RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SMARCC2Q8TAQ2 1214 aa12.01□□□□□ -0.49
USP3-219ENST00000561326 IL17RBQ9NRM6 502 aa12.01□□□□□ -0.49
USP3-219ENST00000561326 ADARB2Q9NS39 739 aaKnown RBP12.01□□□□□ -0.49
USP3-219ENST00000561326 HACL1Q9UJ83 578 aa12.01□□□□□ -0.49
USP3-219ENST00000561326 SCN4AP35499 1836 aa12□□□□□ -0.49
USP3-219ENST00000561326 STX6O43752 255 aa12□□□□□ -0.49
USP3-219ENST00000561326 TTLL1O95922 423 aa12□□□□□ -0.49
USP3-219ENST00000561326 SYT1P21579 422 aa12□□□□□ -0.49
USP3-219ENST00000561326 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
USP3-219ENST00000561326 EPS15P42566 896 aa12□□□□□ -0.49
USP3-219ENST00000561326 GNAQP50148 359 aa12□□□□□ -0.49
USP3-219ENST00000561326 AKAP17AQ02040 695 aaKnown RBP12□□□□□ -0.49
USP3-219ENST00000561326 SSRP1Q08945 709 aaKnown RBP12□□□□□ -0.49
USP3-219ENST00000561326 ST3GAL1Q11201 340 aa12□□□□□ -0.49
USP3-219ENST00000561326 ABCB5Q2M3G0 1257 aa12□□□□□ -0.49
USP3-219ENST00000561326 RCSD1Q6JBY9 416 aa12□□□□□ -0.49
USP3-219ENST00000561326 TMEM179Q6ZVK1 233 aa12□□□□□ -0.49
USP3-219ENST00000561326 PNMA1Q8ND90 353 aa12□□□□□ -0.49
USP3-219ENST00000561326 WASF1Q92558 559 aa12□□□□□ -0.49
USP3-219ENST00000561326 DDX11Q96FC9 970 aa12□□□□□ -0.49
USP3-219ENST00000561326 TMEM39BQ9GZU3 492 aa12□□□□□ -0.49
USP3-219ENST00000561326 KANSL2Q9H9L4 492 aa12□□□□□ -0.49
USP3-219ENST00000561326 MTMR4Q9NYA4 1195 aa12□□□□□ -0.49
USP3-219ENST00000561326 ORC3Q9UBD5 711 aaPredicted RBP12□□□□□ -0.49
USP3-219ENST00000561326 ATP6V1DQ9Y5K8 247 aa12□□□□□ -0.49
USP3-219ENST00000561326 CNTNAP1P78357 1384 aa12□□□□□ -0.49
USP3-219ENST00000561326 PLIN4Q96Q06 1357 aa12□□□□□ -0.49
USP3-219ENST00000561326 GREB1LQ9C091 1923 aaPredicted RBP11.99□□□□□ -0.49
USP3-219ENST00000561326 PTPDC1A2A3K4 754 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 H3BQV1 296 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 JAK2O60674 1132 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 CTDNEP1O95476 244 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 EGFRP00533 1210 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 AKR1B1P15121 316 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 IFNAR1P17181 557 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 TROAPQ12815 778 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 IFFO2Q5TF58 517 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 RAB11FIP4Q86YS3 637 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 CCDC144CPQ8IYA2 1237 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 RGS22Q8NE09 1264 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 CEP95Q96GE4 821 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 GBP4Q96PP9 640 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 TMEM47Q9BQJ4 181 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 MYL10Q9BUA6 226 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 DEFB129Q9H1M3 183 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 CLIP2Q9UDT6 1046 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 PPP2R3BQ9Y5P8 575 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 NID2Q14112 1375 aa11.99□□□□□ -0.49
USP3-219ENST00000561326 PITPNM2Q9BZ72 1349 aa11.98□□□□□ -0.49
USP3-219ENST00000561326 IGKV6D-41A0A0C4DH26 115 aa11.98□□□□□ -0.49
USP3-219ENST00000561326 GLTPD2A6NH11 291 aa11.98□□□□□ -0.49
USP3-219ENST00000561326 RXRAP19793 462 aa11.98□□□□□ -0.49
USP3-219ENST00000561326 CDC27P30260 824 aa11.98□□□□□ -0.49
USP3-219ENST00000561326 NOVP48745 357 aa11.98□□□□□ -0.49
USP3-219ENST00000561326 MAP3K10Q02779 954 aa11.98□□□□□ -0.49
USP3-219ENST00000561326 ANGEL2Q5VTE6 544 aaKnown RBP11.98□□□□□ -0.49
USP3-219ENST00000561326 DCAF15Q66K64 600 aa11.98□□□□□ -0.49
USP3-219ENST00000561326 DCPSQ96C86 337 aaKnown RBP11.98□□□□□ -0.49
USP3-219ENST00000561326 L3MBTL3Q96JM7 780 aaPredicted RBP11.98□□□□□ -0.49
USP3-219ENST00000561326 LZTS2Q9BRK4 669 aa11.98□□□□□ -0.49
USP3-219ENST00000561326 GINM1Q9NU53 330 aa11.98□□□□□ -0.49
USP3-219ENST00000561326 NYAP2Q9P242 653 aa11.98□□□□□ -0.49
USP3-219ENST00000561326 ATAD5Q96QE3 1844 aa11.97□□□□□ -0.49
USP3-219ENST00000561326 VPS37CA5D8V6 355 aaPredicted RBP11.97□□□□□ -0.49
USP3-219ENST00000561326 IQCA1LA6NCM1 817 aa11.97□□□□□ -0.49
USP3-219ENST00000561326 FAM196BA6NMK8 535 aa11.97□□□□□ -0.49
USP3-219ENST00000561326 GOLGA6L22H0YM25 854 aa11.97□□□□□ -0.49
USP3-219ENST00000561326 BRD1O95696 1058 aa11.97□□□□□ -0.49
USP3-219ENST00000561326 ZSCAN22P10073 491 aaPredicted RBP11.97□□□□□ -0.49
USP3-219ENST00000561326 ATP2B2Q01814 1243 aa11.97□□□□□ -0.49
USP3-219ENST00000561326 TRIM29Q14134 588 aa11.97□□□□□ -0.49
USP3-219ENST00000561326 SUPT20HL1Q3ZLR7 823 aa11.97□□□□□ -0.49
USP3-219ENST00000561326 USP50Q70EL3 339 aaPredicted RBP11.97□□□□□ -0.49
USP3-219ENST00000561326 TNPO1Q92973 898 aaKnown RBP11.97□□□□□ -0.49
USP3-219ENST00000561326 MKL1Q969V6 931 aa11.97□□□□□ -0.49
USP3-219ENST00000561326 SLC26A6Q9BXS9 759 aa11.97□□□□□ -0.49
USP3-219ENST00000561326 DNAJC18Q9H819 358 aa11.97□□□□□ -0.49
USP3-219ENST00000561326 FAM217BQ9NTX9 383 aaPredicted RBP11.97□□□□□ -0.49
USP3-219ENST00000561326 RBM27Q9P2N5 1060 aaKnown RBP11.97□□□□□ -0.49
USP3-219ENST00000561326 STK36Q9NRP7 1315 aa11.96□□□□□ -0.49
USP3-219ENST00000561326 FMNL1O95466 1100 aaPredicted RBP11.96□□□□□ -0.49
USP3-219ENST00000561326 PARP1P09874 1014 aaKnown RBP11.96□□□□□ -0.49
USP3-219ENST00000561326 XBP1P17861 261 aa11.96□□□□□ -0.49
USP3-219ENST00000561326 SMARCA1P28370 1054 aa11.96□□□□□ -0.49
USP3-219ENST00000561326 GRM4Q14833 912 aa11.96□□□□□ -0.49
USP3-219ENST00000561326 NTRK3Q16288 839 aa11.96□□□□□ -0.49
USP3-219ENST00000561326 MIGA2Q7L4E1 593 aa11.96□□□□□ -0.49
USP3-219ENST00000561326 TRPM4Q8TD43 1214 aa11.96□□□□□ -0.49
USP3-219ENST00000561326 ZC3H15Q8WU90 426 aaKnown RBP11.96□□□□□ -0.49
USP3-219ENST00000561326 C8orf76Q96K31 380 aa11.96□□□□□ -0.49
USP3-219ENST00000561326 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.96□□□□□ -0.49
USP3-219ENST00000561326 RNF26Q9BY78 433 aaPredicted RBP11.96□□□□□ -0.49
USP3-219ENST00000561326 GGA3Q9NZ52 723 aa11.96□□□□□ -0.49
USP3-219ENST00000561326 PGAP2Q9UHJ9 254 aa11.96□□□□□ -0.49
USP3-219ENST00000561326 SYNPO2Q9UMS6 1093 aa11.96□□□□□ -0.49
USP3-219ENST00000561326 PRPF3O43395 683 aaKnown RBP11.95□□□□□ -0.5
USP3-219ENST00000561326 GDF11O95390 407 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 DEXIO95424 95 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 GH2P01242 217 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 ASNSP08243 561 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms