RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 GK5Q6ZS86 529 aa9.8□□□□□ -0.84
SMG1-204ENST00000561940 FLCNQ8NFG4 579 aa9.8□□□□□ -0.84
SMG1-204ENST00000561940 DHX38Q92620 1227 aaKnown RBP9.8□□□□□ -0.84
SMG1-204ENST00000561940 OAS3Q9Y6K5 1087 aaKnown RBP9.8□□□□□ -0.84
SMG1-204ENST00000561940 ROBO2Q9HCK4 1378 aa9.79□□□□□ -0.84
SMG1-204ENST00000561940 GNAT3A8MTJ3 354 aa9.79□□□□□ -0.84
SMG1-204ENST00000561940 IGF2BP3O00425 579 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMG1-204ENST00000561940 IFI16Q16666 785 aaKnown RBP9.79□□□□□ -0.84
SMG1-204ENST00000561940 TMEM201Q5SNT2 666 aa9.79□□□□□ -0.84
SMG1-204ENST00000561940 SFRP5Q5T4F7 317 aa9.79□□□□□ -0.84
SMG1-204ENST00000561940 NFXL1Q6ZNB6 911 aa9.79□□□□□ -0.84
SMG1-204ENST00000561940 SPRED2Q7Z698 418 aa9.79□□□□□ -0.84
SMG1-204ENST00000561940 VSIG10LQ86VR7 867 aa9.79□□□□□ -0.84
SMG1-204ENST00000561940 MCF2L2Q86YR7 1114 aa9.79□□□□□ -0.84
SMG1-204ENST00000561940 TP53INP2Q8IXH6 220 aa9.79□□□□□ -0.84
SMG1-204ENST00000561940 BCL7CQ8WUZ0 217 aaPredicted RBP9.79□□□□□ -0.84
SMG1-204ENST00000561940 UBXN4Q92575 508 aa9.79□□□□□ -0.84
SMG1-204ENST00000561940 NKD1Q969G9 470 aa9.79□□□□□ -0.84
SMG1-204ENST00000561940 PRR36Q9H6K5 1346 aa9.79□□□□□ -0.84
SMG1-204ENST00000561940 PRNPP04156 253 aa9.78□□□□□ -0.84
SMG1-204ENST00000561940 FGRP09769 529 aa9.78□□□□□ -0.84
SMG1-204ENST00000561940 ATF4P18848 351 aaPredicted RBP9.78□□□□□ -0.84
SMG1-204ENST00000561940 CLCQ05315 142 aa9.78□□□□□ -0.84
SMG1-204ENST00000561940 AOC3Q16853 763 aa9.78□□□□□ -0.84
SMG1-204ENST00000561940 NKPD1Q17RQ9 610 aa9.78□□□□□ -0.84
SMG1-204ENST00000561940 RASGRP4Q8TDF6 673 aa9.78□□□□□ -0.84
SMG1-204ENST00000561940 LRRC3Q9BY71 257 aa9.78□□□□□ -0.84
SMG1-204ENST00000561940 KRTAP4-8Q9BYQ9 185 aa9.78□□□□□ -0.84
SMG1-204ENST00000561940 SLC5A6Q9Y289 635 aa9.78□□□□□ -0.84
SMG1-204ENST00000561940 YARSP54577 528 aaKnown RBP9.77□□□□□ -0.85
SMG1-204ENST00000561940 CDKAL1Q5VV42 579 aa9.77□□□□□ -0.85
SMG1-204ENST00000561940 NT5C1AQ9BXI3 368 aa9.77□□□□□ -0.85
SMG1-204ENST00000561940 MKNK2Q9HBH9 465 aa9.77□□□□□ -0.85
SMG1-204ENST00000561940 TMEM265A0A087WTH1 108 aa9.76□□□□□ -0.85
SMG1-204ENST00000561940 FAM155AB1AL88 458 aaPredicted RBP9.76□□□□□ -0.85
SMG1-204ENST00000561940 SPACA3Q8IXA5 215 aa9.76□□□□□ -0.85
SMG1-204ENST00000561940 BAHD1Q8TBE0 780 aaPredicted RBP9.76□□□□□ -0.85
SMG1-204ENST00000561940 HRASLS5Q96KN8 279 aa9.76□□□□□ -0.85
SMG1-204ENST00000561940 DNAJC2Q99543 621 aaKnown RBP9.76□□□□□ -0.85
SMG1-204ENST00000561940 GINM1Q9NU53 330 aa9.76□□□□□ -0.85
SMG1-204ENST00000561940 CEP131Q9UPN4 1083 aa9.76□□□□□ -0.85
SMG1-204ENST00000561940 MAPK8IP1Q9UQF2 711 aa9.76□□□□□ -0.85
SMG1-204ENST00000561940 CD8BP10966 210 aa9.75□□□□□ -0.85
SMG1-204ENST00000561940 ATP2B1P20020 1258 aa9.75□□□□□ -0.85
SMG1-204ENST00000561940 GTF2F1P35269 517 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMG1-204ENST00000561940 ARSHQ5FYA8 562 aa9.75□□□□□ -0.85
SMG1-204ENST00000561940 PHACTR4Q8IZ21 702 aa9.75□□□□□ -0.85
SMG1-204ENST00000561940 DNAJB8Q8NHS0 232 aa9.75□□□□□ -0.85
SMG1-204ENST00000561940 PPP1R13LQ8WUF5 828 aa9.75□□□□□ -0.85
SMG1-204ENST00000561940 KIF2CQ99661 725 aa9.75□□□□□ -0.85
SMG1-204ENST00000561940 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.75□□□□□ -0.855e-9■■■■□ 23.9
SMG1-204ENST00000561940 ANTXR1Q9H6X2 564 aa9.75□□□□□ -0.85
SMG1-204ENST00000561940 PAK6Q9NQU5 681 aaPredicted RBP9.75□□□□□ -0.85
SMG1-204ENST00000561940 EFR3BQ9Y2G0 817 aa9.75□□□□□ -0.85
SMG1-204ENST00000561940 SLC22A31A6NKX4 558 aa9.74□□□□□ -0.85
SMG1-204ENST00000561940 NASPP49321 788 aaPredicted RBP9.74□□□□□ -0.85
SMG1-204ENST00000561940 PRKCQQ04759 706 aa9.74□□□□□ -0.85
SMG1-204ENST00000561940 ZNF746Q6NUN9 644 aaPredicted RBP9.74□□□□□ -0.85
SMG1-204ENST00000561940 VPS37DQ86XT2 251 aa9.74□□□□□ -0.85
SMG1-204ENST00000561940 ABI1Q8IZP0 508 aa9.74□□□□□ -0.85
SMG1-204ENST00000561940 CYB5D2Q8WUJ1 264 aa9.74□□□□□ -0.85
SMG1-204ENST00000561940 HSPA12BQ96MM6 686 aa9.74□□□□□ -0.85
SMG1-204ENST00000561940 TNKS2Q9H2K2 1166 aa9.74□□□□□ -0.85
SMG1-204ENST00000561940 VAV3Q9UKW4 847 aa9.74□□□□□ -0.85
SMG1-204ENST00000561940 CYP7A1P22680 504 aa9.73□□□□□ -0.85
SMG1-204ENST00000561940 ZNF165P49910 485 aa9.73□□□□□ -0.85
SMG1-204ENST00000561940 MLECQ14165 292 aa9.73□□□□□ -0.85
SMG1-204ENST00000561940 SLITRK4Q8IW52 837 aa9.73□□□□□ -0.85
SMG1-204ENST00000561940 SLFN12Q8IYM2 578 aa9.73□□□□□ -0.85
SMG1-204ENST00000561940 STK11IPQ8N1F8 1099 aa9.73□□□□□ -0.85
SMG1-204ENST00000561940 MFSD4AQ8N468 514 aa9.73□□□□□ -0.85
SMG1-204ENST00000561940 CCDC74BQ96LY2 380 aa9.73□□□□□ -0.85
SMG1-204ENST00000561940 FBXL18Q96ME1 805 aa9.73□□□□□ -0.85
SMG1-204ENST00000561940 H3BS24 57 aa9.72□□□□□ -0.85
SMG1-204ENST00000561940 LRRN2O75325 713 aa9.72□□□□□ -0.85
SMG1-204ENST00000561940 GBP1P32455 592 aa9.72□□□□□ -0.85
SMG1-204ENST00000561940 ETV3P41162 512 aa9.72□□□□□ -0.85
SMG1-204ENST00000561940 WFDC3Q8IUB2 231 aa9.72□□□□□ -0.85
SMG1-204ENST00000561940 MISP3Q96FF7 219 aa9.72□□□□□ -0.85
SMG1-204ENST00000561940 EHMT1Q9H9B1 1298 aa9.72□□□□□ -0.85
SMG1-204ENST00000561940 CAPN6Q9Y6Q1 641 aa9.72□□□□□ -0.85
SMG1-204ENST00000561940 ATE1O95260 518 aa9.71□□□□□ -0.86
SMG1-204ENST00000561940 TNK2Q07912 1038 aa9.71□□□□□ -0.86
SMG1-204ENST00000561940 SNX11Q9Y5W9 270 aa9.71□□□□□ -0.86
SMG1-204ENST00000561940 ZNF865P0CJ78 1059 aaPredicted RBP9.7□□□□□ -0.86
SMG1-204ENST00000561940 RAG1P15918 1043 aa9.7□□□□□ -0.86
SMG1-204ENST00000561940 POLR2BP30876 1174 aaKnown RBP9.7□□□□□ -0.86
SMG1-204ENST00000561940 PLCL1Q15111 1095 aa9.7□□□□□ -0.86
SMG1-204ENST00000561940 FBXW10Q5XX13 1052 aa9.7□□□□□ -0.86
SMG1-204ENST00000561940 OVOS1Q6IE37 1185 aa9.7□□□□□ -0.86
SMG1-204ENST00000561940 SEC16BQ96JE7 1060 aa9.7□□□□□ -0.86
SMG1-204ENST00000561940 Q96M66 194 aa9.7□□□□□ -0.86
SMG1-204ENST00000561940 GMIPQ9P107 970 aa9.7□□□□□ -0.86
SMG1-204ENST00000561940 ZSWIM5Q9P217 1185 aa9.7□□□□□ -0.86
SMG1-204ENST00000561940 WASH4PA8MWX3 477 aa9.69□□□□□ -0.86
SMG1-204ENST00000561940 SOX9P48436 509 aa9.69□□□□□ -0.86
SMG1-204ENST00000561940 IKZF1Q13422 519 aa9.69□□□□□ -0.86
SMG1-204ENST00000561940 CCDC81Q6ZN84 652 aa9.69□□□□□ -0.86
SMG1-204ENST00000561940 REXO1Q8N1G1 1221 aaKnown RBP9.69□□□□□ -0.86
SMG1-204ENST00000561940 ATP13A1Q9HD20 1204 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms