RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 SIRPGQ9P1W8 387 aa6.91□□□□□ -1.3
CNOT1-203ENST00000562046 MSRB2Q9Y3D2 182 aa6.91□□□□□ -1.3
CNOT1-203ENST00000562046 HMX2A2RU54 273 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 CDK5R2Q13319 367 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 DDR2Q16832 855 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 PAOXQ6QHF9 649 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 FAM214BQ7L5A3 538 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 PHACTR4Q8IZ21 702 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 TMEM151AQ8N4L1 468 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 XAGE3Q8WTP9 111 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 MKL1Q969V6 931 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 VWCEQ96DN2 955 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 KCNF1Q9H3M0 494 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 PIF1Q9H611 641 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 C7orf69Q9H7B7 122 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 PRDM10Q9NQV6 1147 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 RAXQ9Y2V3 346 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 SLC12A7Q9Y666 1083 aa6.9□□□□□ -1.3
CNOT1-203ENST00000562046 EOMESO95936 686 aa6.89□□□□□ -1.31
CNOT1-203ENST00000562046 LETMD1Q6P1Q0 360 aa6.89□□□□□ -1.31
CNOT1-203ENST00000562046 PRR23CQ6ZRP0 262 aa6.89□□□□□ -1.31
CNOT1-203ENST00000562046 SHISA5Q8N114 240 aa6.89□□□□□ -1.31
CNOT1-203ENST00000562046 DUSP23Q9BVJ7 150 aa6.89□□□□□ -1.31
CNOT1-203ENST00000562046 TRIM55Q9BYV6 548 aa6.89□□□□□ -1.31
CNOT1-203ENST00000562046 ZNF214Q9UL59 606 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-203ENST00000562046 CEP131Q9UPN4 1083 aa6.89□□□□□ -1.31
CNOT1-203ENST00000562046 R3HCC1Q9Y3T6 440 aaKnown RBP6.89□□□□□ -1.31
CNOT1-203ENST00000562046 CNTNAP4Q9C0A0 1308 aa6.88□□□□□ -1.31
CNOT1-203ENST00000562046 FAM86C2PA6NEL3 165 aa6.88□□□□□ -1.31
CNOT1-203ENST00000562046 RBAK-RBAKDNI3L0D1 243 aa6.88□□□□□ -1.31
CNOT1-203ENST00000562046 LEFTY1O75610 366 aa6.88□□□□□ -1.31
CNOT1-203ENST00000562046 ADMP35318 185 aa6.88□□□□□ -1.31
CNOT1-203ENST00000562046 RASA3Q14644 834 aa6.88□□□□□ -1.31
CNOT1-203ENST00000562046 FXNQ16595 210 aa6.88□□□□□ -1.31
CNOT1-203ENST00000562046 KLHL6Q8WZ60 621 aa6.88□□□□□ -1.31
CNOT1-203ENST00000562046 SLC6A18Q96N87 628 aa6.88□□□□□ -1.31
CNOT1-203ENST00000562046 MIPEPQ99797 713 aa6.88□□□□□ -1.31
CNOT1-203ENST00000562046 PHAXQ9H814 394 aaKnown RBP6.88□□□□□ -1.31
CNOT1-203ENST00000562046 SUCOQ9UBS9 1254 aaKnown RBP6.88□□□□□ -1.31
CNOT1-203ENST00000562046 B2RBV5 119 aa6.87□□□□□ -1.31
CNOT1-203ENST00000562046 GJB6O95452 261 aa6.87□□□□□ -1.31
CNOT1-203ENST00000562046 PROCP04070 461 aa6.87□□□□□ -1.31
CNOT1-203ENST00000562046 GBP1P32455 592 aa6.87□□□□□ -1.31
CNOT1-203ENST00000562046 PMS1P54277 932 aaKnown RBP6.87□□□□□ -1.31
CNOT1-203ENST00000562046 LARP1BQ659C4 914 aaKnown RBP6.87□□□□□ -1.31
CNOT1-203ENST00000562046 C6orf15Q6UXA7 325 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-203ENST00000562046 CDH24Q86UP0 819 aa6.87□□□□□ -1.31
CNOT1-203ENST00000562046 PPFIBP1Q86W92 1011 aa6.87□□□□□ -1.31
CNOT1-203ENST00000562046 TOP6BLQ8N6T0 577 aa6.87□□□□□ -1.31
CNOT1-203ENST00000562046 CCDC113Q9H0I3 377 aa6.87□□□□□ -1.31
CNOT1-203ENST00000562046 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.87□□□□□ -1.31
CNOT1-203ENST00000562046 ZSWIM4Q9H7M6 989 aa6.87□□□□□ -1.31
CNOT1-203ENST00000562046 ST7Q9NRC1 585 aa6.87□□□□□ -1.31
CNOT1-203ENST00000562046 STOML1Q9UBI4 398 aa6.87□□□□□ -1.31
CNOT1-203ENST00000562046 PCDHB10Q9UN67 800 aa6.87□□□□□ -1.31
CNOT1-203ENST00000562046 CDK11AQ9UQ88 783 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-203ENST00000562046 C9IYK1 514 aa6.86□□□□□ -1.31
CNOT1-203ENST00000562046 K7ELQ4 463 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-203ENST00000562046 MRM1Q6IN84 353 aaKnown RBP6.86□□□□□ -1.31
CNOT1-203ENST00000562046 OGFOD3Q6PK18 319 aa6.86□□□□□ -1.31
CNOT1-203ENST00000562046 LRP10Q7Z4F1 713 aa6.86□□□□□ -1.31
CNOT1-203ENST00000562046 ZAR1Q86SH2 424 aa6.86□□□□□ -1.31
CNOT1-203ENST00000562046 FAM178BQ8IXR5 827 aa6.86□□□□□ -1.31
CNOT1-203ENST00000562046 DHRS1Q96LJ7 313 aa6.86□□□□□ -1.31
CNOT1-203ENST00000562046 KREMEN1Q96MU8 473 aa6.86□□□□□ -1.31
CNOT1-203ENST00000562046 MAPK8IP1Q9UQF2 711 aa6.86□□□□□ -1.31
CNOT1-203ENST00000562046 FAM221BA6H8Z2 402 aa6.85□□□□□ -1.31
CNOT1-203ENST00000562046 U2SURPO15042 1029 aaKnown RBP6.85□□□□□ -1.31
CNOT1-203ENST00000562046 CLEC3AO75596 197 aa6.85□□□□□ -1.31
CNOT1-203ENST00000562046 H2AFB1P0C5Y9 115 aa6.85□□□□□ -1.31
CNOT1-203ENST00000562046 H2AFB2P0C5Z0 115 aa6.85□□□□□ -1.31
CNOT1-203ENST00000562046 FAM87AP0C7U9 286 aa6.85□□□□□ -1.31
CNOT1-203ENST00000562046 BMS1Q14692 1282 aaKnown RBP6.85□□□□□ -1.31
CNOT1-203ENST00000562046 NKAPLQ5M9Q1 402 aa6.85□□□□□ -1.31
CNOT1-203ENST00000562046 NBPF12Q5TAG4 269 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-203ENST00000562046 RNF43Q68DV7 783 aa6.85□□□□□ -1.31
CNOT1-203ENST00000562046 VHLLQ6RSH7 139 aa6.85□□□□□ -1.31
CNOT1-203ENST00000562046 TBC1D32Q96NH3 1257 aa6.85□□□□□ -1.31
CNOT1-203ENST00000562046 SNTG2Q9NY99 539 aa6.85□□□□□ -1.31
CNOT1-203ENST00000562046 DDAH1O94760 285 aa6.84□□□□□ -1.31
CNOT1-203ENST00000562046 F13BP05160 661 aa6.84□□□□□ -1.31
CNOT1-203ENST00000562046 ETV3P41162 512 aa6.84□□□□□ -1.31
CNOT1-203ENST00000562046 SLC7A5Q01650 507 aa6.84□□□□□ -1.31
CNOT1-203ENST00000562046 DOC2BQ14184 412 aa6.84□□□□□ -1.31
CNOT1-203ENST00000562046 NCAPHQ15003 741 aa6.84□□□□□ -1.31
CNOT1-203ENST00000562046 NFE2L2Q16236 605 aa6.84□□□□□ -1.31
CNOT1-203ENST00000562046 RSPO4Q2I0M5 234 aaPredicted RBP6.84□□□□□ -1.31
CNOT1-203ENST00000562046 GIMAP6Q6P9H5 292 aa6.84□□□□□ -1.31
CNOT1-203ENST00000562046 NOP9Q86U38 636 aaKnown RBP6.84□□□□□ -1.31
CNOT1-203ENST00000562046 RNF141Q8WVD5 230 aa6.84□□□□□ -1.31
CNOT1-203ENST00000562046 FBXL18Q96ME1 805 aa6.84□□□□□ -1.31
CNOT1-203ENST00000562046 HEXIM2Q96MH2 286 aaKnown RBP6.84□□□□□ -1.31
CNOT1-203ENST00000562046 DEPDC7Q96QD5 511 aa6.84□□□□□ -1.31
CNOT1-203ENST00000562046 FAM170BA6NMN3 283 aa6.83□□□□□ -1.32
CNOT1-203ENST00000562046 NFIAQ12857 509 aa6.83□□□□□ -1.32
CNOT1-203ENST00000562046 RASGRF1Q13972 1273 aa6.83□□□□□ -1.32
CNOT1-203ENST00000562046 BBS9Q3SYG4 887 aa6.83□□□□□ -1.32
CNOT1-203ENST00000562046 GNPTABQ3T906 1256 aa6.83□□□□□ -1.32
CNOT1-203ENST00000562046 AXDND1Q5T1B0 1012 aaPredicted RBP6.83□□□□□ -1.32
CNOT1-203ENST00000562046 TDRD10Q5VZ19 366 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms