RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 FERMT2Q96AC1 680 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 EPSTI1Q96J88 318 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 PKNOX2Q96KN3 472 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 SEPT11Q9NVA2 429 aaKnown RBP13.09□□□□□ -0.31
CDH1-210ENST00000566612 TMOD2Q9NZR1 351 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 USP21Q9UK80 565 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 SCG2P13521 617 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 INF2Q27J81 1249 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDH1-210ENST00000566612 PLCG2P16885 1265 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 CASP1P29466 404 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 PRDX5P30044 214 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 MCM6Q14566 821 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 DYNLL2Q96FJ2 89 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 FOXP1Q9H334 677 aaPredicted RBP13.09□□□□□ -0.31
CDH1-210ENST00000566612 WDHD1O75717 1129 aaPredicted RBP13.08□□□□□ -0.31
CDH1-210ENST00000566612 CYP2D6P10635 497 aa13.08□□□□□ -0.31
CDH1-210ENST00000566612 MFSD14BQ5SR56 506 aa13.08□□□□□ -0.31
CDH1-210ENST00000566612 UBR1Q8IWV7 1749 aa13.08□□□□□ -0.31
CDH1-210ENST00000566612 LUC7LQ9NQ29 371 aaKnown RBP13.08□□□□□ -0.31
CDH1-210ENST00000566612 LUC7L2Q9Y383 392 aaKnown RBP13.08□□□□□ -0.31
CDH1-210ENST00000566612 ARHGAP6O43182 974 aa13.08□□□□□ -0.32
CDH1-210ENST00000566612 NMT2O60551 498 aa13.08□□□□□ -0.32
CDH1-210ENST00000566612 EVCP57679 992 aa13.08□□□□□ -0.32
CDH1-210ENST00000566612 MECOMQ03112 1051 aa13.08□□□□□ -0.32
CDH1-210ENST00000566612 ERCC6LQ2NKX8 1250 aa13.08□□□□□ -0.32
CDH1-210ENST00000566612 RNF26Q9BY78 433 aaPredicted RBP13.08□□□□□ -0.32
CDH1-210ENST00000566612 ARPP21Q9UBL0 812 aaPredicted RBP13.08□□□□□ -0.32
CDH1-210ENST00000566612 DLG5Q8TDM6 1919 aa13.08□□□□□ -0.32
CDH1-210ENST00000566612 UBE2Q2LH0YL09 131 aa13.08□□□□□ -0.32
CDH1-210ENST00000566612 MYO1BO43795 1136 aa13.08□□□□□ -0.32
CDH1-210ENST00000566612 EIF3JO75822 258 aaKnown RBP13.08□□□□□ -0.32
CDH1-210ENST00000566612 GTF2IP78347 998 aa13.08□□□□□ -0.32
CDH1-210ENST00000566612 PDE4DQ08499 809 aa13.08□□□□□ -0.32
CDH1-210ENST00000566612 KCNF1Q9H3M0 494 aa13.08□□□□□ -0.32
CDH1-210ENST00000566612 C3P01024 1663 aa13.08□□□□□ -0.32
CDH1-210ENST00000566612 UBN2Q6ZU65 1347 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 ARID5AQ03989 594 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 PAK1Q13153 545 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 KRT79Q5XKE5 535 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 BLIDQ8IZY5 108 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 MINPP1Q9UNW1 487 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 FGFR1OPO95684 399 aaKnown RBP13.07□□□□□ -0.32
CDH1-210ENST00000566612 KRT9P35527 623 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 EYA3Q99504 573 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 FOXN1O15353 648 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 USO1O60763 962 aaKnown RBP13.07□□□□□ -0.32
CDH1-210ENST00000566612 RHOXF2BP0C7M4 288 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 CNGA4Q8IV77 575 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 RHOXF2Q9BQY4 288 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 PLA2G12BQ9BX93 195 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 ARFGAP3Q9NP61 516 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 SAMSN1Q9NSI8 373 aaKnown RBP13.07□□□□□ -0.32
CDH1-210ENST00000566612 CCDC66A2RUB6 948 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 CTAGE9A4FU28 777 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 AP5Z1O43299 807 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 TBC1D8BQ0IIM8 1120 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 FAM196AQ6ZSG2 479 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 PLA2G4DQ86XP0 818 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 FAM114A1Q8IWE2 563 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 NELFBQ8WX92 580 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 CAPZA3Q96KX2 299 aa13.07□□□□□ -0.32
CDH1-210ENST00000566612 CPDO75976 1380 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 KLRF2D3W0D1 207 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 TCP10Q12799 353 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 NAA30Q147X3 362 aaPredicted RBP13.06□□□□□ -0.32
CDH1-210ENST00000566612 NKX1-1Q15270 411 aaPredicted RBP13.06□□□□□ -0.32
CDH1-210ENST00000566612 AEBP2Q6ZN18 517 aaPredicted RBP13.06□□□□□ -0.32
CDH1-210ENST00000566612 DYMQ7RTS9 669 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 TRERF1Q96PN7 1200 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 BIN2Q9UBW5 565 aaPredicted RBP13.06□□□□□ -0.32
CDH1-210ENST00000566612 CT47A1Q5JQC4 288 aaPredicted RBP13.06□□□□□ -0.32
CDH1-210ENST00000566612 CSGALNACT2Q8N6G5 542 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 RBM17Q96I25 401 aaKnown RBP13.06□□□□□ -0.32
CDH1-210ENST00000566612 ATP8A2Q9NTI2 1148 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 MAN1B1Q9UKM7 699 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 PEAK1Q9H792 1746 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 SMCO2A6NFE2 343 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 SHC4Q6S5L8 630 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 TICAM2Q86XR7 235 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 TIGD1Q96MW7 591 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 CENPHQ9H3R5 247 aa13.06□□□□□ -0.32
CDH1-210ENST00000566612 BSDC1Q9NW68 430 aaPredicted RBP13.06□□□□□ -0.32
CDH1-210ENST00000566612 CDC25BP30305 580 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 ETF1P62495 437 aaKnown RBP13.05□□□□□ -0.32
CDH1-210ENST00000566612 IQCB1Q15051 598 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 IGDCC4Q8TDY8 1250 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 STAG1Q8WVM7 1258 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.05□□□□□ -0.32
CDH1-210ENST00000566612 HPS5Q9UPZ3 1129 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 USP17L3A6NCW0 530 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 USP17L4A6NCW7 530 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 USP27XA6NNY8 438 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 GTF2F1P35269 517 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDH1-210ENST00000566612 PLCD1P51178 756 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 RAD51AP2Q09MP3 1159 aa13.05□□□□□ -0.32
CDH1-210ENST00000566612 NONOQ15233 471 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDH1-210ENST00000566612 TBC1D9BQ66K14 1250 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms