RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 USP17L24Q0WX57 530 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 RASGRF1Q13972 1273 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 LRRC41Q15345 812 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 RAB30Q15771 203 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 CCDC85BQ15834 202 aaPredicted RBP7.29□□□□□ -1.24
SMG6-219ENST00000575663 TMEM31Q5JXX7 168 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 ANO1Q5XXA6 986 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 CCDC102BQ68D86 513 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 TEX11Q8IYF3 940 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 TRPV1Q8NER1 839 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 FERMT2Q96AC1 680 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 PRDM12Q9H4Q4 367 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 TMEM39AQ9NV64 488 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 CXXC1Q9P0U4 656 aaPredicted RBP7.29□□□□□ -1.24
SMG6-219ENST00000575663 ZBTB21Q9ULJ3 1066 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 NDUFB9Q9Y6M9 179 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 DNAH12Q6ZR08 3092 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 FRMPD3Q5JV73 1810 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 MYH13Q9UKX3 1938 aa7.29□□□□□ -1.24
SMG6-219ENST00000575663 GDF11O95390 407 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 HLA-DOAP06340 250 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 RARBP10826 455 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 ITGB8P26012 769 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 ADORA2AP29274 412 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 IL15P40933 162 aaPredicted RBP7.28□□□□□ -1.24
SMG6-219ENST00000575663 EPHB4P54760 987 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 DDX10Q13206 875 aaKnown RBP7.28□□□□□ -1.24
SMG6-219ENST00000575663 PPIGQ13427 754 aaKnown RBP eCLIP7.28□□□□□ -1.245e-6■■□□□ 13.2
SMG6-219ENST00000575663 RRP1BQ14684 758 aaKnown RBP7.28□□□□□ -1.24
SMG6-219ENST00000575663 MVPQ14764 893 aaKnown RBP7.28□□□□□ -1.24
SMG6-219ENST00000575663 FAM47AQ5JRC9 791 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 PSRC1Q6PGN9 363 aaPredicted RBP7.28□□□□□ -1.24
SMG6-219ENST00000575663 ATF7IPQ6VMQ6 1270 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 LBX2Q6XYB7 198 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 ATG9AQ7Z3C6 839 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 RNF180Q86T96 592 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 NPLOC4Q8TAT6 608 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 C12orf42Q96LP6 360 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 LRFN3Q9BTN0 628 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 PBX4Q9BYU1 374 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 SIL1Q9H173 461 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 MTIF3Q9H2K0 278 aaKnown RBP7.28□□□□□ -1.24
SMG6-219ENST00000575663 PRKRIP1Q9H875 184 aaPredicted RBP7.28□□□□□ -1.24
SMG6-219ENST00000575663 MSRAQ9UJ68 235 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 PHF24Q9UPV7 400 aa7.28□□□□□ -1.24
SMG6-219ENST00000575663 DOCK3Q8IZD9 2030 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 A0A1W2PQ45 241 aaPredicted RBP7.27□□□□□ -1.25
SMG6-219ENST00000575663 A0A1W2PQY0 241 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 DCDC2CA8MYV0 355 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 APBB1O00213 710 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 STRNO43815 780 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 CNMDO75829 334 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 BAG3O95817 575 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 PLCG2P16885 1265 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 RFX5P48382 616 aaPredicted RBP7.27□□□□□ -1.25
SMG6-219ENST00000575663 SKIV2LQ15477 1246 aaKnown RBP7.27□□□□□ -1.25
SMG6-219ENST00000575663 ZYXQ15942 572 aaKnown RBP7.27□□□□□ -1.25
SMG6-219ENST00000575663 WDR63Q8IWG1 891 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 SLC44A5Q8NCS7 719 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.27□□□□□ -1.258e-7■■■■■ 32.7
SMG6-219ENST00000575663 SLC28A3Q9HAS3 691 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 XPNPEP3Q9NQH7 507 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 EMILIN3Q9NT22 766 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 RAI14Q9P0K7 980 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 PTPRCP08575 1304 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 MROH7Q68CQ1 1323 aa7.27□□□□□ -1.25
SMG6-219ENST00000575663 XIRP2A4UGR9 3374 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 ROBO3Q96MS0 1386 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 SPDYE16A6NNV3 312 aaPredicted RBP7.26□□□□□ -1.25
SMG6-219ENST00000575663 VCAM1P19320 739 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 ADORA1P30542 326 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 PBX2P40425 430 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 ADGRE1Q14246 886 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 MFSD5Q6N075 450 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 CATSPERGQ6ZRH7 1159 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 ANKRD33Q7Z3H0 272 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 ALYREFQ86V81 257 aaKnown RBP7.26□□□□□ -1.25
SMG6-219ENST00000575663 FOXP4Q8IVH2 680 aaPredicted RBP7.26□□□□□ -1.25
SMG6-219ENST00000575663 MICALL1Q8N3F8 863 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 TMEM199Q8N511 208 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 NUP133Q8WUM0 1156 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 NSUN4Q96CB9 384 aaKnown RBP7.26□□□□□ -1.25
SMG6-219ENST00000575663 SNX27Q96L92 541 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 TOX2Q96NM4 488 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 NECAB3Q96P71 396 aaPredicted RBP7.26□□□□□ -1.25
SMG6-219ENST00000575663 DNAJC18Q9H819 358 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 STARD7Q9NQZ5 370 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 BTBD7Q9P203 1132 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 NRBP1Q9UHY1 535 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 AKAP2Q9Y2D5 859 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 CACNA1FO60840 1977 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 FLT1P17948 1338 aa7.26□□□□□ -1.25
SMG6-219ENST00000575663 ATAD5Q96QE3 1844 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 TIMP1P01033 207 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 GH2P01242 217 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 IGHA2P01877 340 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 BMP1P13497 986 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 FAAP100Q0VG06 881 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 PPP2R2DQ66LE6 453 aa7.25□□□□□ -1.25
SMG6-219ENST00000575663 METTL16Q86W50 562 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms