RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 TRPC5Q9UL62 973 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-210ENST00000567654 ANKRD31Q8N7Z5 1873 aa7.02□□□□□ -1.29
SF3B3-210ENST00000567654 USP42Q9H9J4 1324 aaKnown RBP7.01□□□□□ -1.29
SF3B3-210ENST00000567654 RIC1Q4ADV7 1423 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 CAMTA2O94983 1202 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 PDIA4P13667 645 aaKnown RBP7.01□□□□□ -1.29
SF3B3-210ENST00000567654 CD33P20138 364 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 TRIM28Q13263 835 aaKnown RBP7.01□□□□□ -1.29
SF3B3-210ENST00000567654 OS9Q13438 667 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-210ENST00000567654 C11orf91Q3C1V1 193 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-210ENST00000567654 NLRP8Q86W28 1048 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 ETFBKMTQ8IXQ9 262 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 ZNF34Q8IZ26 560 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 COL26A1Q96A83 441 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 FAM89AQ96GI7 184 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 CEP63Q96MT8 703 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 CNTNAP3BQ96NU0 1288 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 CNTNAP3Q9BZ76 1288 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 C22orf23Q9BZE7 217 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 CCDC8Q9H0W5 538 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-210ENST00000567654 PCDHGC4Q9Y5F7 938 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 ZNF609O15014 1411 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 AOX1Q06278 1338 aa7.01□□□□□ -1.29
SF3B3-210ENST00000567654 RGPD3A6NKT7 1758 aaPredicted RBP7□□□□□ -1.29
SF3B3-210ENST00000567654 RGPD4Q7Z3J3 1758 aa7□□□□□ -1.29
SF3B3-210ENST00000567654 ZBTB39O15060 712 aa7□□□□□ -1.29
SF3B3-210ENST00000567654 PCCAP05165 728 aaPredicted RBP7□□□□□ -1.29
SF3B3-210ENST00000567654 MAPTP10636 758 aaKnown RBP7□□□□□ -1.29
SF3B3-210ENST00000567654 TNP2Q05952 138 aa7□□□□□ -1.29
SF3B3-210ENST00000567654 TFCP2Q12800 502 aa7□□□□□ -1.29
SF3B3-210ENST00000567654 SFSWAPQ12872 951 aaKnown RBP7□□□□□ -1.29
SF3B3-210ENST00000567654 LRRC24Q50LG9 513 aa7□□□□□ -1.29
SF3B3-210ENST00000567654 ATG9AQ7Z3C6 839 aa7□□□□□ -1.29
SF3B3-210ENST00000567654 BTLAQ7Z6A9 289 aa7□□□□□ -1.29
SF3B3-210ENST00000567654 SMARCC1Q92922 1105 aaPredicted RBP7□□□□□ -1.29
SF3B3-210ENST00000567654 IFT43Q96FT9 208 aa7□□□□□ -1.29
SF3B3-210ENST00000567654 KIF2CQ99661 725 aa7□□□□□ -1.29
SF3B3-210ENST00000567654 TRAIPQ9BWF2 469 aa7□□□□□ -1.29
SF3B3-210ENST00000567654 PUS3Q9BZE2 481 aaKnown RBP7□□□□□ -1.29
SF3B3-210ENST00000567654 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7□□□□□ -1.29
SF3B3-210ENST00000567654 NDFIP2Q9NV92 336 aa7□□□□□ -1.29
SF3B3-210ENST00000567654 CDHR2Q9BYE9 1310 aa7□□□□□ -1.29
SF3B3-210ENST00000567654 CNTNAP4Q9C0A0 1308 aa7□□□□□ -1.29
SF3B3-210ENST00000567654 FAM177BA6PVY3 158 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 ERVV-1B6SEH8 477 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 TGFBR3LH3BV60 316 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 CSF1RP07333 972 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 RBM25P49756 843 aaKnown RBP6.99□□□□□ -1.29
SF3B3-210ENST00000567654 IDH3AP50213 366 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 CTBSQ01459 385 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 TYRO3Q06418 890 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 PDE4CQ08493 712 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 G3BP1Q13283 466 aaKnown RBP eCLIP6.99□□□□□ -1.291e-8■□□□□ 11.1
SF3B3-210ENST00000567654 LBRQ14739 615 aaKnown RBP6.99□□□□□ -1.29
SF3B3-210ENST00000567654 HSP90AB4PQ58FF6 505 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 SUSD4Q5VX71 490 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 FOXR1Q6PIV2 292 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 AACSQ86V21 672 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 ATCAYQ86WG3 371 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 TREML1Q86YW5 311 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 ERC1Q8IUD2 1116 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 ZBTB38Q8NAP3 1195 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-210ENST00000567654 RILPL2Q969X0 211 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 GMCL1Q96IK5 515 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 TRERF1Q96PN7 1200 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 PLA2G12BQ9BX93 195 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 DMGDHQ9UI17 866 aaKnown RBP6.99□□□□□ -1.29
SF3B3-210ENST00000567654 DBNLQ9UJU6 430 aaKnown RBP6.99□□□□□ -1.29
SF3B3-210ENST00000567654 HDAC5Q9UQL6 1122 aa6.99□□□□□ -1.29
SF3B3-210ENST00000567654 COL11A2P13942 1736 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-210ENST00000567654 QSER1Q2KHR3 1735 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 C2CD2LO14523 706 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 MICAL2O94851 1124 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 NTSR2O95665 410 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 BRD1O95696 1058 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 FGFR3P22607 806 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 MPSTP25325 297 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 CHMLP26374 656 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 GRNP28799 593 aaKnown RBP6.98□□□□□ -1.29
SF3B3-210ENST00000567654 HSP90AB3PQ58FF7 597 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 TNNI3KQ59H18 835 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 FIGNL1Q6PIW4 674 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 RAB44Q7Z6P3 723 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-210ENST00000567654 HOMEZQ8IX15 550 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 CLASRPQ8N2M8 674 aaKnown RBP6.98□□□□□ -1.29
SF3B3-210ENST00000567654 TTLL11Q8NHH1 800 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 HELQQ8TDG4 1101 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 EDC3Q96F86 508 aaKnown RBP6.98□□□□□ -1.29
SF3B3-210ENST00000567654 DBNDD2Q9BQY9 259 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 GREM2Q9H772 168 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 BRD7Q9NPI1 651 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 LRRC4BQ9NT99 713 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 ANKIB1Q9P2G1 1089 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 SRP68Q9UHB9 627 aaKnown RBP6.98□□□□□ -1.29
SF3B3-210ENST00000567654 FPGT-TNNI3KV9GXZ4 949 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 NRXN2Q9P2S2 1712 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 CCDC88AQ3V6T2 1871 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 TTC41PQ6P2S7 1318 aa6.98□□□□□ -1.29
SF3B3-210ENST00000567654 ABCC12Q96J65 1359 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms