RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 FRAT1Q92837 279 aaPredicted RBP14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 EDC3Q96F86 508 aaKnown RBP14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 C12orf42Q96LP6 360 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 LBHD1Q9BQE6 289 aaPredicted RBP14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 DBNDD2Q9BQY9 259 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 IVNS1ABPQ9Y6Y0 642 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 UNC80Q8N2C7 3258 aa14.23□□□□□ -0.13
CTDNEP1-212ENST00000576613 CYP7A1P22680 504 aa14.22□□□□□ -0.13
CTDNEP1-212ENST00000576613 ZAP70P43403 619 aa14.22□□□□□ -0.13
CTDNEP1-212ENST00000576613 USP5P45974 858 aa14.22□□□□□ -0.13
CTDNEP1-212ENST00000576613 MDM2Q00987 491 aaPredicted RBP14.22□□□□□ -0.13
CTDNEP1-212ENST00000576613 ZYXQ15942 572 aaKnown RBP14.22□□□□□ -0.13
CTDNEP1-212ENST00000576613 EHD4Q9H223 541 aa14.22□□□□□ -0.13
CTDNEP1-212ENST00000576613 SERPINB13Q9UIV8 391 aa14.22□□□□□ -0.13
CTDNEP1-212ENST00000576613 SLC15A5A6NIM6 579 aa14.21□□□□□ -0.13
CTDNEP1-212ENST00000576613 IDH1O75874 414 aaKnown RBP14.21□□□□□ -0.13
CTDNEP1-212ENST00000576613 DYNLL1P63167 89 aaKnown RBP14.21□□□□□ -0.13
CTDNEP1-212ENST00000576613 POLA2Q14181 598 aa14.21□□□□□ -0.13
CTDNEP1-212ENST00000576613 RAB3GAP1Q15042 981 aa14.21□□□□□ -0.13
CTDNEP1-212ENST00000576613 TATDN1Q6P1N9 297 aa14.21□□□□□ -0.13
CTDNEP1-212ENST00000576613 CLUAP1Q96AJ1 413 aa14.21□□□□□ -0.13
CTDNEP1-212ENST00000576613 SENP6Q9GZR1 1112 aaPredicted RBP14.21□□□□□ -0.13
CTDNEP1-212ENST00000576613 KIAA1683Q9H0B3 1180 aa14.21□□□□□ -0.13
CTDNEP1-212ENST00000576613 PIH1D3Q9NQM4 214 aaKnown RBP14.21□□□□□ -0.13
CTDNEP1-212ENST00000576613 PRKAG2Q9UGJ0 569 aa14.21□□□□□ -0.13
CTDNEP1-212ENST00000576613 DDX20Q9UHI6 824 aaKnown RBP14.21□□□□□ -0.13
CTDNEP1-212ENST00000576613 LAMA2P24043 3122 aaKnown RBP14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 SURF6O75683 361 aaKnown RBP14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 VCAM1P19320 739 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 PTPREP23469 700 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 CNGA1P29973 690 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 ATP2B2Q01814 1243 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 ABCB5Q2M3G0 1257 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 CERKLQ49MI3 558 aaPredicted RBP14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 TMED8Q6PL24 325 aaPredicted RBP14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 POTEEQ6S8J3 1075 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 LBX2Q6XYB7 198 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 CATSPERGQ6ZRH7 1159 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 TTC6Q86TZ1 520 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 MIGA1Q8NAN2 632 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 SSH3Q8TE77 659 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 LPAR1Q92633 364 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 CABP5Q9NP86 173 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 NDUFB9Q9Y6M9 179 aa14.2□□□□□ -0.14
CTDNEP1-212ENST00000576613 DNM1LO00429 736 aa14.19□□□□□ -0.14
CTDNEP1-212ENST00000576613 CNMDO75829 334 aa14.19□□□□□ -0.14
CTDNEP1-212ENST00000576613 HOXC6P09630 235 aa14.19□□□□□ -0.14
CTDNEP1-212ENST00000576613 GRB14Q14449 540 aa14.19□□□□□ -0.14
CTDNEP1-212ENST00000576613 FAM109BQ6ICB4 259 aaPredicted RBP14.19□□□□□ -0.14
CTDNEP1-212ENST00000576613 FLRT1Q9NZU1 646 aa14.19□□□□□ -0.14
CTDNEP1-212ENST00000576613 DBNLQ9UJU6 430 aaKnown RBP14.19□□□□□ -0.14
CTDNEP1-212ENST00000576613 TNNQ9UQP3 1299 aa14.19□□□□□ -0.14
CTDNEP1-212ENST00000576613 ZNF236Q9UL36 1845 aa14.19□□□□□ -0.14
CTDNEP1-212ENST00000576613 BCAR3O75815 825 aa14.18□□□□□ -0.14
CTDNEP1-212ENST00000576613 ATP8B2P98198 1209 aa14.18□□□□□ -0.14
CTDNEP1-212ENST00000576613 MAP3K12Q12852 859 aa14.18□□□□□ -0.14
CTDNEP1-212ENST00000576613 TMEM57Q8N5G2 664 aa14.18□□□□□ -0.14
CTDNEP1-212ENST00000576613 MAGEB6Q8N7X4 407 aa14.18□□□□□ -0.14
CTDNEP1-212ENST00000576613 RPAP3Q9H6T3 665 aaPredicted RBP14.18□□□□□ -0.14
CTDNEP1-212ENST00000576613 NAV1Q8NEY1 1877 aa14.17□□□□□ -0.14
CTDNEP1-212ENST00000576613 POTEB2H3BUK9 544 aa14.17□□□□□ -0.14
CTDNEP1-212ENST00000576613 CYP2C19P33261 490 aa14.17□□□□□ -0.14
CTDNEP1-212ENST00000576613 ATN1P54259 1190 aaPredicted RBP14.17□□□□□ -0.14
CTDNEP1-212ENST00000576613 ZKSCAN2Q63HK3 967 aa14.17□□□□□ -0.14
CTDNEP1-212ENST00000576613 ARRDC4Q8NCT1 418 aa14.17□□□□□ -0.14
CTDNEP1-212ENST00000576613 BTBD7Q9P203 1132 aa14.17□□□□□ -0.14
CTDNEP1-212ENST00000576613 LTBP2Q14767 1821 aa14.17□□□□□ -0.14
CTDNEP1-212ENST00000576613 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
CTDNEP1-212ENST00000576613 STRNO43815 780 aa14.16□□□□□ -0.14
CTDNEP1-212ENST00000576613 ZNF697Q5TEC3 545 aa14.16□□□□□ -0.14
CTDNEP1-212ENST00000576613 DPP9Q86TI2 863 aa14.16□□□□□ -0.14
CTDNEP1-212ENST00000576613 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.16□□□□□ -0.14
CTDNEP1-212ENST00000576613 ACER1Q8TDN7 264 aa14.16□□□□□ -0.14
CTDNEP1-212ENST00000576613 CCDC8Q9H0W5 538 aaPredicted RBP14.16□□□□□ -0.14
CTDNEP1-212ENST00000576613 TLR7Q9NYK1 1049 aaKnown RBP14.16□□□□□ -0.14
CTDNEP1-212ENST00000576613 NOP58Q9Y2X3 529 aaKnown RBP14.16□□□□□ -0.14
CTDNEP1-212ENST00000576613 A0A0G2JMZ2 1700 aa14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 KBTBD13C9JR72 458 aa14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 POLR3DP05423 398 aaPredicted RBP14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 CYBAP13498 195 aa14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 SHMT1P34896 483 aa14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 RTP1P59025 263 aa14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 OLFML2BQ68BL8 750 aa14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 FTSJ3Q8IY81 847 aaKnown RBP14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 NPLOC4Q8TAT6 608 aa14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 EAF2Q96CJ1 260 aaPredicted RBP14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 GUCD1Q96NT3 240 aa14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 SLC5A4Q9NY91 659 aa14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 HOXC10Q9NYD6 342 aa14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 ATP11BQ9Y2G3 1177 aa14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 RLFQ13129 1914 aa14.15□□□□□ -0.14
CTDNEP1-212ENST00000576613 ADORA2AP29274 412 aa14.14□□□□□ -0.15
CTDNEP1-212ENST00000576613 PLCD1P51178 756 aa14.14□□□□□ -0.15
CTDNEP1-212ENST00000576613 COG2Q14746 738 aa14.14□□□□□ -0.15
CTDNEP1-212ENST00000576613 GJC2Q5T442 439 aaPredicted RBP14.14□□□□□ -0.15
CTDNEP1-212ENST00000576613 FAM161BQ96MY7 647 aa14.14□□□□□ -0.15
CTDNEP1-212ENST00000576613 COL25A1Q9BXS0 654 aaPredicted RBP14.14□□□□□ -0.15
CTDNEP1-212ENST00000576613 TANGO6Q9C0B7 1094 aa14.14□□□□□ -0.15
CTDNEP1-212ENST00000576613 C1orf115Q9H7X2 142 aa14.14□□□□□ -0.15
CTDNEP1-212ENST00000576613 MAGEB6P1A0A0J9YX57 407 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms