RNA–Protein interactions for RNA: ENST00000561078.5

SPG21-213, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 1,520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-213ENST00000561078 RASEFQ8IZ41 740 aa17.67■□□□□ 0.42
SPG21-213ENST00000561078 KCNB2Q92953 911 aa17.67■□□□□ 0.42
SPG21-213ENST00000561078 CTNNA3Q9UI47 895 aa17.67■□□□□ 0.42
SPG21-213ENST00000561078 C19orf81C9J6K1 198 aa17.67■□□□□ 0.42
SPG21-213ENST00000561078 POLR3DP05423 398 aaPredicted RBP17.67■□□□□ 0.42
SPG21-213ENST00000561078 PSMA5P28066 241 aa17.67■□□□□ 0.42
SPG21-213ENST00000561078 PRMT2P55345 433 aa17.67■□□□□ 0.42
SPG21-213ENST00000561078 PABPC4Q13310 644 aaKnown RBP eCLIP17.67■□□□□ 0.427e-8■■■■■ 27
SPG21-213ENST00000561078 GADL1Q6ZQY3 521 aa17.67■□□□□ 0.42
SPG21-213ENST00000561078 LCORLQ8N3X6 602 aa17.67■□□□□ 0.42
SPG21-213ENST00000561078 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
SPG21-213ENST00000561078 DCP1AQ9NPI6 582 aaPredicted RBP17.67■□□□□ 0.42
SPG21-213ENST00000561078 CDK5RAP2Q96SN8 1893 aa17.66■□□□□ 0.42
SPG21-213ENST00000561078 CASTP20810 708 aaKnown RBP17.66■□□□□ 0.42
SPG21-213ENST00000561078 BACE1P56817 501 aa17.66■□□□□ 0.42
SPG21-213ENST00000561078 VPS53Q5VIR6 699 aa17.66■□□□□ 0.42
SPG21-213ENST00000561078 UPF3BQ9BZI7 483 aaKnown RBP17.66■□□□□ 0.42
SPG21-213ENST00000561078 MCM9Q9NXL9 1143 aa17.66■□□□□ 0.42
SPG21-213ENST00000561078 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.66■□□□□ 0.42
SPG21-213ENST00000561078 PNMA3Q9UL41 463 aa17.66■□□□□ 0.42
SPG21-213ENST00000561078 ZBTB21Q9ULJ3 1066 aa17.66■□□□□ 0.42
SPG21-213ENST00000561078 SIPA1L1O43166 1804 aa17.65■□□□□ 0.42
SPG21-213ENST00000561078 CD2BP2O95400 341 aaKnown RBP17.65■□□□□ 0.42
SPG21-213ENST00000561078 BCRP11274 1271 aa17.65■□□□□ 0.42
SPG21-213ENST00000561078 PLCD1P51178 756 aa17.65■□□□□ 0.42
SPG21-213ENST00000561078 GABPAQ06546 454 aa17.65■□□□□ 0.42
SPG21-213ENST00000561078 CCDC84Q86UT8 332 aaPredicted RBP17.65■□□□□ 0.42
SPG21-213ENST00000561078 TM6SF1Q9BZW5 370 aa17.65■□□□□ 0.42
SPG21-213ENST00000561078 ARMT1Q9H993 441 aa17.65■□□□□ 0.42
SPG21-213ENST00000561078 CPA4Q9UI42 421 aa17.65■□□□□ 0.42
SPG21-213ENST00000561078 CYP46A1Q9Y6A2 500 aa17.65■□□□□ 0.42
SPG21-213ENST00000561078 PHIPQ8WWQ0 1821 aa17.65■□□□□ 0.42
SPG21-213ENST00000561078 USP17L10C9JJH3 530 aa17.64■□□□□ 0.41
SPG21-213ENST00000561078 MBD4O95243 580 aa17.64■□□□□ 0.41
SPG21-213ENST00000561078 APPP05067 770 aa17.64■□□□□ 0.41
SPG21-213ENST00000561078 CYP2C8P10632 490 aa17.64■□□□□ 0.41
SPG21-213ENST00000561078 JAG1P78504 1218 aa17.64■□□□□ 0.41
SPG21-213ENST00000561078 CERKLQ49MI3 558 aaPredicted RBP17.64■□□□□ 0.41
SPG21-213ENST00000561078 LAMA4Q16363 1823 aa17.64■□□□□ 0.41
SPG21-213ENST00000561078 GNAT2P19087 354 aa17.63■□□□□ 0.41
SPG21-213ENST00000561078 HOXD10P28358 340 aa17.63■□□□□ 0.41
SPG21-213ENST00000561078 HMGCS2P54868 508 aa17.63■□□□□ 0.41
SPG21-213ENST00000561078 CAP1Q01518 475 aa17.63■□□□□ 0.41
SPG21-213ENST00000561078 TSGA10IPQ3SY00 556 aa17.63■□□□□ 0.41
SPG21-213ENST00000561078 SPRYD3Q8NCJ5 442 aa17.63■□□□□ 0.41
SPG21-213ENST00000561078 SDR42E1Q8WUS8 393 aa17.63■□□□□ 0.41
SPG21-213ENST00000561078 CABP5Q9NP86 173 aa17.63■□□□□ 0.41
SPG21-213ENST00000561078 SWAP70Q9UH65 585 aa17.63■□□□□ 0.41
SPG21-213ENST00000561078 GDF11O95390 407 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 GH2P01242 217 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 HOXA7P31268 230 aaPredicted RBP17.62■□□□□ 0.41
SPG21-213ENST00000561078 SHMT1P34896 483 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 GCLCP48506 637 aaPredicted RBP17.62■□□□□ 0.41
SPG21-213ENST00000561078 IMMTQ16891 758 aaKnown RBP17.62■□□□□ 0.41
SPG21-213ENST00000561078 BLOC1S2Q6QNY1 142 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 AMOTL1Q8IY63 956 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 SMCR8Q8TEV9 937 aaPredicted RBP17.62■□□□□ 0.41
SPG21-213ENST00000561078 ARMC5Q96C12 935 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 TMOD4Q9NZQ9 345 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 CYP21A2P08686 494 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 OSBPP22059 807 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 PSMC4P43686 418 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 MTMR2Q13614 643 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 ABCB5Q2M3G0 1257 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 SLC4A8Q2Y0W8 1093 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 ADCK5Q3MIX3 580 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 TREML2Q5T2D2 321 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 GIMAP6Q6P9H5 292 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 NBPF11Q86T75 865 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 STRBPQ96SI9 672 aaKnown RBP17.62■□□□□ 0.41
SPG21-213ENST00000561078 SLKQ9H2G2 1235 aaPredicted RBP17.62■□□□□ 0.41
SPG21-213ENST00000561078 ZSWIM6Q9HCJ5 1215 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 MYH1P12882 1939 aa17.62■□□□□ 0.41
SPG21-213ENST00000561078 MLLT1Q03111 559 aaPredicted RBP17.61■□□□□ 0.41
SPG21-213ENST00000561078 RUFY3Q7L099 469 aa17.61■□□□□ 0.41
SPG21-213ENST00000561078 NACAP1Q9BZK3 213 aa17.61■□□□□ 0.41
SPG21-213ENST00000561078 PDRG1Q9NUG6 133 aa17.61■□□□□ 0.41
SPG21-213ENST00000561078 SLC4A4Q9Y6R1 1079 aa17.61■□□□□ 0.41
SPG21-213ENST00000561078 PRKAB2O43741 272 aa17.6■□□□□ 0.41
SPG21-213ENST00000561078 FGAP02671 866 aa17.6■□□□□ 0.41
SPG21-213ENST00000561078 USP14P54578 494 aa17.6■□□□□ 0.41
SPG21-213ENST00000561078 FCGRTP55899 365 aa17.6■□□□□ 0.41
SPG21-213ENST00000561078 C12orf60Q5U649 245 aa17.6■□□□□ 0.41
SPG21-213ENST00000561078 C12orf42Q96LP6 360 aa17.6■□□□□ 0.41
SPG21-213ENST00000561078 NEK1Q96PY6 1258 aa17.6■□□□□ 0.41
SPG21-213ENST00000561078 ARHGAP39Q9C0H5 1083 aa17.6■□□□□ 0.41
SPG21-213ENST00000561078 SRRDQ9UH36 339 aa17.6■□□□□ 0.41
SPG21-213ENST00000561078 PTPRFP10586 1907 aa17.6■□□□□ 0.41
SPG21-213ENST00000561078 DDX60LQ5H9U9 1706 aaKnown RBP17.59■□□□□ 0.41
SPG21-213ENST00000561078 ATAD5Q96QE3 1844 aa17.59■□□□□ 0.41
SPG21-213ENST00000561078 PATL2C9JE40 543 aaKnown RBP17.59■□□□□ 0.41
SPG21-213ENST00000561078 ZNF213O14771 459 aa17.59■□□□□ 0.41
SPG21-213ENST00000561078 FMNL1O95466 1100 aaPredicted RBP17.59■□□□□ 0.41
SPG21-213ENST00000561078 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
SPG21-213ENST00000561078 FAM110CQ1W6H9 321 aa17.59■□□□□ 0.41
SPG21-213ENST00000561078 USP17L2Q6R6M4 530 aa17.59■□□□□ 0.41
SPG21-213ENST00000561078 NOL8Q76FK4 1167 aaKnown RBP17.59■□□□□ 0.41
SPG21-213ENST00000561078 TRIM47Q96LD4 638 aa17.59■□□□□ 0.41
SPG21-213ENST00000561078 CCDC17Q96LX7 622 aa17.59■□□□□ 0.41
SPG21-213ENST00000561078 KIAA1683Q9H0B3 1180 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms