RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 ADD1P35611 737 aaKnown RBP13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 EVX2Q03828 476 aa13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 TRIM29Q14134 588 aa13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 NTRK3Q16288 839 aa13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 SLC4A8Q2Y0W8 1093 aa13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 ATL3Q6DD88 541 aa13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 RCSD1Q6JBY9 416 aa13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 FAM177A1Q8N128 213 aaPredicted RBP13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 PNMA1Q8ND90 353 aa13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 C8orf76Q96K31 380 aa13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 IL17RBQ9NRM6 502 aa13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 FAM217BQ9NTX9 383 aaPredicted RBP13.76□□□□□ -0.21
AC087878.1-201ENST00000560709 ZC3H4Q9UPT8 1303 aaKnown RBP13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 IGKV6D-41A0A0C4DH26 115 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 H7C1D1 291 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 WNT10BO00744 389 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 TBC1D12O60347 775 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 TTLL1O95922 423 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 SHMT1P34896 483 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 GMPSP49915 693 aaPredicted RBP13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 TCP10Q12799 353 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 TATDN1Q6P1N9 297 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 TMTC3Q6ZXV5 915 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 MICALL2Q8IY33 904 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 HOOK2Q96ED9 719 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 CSRNP1Q96S65 589 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 MYL10Q9BUA6 226 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 STX8Q9UNK0 236 aa13.75□□□□□ -0.21
AC087878.1-201ENST00000560709 DDTLA6NHG4 134 aaPredicted RBP13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 TRAK2O60296 914 aa13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 FDPSP14324 419 aaKnown RBP13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 SMARCA1P28370 1054 aa13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 CACNB3P54284 484 aa13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 GRM4Q14833 912 aa13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 CERKLQ49MI3 558 aaPredicted RBP13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 TMEM179Q6ZVK1 233 aa13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 CDC37L1Q7L3B6 337 aa13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 TMEM47Q9BQJ4 181 aa13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 KANSL2Q9H9L4 492 aa13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 GINM1Q9NU53 330 aa13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 MTMR4Q9NYA4 1195 aa13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 PCDHAC2Q9Y5I4 1007 aa13.74□□□□□ -0.21
AC087878.1-201ENST00000560709 ZNF541Q9H0D2 1346 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 DICER1Q9UPY3 1922 aaKnown RBP13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 TCP10L2B9ZVM9 353 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 PRPF3O43395 683 aaKnown RBP13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 NMT2O60551 498 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 RXRAP19793 462 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 KRT85P78386 507 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 KIF4BQ2VIQ3 1234 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 MCTP1Q6DN14 999 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 SH3BP5LQ7L8J4 393 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 BRAPQ7Z569 592 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 RAB11FIP4Q86YS3 637 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 APOBEC3FQ8IUX4 373 aaKnown RBP13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 CCDC144CPQ8IYA2 1237 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 TMEM87AQ8NBN3 555 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 FBXO18Q8NFZ0 1043 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 CEP95Q96GE4 821 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 ALG1Q9BT22 464 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 SLC26A6Q9BXS9 759 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 VEZTQ9HBM0 779 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 CABP5Q9NP86 173 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 NYAP2Q9P242 653 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 CNOT7Q9UIV1 285 aaKnown RBP13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 PPP2R3BQ9Y5P8 575 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 GJA3Q9Y6H8 435 aa13.73□□□□□ -0.21
AC087878.1-201ENST00000560709 CLRN2A0PK11 232 aa13.72□□□□□ -0.21
AC087878.1-201ENST00000560709 GRIN3BO60391 1043 aa13.72□□□□□ -0.21
AC087878.1-201ENST00000560709 MBD3O95983 291 aa13.72□□□□□ -0.21
AC087878.1-201ENST00000560709 AKR1B1P15121 316 aa13.72□□□□□ -0.21
AC087878.1-201ENST00000560709 PRELPP51888 382 aa13.72□□□□□ -0.21
AC087878.1-201ENST00000560709 SAFBQ15424 915 aaKnown RBP eCLIP13.72□□□□□ -0.21
AC087878.1-201ENST00000560709 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
AC087878.1-201ENST00000560709 NBPF11Q86T75 865 aa13.72□□□□□ -0.21
AC087878.1-201ENST00000560709 ZFPM1Q8IX07 1006 aa13.72□□□□□ -0.21
AC087878.1-201ENST00000560709 SCAND2PQ9GZW5 306 aaPredicted RBP13.72□□□□□ -0.21
AC087878.1-201ENST00000560709 DNAJC18Q9H819 358 aa13.72□□□□□ -0.21
AC087878.1-201ENST00000560709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.72□□□□□ -0.21
AC087878.1-201ENST00000560709 CFAP45Q9UL16 551 aa13.72□□□□□ -0.21
AC087878.1-201ENST00000560709 CNTNAP1P78357 1384 aa13.71□□□□□ -0.21
AC087878.1-201ENST00000560709 MPHOSPH10O00566 681 aaKnown RBP13.71□□□□□ -0.21
AC087878.1-201ENST00000560709 PARP1P09874 1014 aaKnown RBP13.71□□□□□ -0.21
AC087878.1-201ENST00000560709 LMOD1P29536 600 aaPredicted RBP13.71□□□□□ -0.21
AC087878.1-201ENST00000560709 RESTQ13127 1097 aa13.71□□□□□ -0.21
AC087878.1-201ENST00000560709 ABCB5Q2M3G0 1257 aa13.71□□□□□ -0.21
AC087878.1-201ENST00000560709 ASPRV1Q53RT3 343 aa13.71□□□□□ -0.21
AC087878.1-201ENST00000560709 PHKBQ93100 1093 aa13.71□□□□□ -0.21
AC087878.1-201ENST00000560709 ZNF396Q96N95 335 aaPredicted RBP13.71□□□□□ -0.21
AC087878.1-201ENST00000560709 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.71□□□□□ -0.21
AC087878.1-201ENST00000560709 GPRC5DQ9NZD1 345 aa13.71□□□□□ -0.21
AC087878.1-201ENST00000560709 GREB1LQ9C091 1923 aaPredicted RBP13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 CNTNAP5Q8WYK1 1306 aa13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 PALM3A6NDB9 673 aaPredicted RBP13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 hCG_1984214I3L0E3 225 aa13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 MAP3K10Q02779 954 aa13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 FUT2Q10981 343 aa13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 NBPF9Q3BBW0 867 aa13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 GPATCH4Q5T3I0 446 aaKnown RBP13.7□□□□□ -0.22
AC087878.1-201ENST00000560709 FOXD4L5Q5VV16 416 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms