RNA–Protein interactions for RNA: ENST00000568346.1

KLHDC4-221, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 343 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-221ENST00000568346 CLIP2Q9UDT6 1046 aa9.87□□□□□ -0.83
KLHDC4-221ENST00000568346 CEP131Q9UPN4 1083 aa9.87□□□□□ -0.83
KLHDC4-221ENST00000568346 IQSEC3Q9UPP2 1182 aaPredicted RBP9.87□□□□□ -0.83
KLHDC4-221ENST00000568346 COL11A2P13942 1736 aaPredicted RBP9.87□□□□□ -0.83
KLHDC4-221ENST00000568346 MYH4Q9Y623 1939 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 UQCRHLA0A096LP55 91 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 MINDY4BA8MYZ0 360 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 UQCRHP07919 91 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 KLRK1P26718 216 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 GUCY1A2P33402 732 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 TOB1P50616 345 aaPredicted RBP9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 GSDMDP57764 484 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 TPM4P67936 248 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 MECOMQ03112 1051 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 TROAPQ12815 778 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 NCAPHQ15003 741 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 ZRSR1Q15695 479 aaKnown RBP9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 ZNF827Q17R98 1081 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 DPCR1Q3MIW9 517 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 IFIT1BQ5T764 474 aaKnown RBP9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 CTR9Q6PD62 1173 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 KRBA2Q6ZNG9 492 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 BICDL1Q6ZP65 573 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 TMTC3Q6ZXV5 915 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 C10orf71Q711Q0 1435 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 CATIPQ7Z7H3 387 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 AOPEPQ8N6M6 819 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 ARHGEF1Q92888 912 aaKnown RBP9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 DCP1AQ9NPI6 582 aaPredicted RBP9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 BAZ2BQ9UIF8 2168 aaKnown RBP9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 FBXO2Q9UK22 296 aaPredicted RBP9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 ARFGEF1Q9Y6D6 1849 aa9.86□□□□□ -0.83
KLHDC4-221ENST00000568346 XDHP47989 1333 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 PSME4Q14997 1843 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 BTBD18B2RXH4 712 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 MARCKSP29966 332 aaPredicted RBP9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 KCNJ6P48051 423 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 AKAP17AQ02040 695 aaKnown RBP9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 PKN1Q16512 942 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 CCDC144BQ3MJ40 725 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 CCDC178Q5BJE1 867 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 NT5DC1Q5TFE4 455 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 FAM177A1Q8N128 213 aaPredicted RBP9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 STK11IPQ8N1F8 1099 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 TRIML1Q8N9V2 468 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 WDR66Q8TBY9 1149 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 ANKS1AQ92625 1134 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 ZKSCAN3Q9BRR0 538 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 PHF20Q9BVI0 1012 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 FAM13BQ9NYF5 915 aa9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 MKRN1Q9UHC7 482 aaKnown RBP9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 HOOK1Q9UJC3 728 aaKnown RBP9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 SRPRBQ9Y5M8 271 aaKnown RBP9.85□□□□□ -0.83
KLHDC4-221ENST00000568346 PITPNM2Q9BZ72 1349 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 USP17L12C9JPN9 530 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 USP17L21D6R901 530 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 UBE2Q2LH0YL09 131 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 RRP9O43818 475 aaKnown RBP9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 PRDX5P30044 214 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 KRT2P35908 639 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 PPP4CP60510 307 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 GSTO1P78417 241 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 PDE4BQ07343 736 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 CRY2Q49AN0 593 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 CT47A1Q5JQC4 288 aaPredicted RBP9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 METTL16Q86W50 562 aaKnown RBP9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 DRC7Q8IY82 874 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 NUP133Q8WUM0 1156 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 CACTINQ8WUQ7 758 aaKnown RBP9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 TNFRSF25Q93038 417 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 SHISA4Q96DD7 197 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 AATFQ9NY61 560 aaKnown RBP eCLIP9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 KCNH3Q9ULD8 1083 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 KCNJ14Q9UNX9 436 aa9.84□□□□□ -0.83
KLHDC4-221ENST00000568346 SNED1Q8TER0 1413 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 WTIPA6NIX2 430 aaPredicted RBP9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 HMGB2P26583 209 aaKnown RBP9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 RFC4P35249 363 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 TRAPPC10P48553 1259 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 KCNQ4P56696 695 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 CCZ1BP86790 482 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 CCZ1P86791 482 aaPredicted RBP9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 MYL5Q02045 173 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 NFIXQ14938 502 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 NPY5RQ15761 445 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 DNTTIP2Q5QJE6 756 aaKnown RBP9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 TRAPPC3LQ5T215 181 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 KANK3Q6NY19 840 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 AMIGO3Q86WK7 504 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 LRRC8AQ8IWT6 810 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 CNBD1Q8NA66 436 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 CCDC150Q8NCX0 1101 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 CTCFLQ8NI51 663 aaPredicted RBP9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 MAP7D2Q96T17 732 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 BRMS1Q9HCU9 246 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 TCP11L1Q9NUJ3 509 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 NRBP1Q9UHY1 535 aa9.83□□□□□ -0.84
KLHDC4-221ENST00000568346 SIPA1L1O43166 1804 aa9.82□□□□□ -0.84
KLHDC4-221ENST00000568346 CYP2D7A0A087X1C5 515 aa9.82□□□□□ -0.84
KLHDC4-221ENST00000568346 TRIM75PA6NK02 468 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms