L1Q8TED9 768 aa13.46□□□□□ -0.25
ERBB2-206ENST00000578373 SECISBP2LQ93073 1101 aaKnown RBP13.46□□□□□ -0.25
ERBB2-206ENST00000578373 SELENOOQ9BVL4 669 aa13.46□□□□□ -0.25
ERBB2-206ENST00000578373 RASSF4Q9H2L5 321 aa13.46□□□□□ -0.25
ERBB2-206ENST00000578373 GTF2A1P52655 376 aaPredicted RBP13.46□□□□□ -0.26
ERBB2-206ENST00000578373 TTC19Q6DKK2 380 aaPredicted RBP13.46□□□□□ -0.26
ERBB2-206ENST00000578373 CABP7Q86V35 215 aa13.46□□□□□ -0.26
ERBB2-206ENST00000578373 SLC35F6Q8N357 371 aa13.46□□□□□ -0.26
ERBB2-206ENST00000578373 PDE11AQ9HCR9 933 aa13.46□□□□□ -0.26
ERBB2-206ENST00000578373 CCDC87Q9NVE4 849 aa13.46□□□□□ -0.26
ERBB2-206ENST00000578373 POLR3EQ9NVU0 708 aa13.46□□□□□ -0.26
ERBB2-206ENST00000578373 ERBB3P21860 1342 aa13.46□□□□□ -0.26
ERBB2-206ENST00000578373 CLASP1Q7Z460 1538 aa13.46□□□□□ -0.26
ERBB2-206ENST00000578373 LRRC7Q96NW7 1537 aa13.46□□□□□ -0.26
ERBB2-206ENST00000578373 SOWAHDA6NJG2 315 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 TMEM232C9JQI7 657 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 PCCAP05165 728 aaPredicted RBP13.45□□□□□ -0.26
ERBB2-206ENST00000578373 MORC3Q14149 939 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 TMEM87AQ8NBN3 555 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 ACRBPQ8NEB7 543 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 FERMT2Q96AC1 680 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 BICD1Q96G01 975 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 ZSCAN10Q96SZ4 725 aaPredicted RBP13.45□□□□□ -0.26
ERBB2-206ENST00000578373 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.45□□□□□ -0.26
ERBB2-206ENST00000578373 TSPOAP1O95153 1857 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 PNPLA6Q8IY17 1366 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 GOLGA6CA6NDK9 693 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 CYP27B1O15528 508 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 GOLGA6DP0CG33 693 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 CLEC17AQ6ZS10 378 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 CPLX4Q7Z7G2 160 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 SLC39A2Q9NP94 309 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 GOLGA6AQ9NYA3 693 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 ADCY10Q96PN6 1610 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 BUB1O43683 1085 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 POTEJP0CG39 1038 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 NONOQ15233 471 aaKnown RBP eCLIP13.45□□□□□ -0.26
ERBB2-206ENST00000578373 FNBP4Q8N3X1 1017 aaPredicted RBP13.45□□□□□ -0.26
ERBB2-206ENST00000578373 MAP3K4Q9Y6R4 1608 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 FAM13AO94988 1023 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 LCORLQ8N3X6 602 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 GPR161Q8N6U8 529 aaKnown RBP13.45□□□□□ -0.26
ERBB2-206ENST00000578373 RDH13Q8NBN7 331 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 TBC1D5Q92609 795 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 PIH1D3Q9NQM4 214 aaKnown RBP13.45□□□□□ -0.26
ERBB2-206ENST00000578373 SAR1BQ9Y6B6 198 aa13.45□□□□□ -0.26
ERBB2-206ENST00000578373 ZFYVE16Q7Z3T8 1539 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 ANKRD65E5RJM6 399 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 GCOM1H8Y6P7 765 aaPredicted RBP13.44□□□□□ -0.26
ERBB2-206ENST00000578373 CEP104O60308 925 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 MYZAPP0CAP1 466 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 GUCY2FP51841 1108 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 CHRNDQ07001 517 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 PNMA1Q8ND90 353 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 IFIH1Q9BYX4 1025 aaKnown RBP13.44□□□□□ -0.26
ERBB2-206ENST00000578373 TAOK3Q9H2K8 898 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 VEZTQ9HBM0 779 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 RPS8P62241 208 aaKnown RBP13.44□□□□□ -0.26
ERBB2-206ENST00000578373 RBL2Q08999 1139 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 CCDC174Q6PII3 467 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 STOX1Q6ZVD7 989 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 HS2ST1Q7LGA3 356 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 KSR1Q8IVT5 923 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 GOLGA6BA6NDN3 693 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 SMCO2A6NFE2 343 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 ST5P78524 1137 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 IFI16Q16666 785 aaKnown RBP13.44□□□□□ -0.26
ERBB2-206ENST00000578373 PARP10Q53GL7 1025 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 MROH5Q6ZUA9 1318 aa13.44□□□□□ -0.26
ERBB2-206ENST00000578373 CPSF1Q10570 1443 aaKnown RBP13.43□□□□□ -0.26
ERBB2-206ENST00000578373 ERVV-2B6SEH9 535 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 CLCN6P51797 869 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 USH1GQ495M9 461 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 GRIPAP1Q4V328 841 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 ZCCHC17Q9NP64 241 aaKnown RBP13.43□□□□□ -0.26
ERBB2-206ENST00000578373 A0A0G2JLW4 131 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 ATP1A2P50993 1020 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
ERBB2-206ENST00000578373 SPATA1Q5VX52 437 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 SCLT1Q96NL6 688 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 SPTLC3Q9NUV7 552 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 EPN1Q9Y6I3 576 aaPredicted RBP13.43□□□□□ -0.26
ERBB2-206ENST00000578373 EFCAB8A8MWE9 144 aa13.43□□□□□ -0.26
ERBB2-206ENST00000578373 FAM98CQ17RN3 349 aaKnown RBP13.43□□□□□ -0.26
ERBB2-206ENST00000578373 TTC31Q49AM3 519 aaPredicted RBP13.43□□□□□ -0.26
ERBB2-206ENST00000578373 FAM182BQ5T319 152 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms