RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 C16orf86Q6ZW13 317 aa13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 ANKRD13CQ8N6S4 541 aa13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 KIAA1683Q9H0B3 1180 aa13.11□□□□□ -0.31
PPP4R1-208ENST00000578178 GREB1LQ9C091 1923 aaPredicted RBP13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 GSG1L2A8MUP6 293 aa13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 IGHDP01880 384 aa13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 HOXD10P28358 340 aa13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 SEPT2Q15019 361 aa13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 ZYXQ15942 572 aaKnown RBP13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 SLC9C1Q4G0N8 1177 aa13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 ZMYM1Q5SVZ6 1142 aa13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 CTR9Q6PD62 1173 aa13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 EVI5LQ96CN4 794 aa13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 EPB41L4AQ9HCS5 686 aaPredicted RBP13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 EMILIN3Q9NT22 766 aa13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 SRRDQ9UH36 339 aa13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 MYPNQ86TC9 1320 aa13.1□□□□□ -0.31
PPP4R1-208ENST00000578178 SMIM22K7EJ46 135 aa13.09□□□□□ -0.31
PPP4R1-208ENST00000578178 AKR1B1P15121 316 aa13.09□□□□□ -0.31
PPP4R1-208ENST00000578178 TDO2P48775 406 aa13.09□□□□□ -0.31
PPP4R1-208ENST00000578178 CDK8P49336 464 aa13.09□□□□□ -0.31
PPP4R1-208ENST00000578178 SBK1Q52WX2 424 aa13.09□□□□□ -0.31
PPP4R1-208ENST00000578178 B4GALNT3Q6L9W6 998 aa13.09□□□□□ -0.31
PPP4R1-208ENST00000578178 CHD1LQ86WJ1 897 aa13.09□□□□□ -0.31
PPP4R1-208ENST00000578178 ACER1Q8TDN7 264 aa13.09□□□□□ -0.31
PPP4R1-208ENST00000578178 ZNF333Q96JL9 665 aa13.09□□□□□ -0.31
PPP4R1-208ENST00000578178 CCDC17Q96LX7 622 aa13.09□□□□□ -0.31
PPP4R1-208ENST00000578178 SEC62Q99442 399 aaKnown RBP13.09□□□□□ -0.31
PPP4R1-208ENST00000578178 KIAA0100Q14667 2235 aaKnown RBP13.09□□□□□ -0.31
PPP4R1-208ENST00000578178 TNPO2O14787 897 aaKnown RBP13.08□□□□□ -0.32
PPP4R1-208ENST00000578178 VCAM1P19320 739 aa13.08□□□□□ -0.32
PPP4R1-208ENST00000578178 HERVK_113P62684 666 aa13.08□□□□□ -0.32
PPP4R1-208ENST00000578178 NUCB1Q02818 461 aa13.08□□□□□ -0.32
PPP4R1-208ENST00000578178 MLLT1Q03111 559 aaPredicted RBP13.08□□□□□ -0.32
PPP4R1-208ENST00000578178 ICA1Q05084 483 aa13.08□□□□□ -0.32
PPP4R1-208ENST00000578178 PRKCZQ05513 592 aa13.08□□□□□ -0.32
PPP4R1-208ENST00000578178 NBPF11Q86T75 865 aa13.08□□□□□ -0.32
PPP4R1-208ENST00000578178 RAET1EQ8TD07 263 aa13.08□□□□□ -0.32
PPP4R1-208ENST00000578178 GTF3C2Q8WUA4 911 aaPredicted RBP13.08□□□□□ -0.32
PPP4R1-208ENST00000578178 MORF4L1Q9UBU8 362 aa13.08□□□□□ -0.32
PPP4R1-208ENST00000578178 DOCK3Q8IZD9 2030 aa13.08□□□□□ -0.32
PPP4R1-208ENST00000578178 USP17L15C9J2P7 530 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 USP17L13C9JLJ4 530 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 USP17L11C9JVI0 530 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 USP17L18D6R9N7 530 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 USP17L22D6RA61 530 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 USP17L17D6RBQ6 530 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 USP17L19D6RCP7 530 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 USP17L20D6RJB6 530 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 APPP05067 770 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 IRX6P78412 446 aaPredicted RBP13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 USP17L24Q0WX57 530 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 CLEC10AQ8IUN9 316 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 P2RX7Q99572 595 aaKnown RBP13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 NACAP1Q9BZK3 213 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 SH2D4AQ9H788 454 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 ARHGEF10LQ9HCE6 1279 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 A0A0G2JMZ2 1700 aa13.07□□□□□ -0.32
PPP4R1-208ENST00000578178 CENPFP49454 3210 aa13.06□□□□□ -0.32
PPP4R1-208ENST00000578178 A0A1W2PRG0 241 aa13.06□□□□□ -0.32
PPP4R1-208ENST00000578178 MINDY4BA8MYZ0 360 aa13.06□□□□□ -0.32
PPP4R1-208ENST00000578178 PATL2C9JE40 543 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-208ENST00000578178 TICAM2Q86XR7 235 aa13.06□□□□□ -0.32
PPP4R1-208ENST00000578178 IFNL3Q8IZI9 196 aa13.06□□□□□ -0.32
PPP4R1-208ENST00000578178 SH3TC2Q8TF17 1288 aa13.06□□□□□ -0.32
PPP4R1-208ENST00000578178 COA7Q96BR5 231 aa13.06□□□□□ -0.32
PPP4R1-208ENST00000578178 OSBPL3Q9H4L5 887 aa13.06□□□□□ -0.32
PPP4R1-208ENST00000578178 RPAP3Q9H6T3 665 aaPredicted RBP13.06□□□□□ -0.32
PPP4R1-208ENST00000578178 PARP14Q460N5 1801 aa13.06□□□□□ -0.32
PPP4R1-208ENST00000578178 PLXNB2O15031 1838 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 GRK4P32298 578 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 FLT3LGP49771 235 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 IRF5Q13568 498 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 CATSPERGQ6ZRH7 1159 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 CCDC129Q6ZRS4 1044 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 PLEKHM2Q8IWE5 1019 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 SLAIN1Q8ND83 568 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 LPAR1Q92633 364 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 PAGR1Q9BTK6 254 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 NAPBQ9H115 298 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 ZNF287Q9HBT7 754 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 TXNRD2Q9NNW7 524 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 GABRQQ9UN88 632 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 TMX2Q9Y320 296 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 RLFQ13129 1914 aa13.05□□□□□ -0.32
PPP4R1-208ENST00000578178 MYH4Q9Y623 1939 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 POTEFA5A3E0 1075 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 TRIM6-TRIM34B2RNG4 842 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 FOXP2O15409 715 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 RASA1P20936 1047 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 ERVK-9P63128 1117 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 ERVK-24P63145 666 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 STK11IPQ8N1F8 1099 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 GPRC5AQ8NFJ5 357 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 VCPKMTQ9H867 229 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 KANSL2Q9H9L4 492 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 MKNK2Q9HBH9 465 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 HELLSQ9NRZ9 838 aa13.04□□□□□ -0.32
PPP4R1-208ENST00000578178 RBPJLQ9UBG7 517 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms