RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 IL1RAPL2Q9NP60 686 aa15.25■□□□□ 0.03
SMARCD2-207ENST00000578234 A0A1W2PPC1 479 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 USP17L15C9J2P7 530 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 USP17L13C9JLJ4 530 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 USP17L11C9JVI0 530 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 USP17L18D6R9N7 530 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 USP17L22D6RA61 530 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 USP17L17D6RBQ6 530 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 USP17L19D6RCP7 530 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 USP17L20D6RJB6 530 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 SYN1P17600 705 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 PLCD1P51178 756 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 USP17L24Q0WX57 530 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 ABCB5Q2M3G0 1257 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 RPAP2Q8IXW5 612 aaPredicted RBP15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 CLASRPQ8N2M8 674 aaKnown RBP15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 KIF1BPQ96EK5 621 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 NBPF3Q9H094 633 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 PORCNQ9H237 461 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 CABP5Q9NP86 173 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 OGDHLQ9ULD0 1010 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 RABGAP1Q9Y3P9 1069 aa15.24■□□□□ 0.03
SMARCD2-207ENST00000578234 MAGEB6P1A0A0J9YX57 407 aa15.23■□□□□ 0.03
SMARCD2-207ENST00000578234 RAB3GAP1Q15042 981 aa15.23■□□□□ 0.03
SMARCD2-207ENST00000578234 MORN1Q5T089 497 aa15.23■□□□□ 0.03
SMARCD2-207ENST00000578234 SLC9C2Q5TAH2 1124 aa15.23■□□□□ 0.03
SMARCD2-207ENST00000578234 CATSPERGQ6ZRH7 1159 aa15.23■□□□□ 0.03
SMARCD2-207ENST00000578234 GPR142Q7Z601 462 aa15.23■□□□□ 0.03
SMARCD2-207ENST00000578234 PLEKHH3Q7Z736 793 aa15.23■□□□□ 0.03
SMARCD2-207ENST00000578234 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.23■□□□□ 0.03
SMARCD2-207ENST00000578234 CRNKL1Q9BZJ0 848 aaKnown RBP15.23■□□□□ 0.03
SMARCD2-207ENST00000578234 HMMRO75330 724 aa15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 POLR3DP05423 398 aaPredicted RBP15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 PRKAR2AP13861 404 aaKnown RBP15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 PDE6AP16499 860 aa15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 ZKSCAN1P17029 563 aaPredicted RBP15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 SHMT1P34896 483 aa15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 RGS2P41220 211 aa15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 MNX1P50219 401 aaPredicted RBP15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 CCNA1P78396 465 aa15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 GABPAQ06546 454 aa15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 LBX2Q6XYB7 198 aa15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 SLC17A8Q8NDX2 589 aa15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 C11orf49Q9H6J7 331 aa15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 DDX19BQ9UMR2 479 aa15.22■□□□□ 0.03
SMARCD2-207ENST00000578234 ALPK3Q96L96 1907 aa15.21■□□□□ 0.03
SMARCD2-207ENST00000578234 RAB11FIP3O75154 756 aa15.21■□□□□ 0.03
SMARCD2-207ENST00000578234 GLRX3O76003 335 aaKnown RBP15.21■□□□□ 0.03
SMARCD2-207ENST00000578234 VCAM1P19320 739 aa15.21■□□□□ 0.03
SMARCD2-207ENST00000578234 CACNB2Q08289 660 aaPredicted RBP15.21■□□□□ 0.03
SMARCD2-207ENST00000578234 C20orf194Q5TEA3 1177 aa15.21■□□□□ 0.03
SMARCD2-207ENST00000578234 ACER1Q8TDN7 264 aa15.21■□□□□ 0.03
SMARCD2-207ENST00000578234 LRCH3Q96II8 777 aa15.21■□□□□ 0.03
SMARCD2-207ENST00000578234 APBA2Q99767 749 aa15.21■□□□□ 0.03
SMARCD2-207ENST00000578234 ZBTB40Q9NUA8 1239 aa15.21■□□□□ 0.03
SMARCD2-207ENST00000578234 MCM9Q9NXL9 1143 aa15.21■□□□□ 0.03
SMARCD2-207ENST00000578234 COG6Q9Y2V7 657 aa15.21■□□□□ 0.03
SMARCD2-207ENST00000578234 ZNF532Q9HCE3 1301 aa15.2■□□□□ 0.02
SMARCD2-207ENST00000578234 TCRBV5S4A2TA0A5A2 114 aa15.2■□□□□ 0.02
SMARCD2-207ENST00000578234 APBB1O00213 710 aa15.2■□□□□ 0.02
SMARCD2-207ENST00000578234 GOLIM4O00461 696 aa15.2■□□□□ 0.02
SMARCD2-207ENST00000578234 CNMDO75829 334 aa15.2■□□□□ 0.02
SMARCD2-207ENST00000578234 IFIT2P09913 472 aaKnown RBP15.2■□□□□ 0.02
SMARCD2-207ENST00000578234 CNGA1P29973 690 aa15.2■□□□□ 0.02
SMARCD2-207ENST00000578234 GUCY1A2P33402 732 aa15.2■□□□□ 0.02
SMARCD2-207ENST00000578234 MAP2K5Q13163 448 aa15.2■□□□□ 0.02
SMARCD2-207ENST00000578234 CCL14Q16627 93 aa15.2■□□□□ 0.02
SMARCD2-207ENST00000578234 SAMD1Q6SPF0 538 aaPredicted RBP15.2■□□□□ 0.02
SMARCD2-207ENST00000578234 SIRT2Q8IXJ6 389 aa15.2■□□□□ 0.02
SMARCD2-207ENST00000578234 DDX60LQ5H9U9 1706 aaKnown RBP15.2■□□□□ 0.02
SMARCD2-207ENST00000578234 MPHOSPH10O00566 681 aaKnown RBP15.19■□□□□ 0.02
SMARCD2-207ENST00000578234 BMP8BP34820 402 aa15.19■□□□□ 0.02
SMARCD2-207ENST00000578234 SEPT2Q15019 361 aa15.19■□□□□ 0.02
SMARCD2-207ENST00000578234 EDC3Q96F86 508 aaKnown RBP15.19■□□□□ 0.02
SMARCD2-207ENST00000578234 DNAJC2Q99543 621 aaKnown RBP15.19■□□□□ 0.02
SMARCD2-207ENST00000578234 GDF15Q99988 308 aa15.19■□□□□ 0.02
SMARCD2-207ENST00000578234 CHMP4BQ9H444 224 aaKnown RBP15.19■□□□□ 0.02
SMARCD2-207ENST00000578234 DCP1AQ9NPI6 582 aaPredicted RBP15.19■□□□□ 0.02
SMARCD2-207ENST00000578234 LAMA3Q16787 3333 aa15.19■□□□□ 0.02
SMARCD2-207ENST00000578234 SLC15A5A6NIM6 579 aa15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 SOX1O00570 391 aaPredicted RBP15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 MYCNP04198 464 aaPredicted RBP15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 HOXC6P09630 235 aa15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 PTPREP23469 700 aa15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 CCND3P30281 292 aaPredicted RBP15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 RRP1P56182 461 aaKnown RBP15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 LHX8Q68G74 356 aa15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 LCORLQ8N3X6 602 aa15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 SDR42E1Q8WUS8 393 aa15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 RPAP3Q9H6T3 665 aaPredicted RBP15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 HOXC10Q9NYD6 342 aa15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 BTBD7Q9P203 1132 aa15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 SWAP70Q9UH65 585 aa15.18■□□□□ 0.02
SMARCD2-207ENST00000578234 NAV1Q8NEY1 1877 aa15.17■□□□□ 0.02
SMARCD2-207ENST00000578234 A0A1W2PRG0 241 aa15.17■□□□□ 0.02
SMARCD2-207ENST00000578234 SPDYE16A6NNV3 312 aaPredicted RBP15.17■□□□□ 0.02
SMARCD2-207ENST00000578234 COL6A1P12109 1028 aa15.17■□□□□ 0.02
SMARCD2-207ENST00000578234 ATP5JP18859 108 aa15.17■□□□□ 0.02
SMARCD2-207ENST00000578234 COG2Q14746 738 aa15.17■□□□□ 0.02
SMARCD2-207ENST00000578234 MFSD14CQ5VZR4 134 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms