RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 TEX13AQ9BXU3 409 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 TBC1D12O60347 775 aa17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 LONP1P36776 959 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 BACH2Q9BYV9 841 aa17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 HACD3Q9P035 362 aa17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 IFNKQ9P0W0 207 aa17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 CHPF2Q9P2E5 772 aa17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 S100BP04271 92 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 IQCB1Q15051 598 aa17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 CCDC186Q7Z3E2 898 aa17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 ABI1Q8IZP0 508 aa17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 GNPATO15228 680 aa17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 CCDC105Q8IYK2 499 aa17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 GDAP1L1Q96MZ0 367 aa17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 CCDC94Q9BW85 323 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-202ENST00000573710 PYGLP06737 847 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 UBE3AQ05086 875 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 PDE4DQ08499 809 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 TEX11Q8IYF3 940 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 PLCB1Q9NQ66 1216 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 SCAPERQ9BY12 1400 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 ZBTB17Q13105 803 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 ARHGEF1Q92888 912 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 DIAPH2O60879 1101 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 IFNB1P01574 187 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 ZSCAN23Q3MJ62 389 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 ATP6V0A1Q93050 837 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 FAM83GA6ND36 823 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 CFBP00751 764 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 UFL1O94874 794 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 MKRN3Q13064 507 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 RCN2Q14257 317 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 DYMQ7RTS9 669 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 LARGE2Q8N3Y3 721 aa17.5■□□□□ 0.39
CACNA1A-202ENST00000573710 ARHGAP24Q8N264 748 aa17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 RBM17Q96I25 401 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 TSR3Q9UJK0 312 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 SLC13A4Q9UKG4 626 aa17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 INPP5BP32019 993 aa17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 MYOM3Q5VTT5 1437 aa17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 TPTE2Q6XPS3 522 aa17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 SSH1Q8WYL5 1049 aa17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 CTTNBP2NLQ9P2B4 639 aa17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 CEBPAP49715 358 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 DDB1Q16531 1140 aa17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 FAM102BQ5T8I3 360 aa17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 DNM1Q05193 864 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 PPP2R5EQ16537 467 aa17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 C1orf228Q6PIY5 440 aa17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 HINFPQ9BQA5 517 aa17.49■□□□□ 0.39
CACNA1A-202ENST00000573710 HPS4Q9NQG7 708 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 PNMA2Q9UL42 364 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 TESPA1A2RU30 521 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 DENND2CQ68D51 928 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 B4GALNT4Q76KP1 1039 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 COG4Q9H9E3 785 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 ACTN4O43707 911 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 CACTINQ8WUQ7 758 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 SLC4A7Q9Y6M7 1214 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 SNRPA1P09661 255 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 TTBK2Q6IQ55 1244 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 HDXQ7Z353 690 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 CCDC13Q8IYE1 715 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 CABLES1Q8TDN4 633 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 MRPS27Q92552 414 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 INTUQ9ULD6 942 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 ATF7P17544 494 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 MCMDC2Q4G0Z9 681 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 GDAP1Q8TB36 358 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 FGD5Q6ZNL6 1462 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 USP48Q86UV5 1035 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 XAGE3Q8WTP9 111 aa17.48■□□□□ 0.39
CACNA1A-202ENST00000573710 ZBED4O75132 1171 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 TBC1D9Q6ZT07 1266 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 MLXIPQ9HAP2 919 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 RTL9Q8NET4 1388 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 RNASELQ05823 741 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 NELFCDQ8IXH7 590 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 EYA3Q99504 573 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 DACT1Q9NYF0 836 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 VCPP55072 806 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 UHMK1Q8TAS1 419 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 RASSF2P50749 326 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 BMP15O95972 392 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 ARHGDIAP52565 204 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 PPP2R3AQ06190 1150 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 TBC1D10BQ4KMP7 808 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 LGSNQ5TDP6 509 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 C8orf74Q6P047 294 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 SMAP1Q8IYB5 467 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 POLR3CQ9BUI4 534 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 RASSF4Q9H2L5 321 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
CACNA1A-202ENST00000573710 CCDC61Q9Y6R9 512 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms