RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 SPINK2P20155 84 aa7.73□□□□□ -1.17
USP8-218ENST00000561330 FBXW10Q5XX13 1052 aa7.73□□□□□ -1.17
USP8-218ENST00000561330 BSDC1Q9NW68 430 aaPredicted RBP7.73□□□□□ -1.17
USP8-218ENST00000561330 ZNRF3Q9ULT6 936 aa7.73□□□□□ -1.17
USP8-218ENST00000561330 PPT2Q9UMR5 302 aa7.73□□□□□ -1.17
USP8-218ENST00000561330 U3KQE9 123 aa7.73□□□□□ -1.17
USP8-218ENST00000561330 CEACAM5P06731 702 aa7.72□□□□□ -1.17
USP8-218ENST00000561330 CHMP4BP1P59074 171 aa7.72□□□□□ -1.17
USP8-218ENST00000561330 CDCP2Q5VXM1 449 aa7.72□□□□□ -1.17
USP8-218ENST00000561330 OVOS1Q6IE37 1185 aa7.72□□□□□ -1.17
USP8-218ENST00000561330 PLD6Q8N2A8 252 aaKnown RBP7.72□□□□□ -1.17
USP8-218ENST00000561330 BAHD1Q8TBE0 780 aaPredicted RBP7.72□□□□□ -1.17
USP8-218ENST00000561330 PPP1R13LQ8WUF5 828 aa7.72□□□□□ -1.17
USP8-218ENST00000561330 TMEM40Q8WWA1 233 aa7.72□□□□□ -1.17
USP8-218ENST00000561330 COX4I2Q96KJ9 171 aa7.72□□□□□ -1.17
USP8-218ENST00000561330 KIF2CQ99661 725 aa7.72□□□□□ -1.17
USP8-218ENST00000561330 ANTXR1Q9H6X2 564 aa7.72□□□□□ -1.17
USP8-218ENST00000561330 CNTNAP4Q9C0A0 1308 aa7.72□□□□□ -1.17
USP8-218ENST00000561330 FAM155AB1AL88 458 aaPredicted RBP7.71□□□□□ -1.18
USP8-218ENST00000561330 CBX7O95931 251 aa7.71□□□□□ -1.18
USP8-218ENST00000561330 GBP1P32455 592 aa7.71□□□□□ -1.18
USP8-218ENST00000561330 SOX9P48436 509 aa7.71□□□□□ -1.18
USP8-218ENST00000561330 GNL2Q13823 731 aaKnown RBP7.71□□□□□ -1.18
USP8-218ENST00000561330 IFI16Q16666 785 aaKnown RBP7.71□□□□□ -1.18
USP8-218ENST00000561330 C22orf34Q6ZV56 151 aa7.71□□□□□ -1.18
USP8-218ENST00000561330 NLRC3Q7RTR2 1065 aa7.71□□□□□ -1.18
USP8-218ENST00000561330 Q8N3U1 123 aa7.71□□□□□ -1.18
USP8-218ENST00000561330 ATG4CQ96DT6 458 aa7.71□□□□□ -1.18
USP8-218ENST00000561330 CNNM2Q9H8M5 875 aa7.71□□□□□ -1.18
USP8-218ENST00000561330 TMEM265A0A087WTH1 108 aa7.7□□□□□ -1.18
USP8-218ENST00000561330 MEIS3P2A8K0S8 358 aa7.7□□□□□ -1.18
USP8-218ENST00000561330 RGS13O14921 159 aa7.7□□□□□ -1.18
USP8-218ENST00000561330 PRNPP04156 253 aa7.7□□□□□ -1.18
USP8-218ENST00000561330 NASPP49321 788 aaPredicted RBP7.7□□□□□ -1.18
USP8-218ENST00000561330 VPS37DQ86XT2 251 aa7.7□□□□□ -1.18
USP8-218ENST00000561330 MFSD4AQ8N468 514 aa7.7□□□□□ -1.18
USP8-218ENST00000561330 SEC16BQ96JE7 1060 aa7.7□□□□□ -1.18
USP8-218ENST00000561330 CRBNQ96SW2 442 aa7.7□□□□□ -1.18
USP8-218ENST00000561330 CAPN10Q9HC96 672 aa7.7□□□□□ -1.18
USP8-218ENST00000561330 PLAGL2Q9UPG8 496 aa7.7□□□□□ -1.18
USP8-218ENST00000561330 PRR33A8MZF0 331 aa7.69□□□□□ -1.18
USP8-218ENST00000561330 ZNF865P0CJ78 1059 aaPredicted RBP7.69□□□□□ -1.18
USP8-218ENST00000561330 NME1P15531 152 aaKnown RBP7.69□□□□□ -1.18
USP8-218ENST00000561330 KIR3DL1P43629 444 aa7.69□□□□□ -1.18
USP8-218ENST00000561330 NKPD1Q17RQ9 610 aa7.69□□□□□ -1.18
USP8-218ENST00000561330 CCDC81Q6ZN84 652 aa7.69□□□□□ -1.18
USP8-218ENST00000561330 VSIG10LQ86VR7 867 aa7.69□□□□□ -1.18
USP8-218ENST00000561330 STK11IPQ8N1F8 1099 aa7.69□□□□□ -1.18
USP8-218ENST00000561330 MISP3Q96FF7 219 aa7.69□□□□□ -1.18
USP8-218ENST00000561330 TNKS2Q9H2K2 1166 aa7.69□□□□□ -1.18
USP8-218ENST00000561330 ANGEL1Q9UNK9 670 aaKnown RBP7.69□□□□□ -1.18
USP8-218ENST00000561330 WNT11O96014 354 aa7.68□□□□□ -1.18
USP8-218ENST00000561330 SPACA3Q8IXA5 215 aa7.68□□□□□ -1.18
USP8-218ENST00000561330 RBBP8NLQ8NC74 664 aaPredicted RBP7.68□□□□□ -1.18
USP8-218ENST00000561330 CPLX3Q8WVH0 158 aa7.68□□□□□ -1.18
USP8-218ENST00000561330 HRASLS5Q96KN8 279 aa7.68□□□□□ -1.18
USP8-218ENST00000561330 KREMEN1Q96MU8 473 aa7.68□□□□□ -1.18
USP8-218ENST00000561330 CCDC39Q9UFE4 941 aa7.68□□□□□ -1.18
USP8-218ENST00000561330 VAV3Q9UKW4 847 aa7.68□□□□□ -1.18
USP8-218ENST00000561330 SNX11Q9Y5W9 270 aa7.68□□□□□ -1.18
USP8-218ENST00000561330 CAPN6Q9Y6Q1 641 aa7.68□□□□□ -1.18
USP8-218ENST00000561330 TNFRSF10CO14798 259 aa7.67□□□□□ -1.18
USP8-218ENST00000561330 UBOX5O94941 541 aa7.67□□□□□ -1.18
USP8-218ENST00000561330 POLR2BP30876 1174 aaKnown RBP7.67□□□□□ -1.18
USP8-218ENST00000561330 CCNFP41002 786 aa7.67□□□□□ -1.18
USP8-218ENST00000561330 CLCN7P51798 805 aa7.67□□□□□ -1.18
USP8-218ENST00000561330 EIF6P56537 245 aaKnown RBP7.67□□□□□ -1.18
USP8-218ENST00000561330 PRKCQQ04759 706 aa7.67□□□□□ -1.18
USP8-218ENST00000561330 XP32Q5T750 250 aa7.67□□□□□ -1.18
USP8-218ENST00000561330 RNF141Q8WVD5 230 aa7.67□□□□□ -1.18
USP8-218ENST00000561330 TM9SF2Q99805 663 aa7.67□□□□□ -1.18
USP8-218ENST00000561330 SRRTQ9BXP5 876 aaKnown RBP7.67□□□□□ -1.18
USP8-218ENST00000561330 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.67□□□□□ -1.18
USP8-218ENST00000561330 SLC5A6Q9Y289 635 aa7.67□□□□□ -1.18
USP8-218ENST00000561330 ATF4P18848 351 aaPredicted RBP7.66□□□□□ -1.18
USP8-218ENST00000561330 AOC3Q16853 763 aa7.66□□□□□ -1.18
USP8-218ENST00000561330 CDKAL1Q5VV42 579 aa7.66□□□□□ -1.18
USP8-218ENST00000561330 INTS3Q68E01 1043 aaKnown RBP7.66□□□□□ -1.18
USP8-218ENST00000561330 NBPF11Q86T75 865 aa7.66□□□□□ -1.18
USP8-218ENST00000561330 PIWIL2Q8TC59 973 aaKnown RBP7.66□□□□□ -1.18
USP8-218ENST00000561330 BCL7CQ8WUZ0 217 aaPredicted RBP7.66□□□□□ -1.18
USP8-218ENST00000561330 SLC9A7Q96T83 725 aa7.66□□□□□ -1.18
USP8-218ENST00000561330 ASPNQ9BXN1 380 aa7.66□□□□□ -1.18
USP8-218ENST00000561330 KCNH3Q9ULD8 1083 aa7.66□□□□□ -1.18
USP8-218ENST00000561330 ADAMTS4O75173 837 aa7.65□□□□□ -1.18
USP8-218ENST00000561330 TNK2Q07912 1038 aa7.65□□□□□ -1.18
USP8-218ENST00000561330 BNIP3Q12983 259 aa7.65□□□□□ -1.18
USP8-218ENST00000561330 LSRQ86X29 649 aaPredicted RBP7.65□□□□□ -1.18
USP8-218ENST00000561330 FLCNQ8NFG4 579 aa7.65□□□□□ -1.18
USP8-218ENST00000561330 OR6P1Q8NGX9 317 aa7.65□□□□□ -1.18
USP8-218ENST00000561330 FBXL18Q96ME1 805 aa7.65□□□□□ -1.18
USP8-218ENST00000561330 HSPA12BQ96MM6 686 aa7.65□□□□□ -1.18
USP8-218ENST00000561330 TINF2Q9BSI4 451 aa7.65□□□□□ -1.18
USP8-218ENST00000561330 STRIP2Q9ULQ0 834 aa7.65□□□□□ -1.18
USP8-218ENST00000561330 COL17A1Q9UMD9 1497 aaPredicted RBP7.65□□□□□ -1.18
USP8-218ENST00000561330 CLEC3AO75596 197 aa7.64□□□□□ -1.19
USP8-218ENST00000561330 GIPRP48546 466 aa7.64□□□□□ -1.19
USP8-218ENST00000561330 RNF4P78317 190 aa7.64□□□□□ -1.19
USP8-218ENST00000561330 TAB3Q8N5C8 712 aaPredicted RBP7.64□□□□□ -1.19
USP8-218ENST00000561330 ASB11Q8WXH4 323 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms