RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 IRX3P78415 501 aaPredicted RBP14.07□□□□□ -0.16
LDLR-212ENST00000560467 C8orf34Q49A92 452 aa14.07□□□□□ -0.16
LDLR-212ENST00000560467 ANKLE1Q8NAG6 615 aa14.07□□□□□ -0.16
LDLR-212ENST00000560467 SLC17A8Q8NDX2 589 aa14.07□□□□□ -0.16
LDLR-212ENST00000560467 GDF15Q99988 308 aa14.07□□□□□ -0.16
LDLR-212ENST00000560467 TBC1D2Q9BYX2 928 aa14.07□□□□□ -0.16
LDLR-212ENST00000560467 DNAJC18Q9H819 358 aa14.07□□□□□ -0.16
LDLR-212ENST00000560467 TXNRD2Q9NNW7 524 aa14.07□□□□□ -0.16
LDLR-212ENST00000560467 HMX1Q9NP08 348 aaPredicted RBP14.07□□□□□ -0.16
LDLR-212ENST00000560467 MORF4L1Q9UBU8 362 aa14.07□□□□□ -0.16
LDLR-212ENST00000560467 RPTORQ8N122 1335 aa14.07□□□□□ -0.16
LDLR-212ENST00000560467 CUL9Q8IWT3 2517 aa14.06□□□□□ -0.16
LDLR-212ENST00000560467 RNF113AO15541 343 aaKnown RBP14.06□□□□□ -0.16
LDLR-212ENST00000560467 IDH1O75874 414 aaKnown RBP14.06□□□□□ -0.16
LDLR-212ENST00000560467 PRKAR2AP13861 404 aaKnown RBP14.06□□□□□ -0.16
LDLR-212ENST00000560467 SYN1P17600 705 aa14.06□□□□□ -0.16
LDLR-212ENST00000560467 MCCP23508 829 aa14.06□□□□□ -0.16
LDLR-212ENST00000560467 CWC27Q6UX04 472 aaKnown RBP14.06□□□□□ -0.16
LDLR-212ENST00000560467 MAPKAPK5Q8IW41 473 aa14.06□□□□□ -0.16
LDLR-212ENST00000560467 P2RX7Q99572 595 aaKnown RBP14.06□□□□□ -0.16
LDLR-212ENST00000560467 WDR18Q9BV38 432 aa14.06□□□□□ -0.16
LDLR-212ENST00000560467 NBPF3Q9H094 633 aa14.06□□□□□ -0.16
LDLR-212ENST00000560467 AS3MTQ9HBK9 375 aa14.06□□□□□ -0.16
LDLR-212ENST00000560467 AATFQ9NY61 560 aaKnown RBP eCLIP14.06□□□□□ -0.16
LDLR-212ENST00000560467 HERC5Q9UII4 1024 aaKnown RBP14.06□□□□□ -0.16
LDLR-212ENST00000560467 LOC285556D6RIA3 1793 aa14.05□□□□□ -0.16
LDLR-212ENST00000560467 GDF11O95390 407 aa14.05□□□□□ -0.16
LDLR-212ENST00000560467 BACE1P56817 501 aa14.05□□□□□ -0.16
LDLR-212ENST00000560467 SLC9C2Q5TAH2 1124 aa14.05□□□□□ -0.16
LDLR-212ENST00000560467 MAP3K21Q5TCX8 1036 aa14.05□□□□□ -0.16
LDLR-212ENST00000560467 NAA16Q6N069 864 aaPredicted RBP14.05□□□□□ -0.16
LDLR-212ENST00000560467 ADGRA1Q86SQ6 560 aa14.05□□□□□ -0.16
LDLR-212ENST00000560467 TGFBRAP1Q8WUH2 860 aa14.05□□□□□ -0.16
LDLR-212ENST00000560467 C11orf49Q9H6J7 331 aa14.05□□□□□ -0.16
LDLR-212ENST00000560467 TMOD4Q9NZQ9 345 aa14.05□□□□□ -0.16
LDLR-212ENST00000560467 PI4KBQ9UBF8 816 aa14.05□□□□□ -0.16
LDLR-212ENST00000560467 FLT1P17948 1338 aa14.05□□□□□ -0.16
LDLR-212ENST00000560467 DOCK3Q8IZD9 2030 aa14.04□□□□□ -0.16
LDLR-212ENST00000560467 DLL1O00548 723 aa14.04□□□□□ -0.16
LDLR-212ENST00000560467 MAGEA10P43363 369 aaPredicted RBP14.04□□□□□ -0.16
LDLR-212ENST00000560467 HERVK_113P62684 666 aa14.04□□□□□ -0.16
LDLR-212ENST00000560467 NOL10Q9BSC4 688 aaKnown RBP14.04□□□□□ -0.16
LDLR-212ENST00000560467 ESYT1Q9BSJ8 1104 aa14.04□□□□□ -0.16
LDLR-212ENST00000560467 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
LDLR-212ENST00000560467 HELLSQ9NRZ9 838 aa14.04□□□□□ -0.16
LDLR-212ENST00000560467 SAP30BPQ9UHR5 308 aaKnown RBP14.04□□□□□ -0.16
LDLR-212ENST00000560467 OGDHLQ9ULD0 1010 aa14.04□□□□□ -0.16
LDLR-212ENST00000560467 PFASO15067 1338 aa14.04□□□□□ -0.16
LDLR-212ENST00000560467 RAD50Q92878 1312 aa14.04□□□□□ -0.16
LDLR-212ENST00000560467 COL6A3P12111 3177 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 CYP2E1P05181 493 aaPredicted RBP14.03□□□□□ -0.16
LDLR-212ENST00000560467 ASNSP08243 561 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 HOXA7P31268 230 aaPredicted RBP14.03□□□□□ -0.16
LDLR-212ENST00000560467 BMP8BP34820 402 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 MCMDC2Q4G0Z9 681 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 POTEEQ6S8J3 1075 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 Q7L0L9 218 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 GPRC5AQ8NFJ5 357 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 SOCS4Q8WXH5 440 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 NUDT12Q9BQG2 462 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 PAGR1Q9BTK6 254 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 PORCNQ9H237 461 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 DHX36Q9H2U1 1008 aaKnown RBP14.03□□□□□ -0.16
LDLR-212ENST00000560467 RBPJLQ9UBG7 517 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 PALD1Q9ULE6 856 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 ZBTB21Q9ULJ3 1066 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 NDUFB9Q9Y6M9 179 aa14.03□□□□□ -0.16
LDLR-212ENST00000560467 A0A0C4DFX4 3053 aa14.02□□□□□ -0.16
LDLR-212ENST00000560467 ALPK3Q96L96 1907 aa14.02□□□□□ -0.16
LDLR-212ENST00000560467 EPB41L2O43491 1005 aaKnown RBP14.02□□□□□ -0.17
LDLR-212ENST00000560467 BAG3O95817 575 aa14.02□□□□□ -0.17
LDLR-212ENST00000560467 ZKSCAN1P17029 563 aaPredicted RBP14.02□□□□□ -0.17
LDLR-212ENST00000560467 CCL14Q16627 93 aa14.02□□□□□ -0.17
LDLR-212ENST00000560467 METTL16Q86W50 562 aaKnown RBP14.02□□□□□ -0.17
LDLR-212ENST00000560467 CRACR2BQ8N4Y2 399 aaPredicted RBP14.02□□□□□ -0.17
LDLR-212ENST00000560467 EDC3Q96F86 508 aaKnown RBP14.02□□□□□ -0.17
LDLR-212ENST00000560467 TRIM34Q9BYJ4 488 aa14.02□□□□□ -0.17
LDLR-212ENST00000560467 PIH1D3Q9NQM4 214 aaKnown RBP14.02□□□□□ -0.17
LDLR-212ENST00000560467 USP17L10C9JJH3 530 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 XRCC5P13010 732 aaKnown RBP14.01□□□□□ -0.17
LDLR-212ENST00000560467 PLCG2P16885 1265 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 CCND3P30281 292 aaPredicted RBP14.01□□□□□ -0.17
LDLR-212ENST00000560467 MAPK4P31152 587 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 PPP4CP60510 307 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 ERVK-9P63128 1117 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 ERVK-24P63145 666 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 DYNLL1P63167 89 aaKnown RBP14.01□□□□□ -0.17
LDLR-212ENST00000560467 CACNB2Q08289 660 aaPredicted RBP14.01□□□□□ -0.17
LDLR-212ENST00000560467 NMIQ13287 307 aaPredicted RBP14.01□□□□□ -0.17
LDLR-212ENST00000560467 UBE3CQ15386 1083 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 Q3C1V9 767 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 DEFB123Q8N688 67 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 APPBP2Q92624 585 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 USP6NLQ92738 828 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 ANTXR1Q9H6X2 564 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 EMILIN3Q9NT22 766 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 SIPA1L1O43166 1804 aa14.01□□□□□ -0.17
LDLR-212ENST00000560467 C19orf81C9J6K1 198 aa14□□□□□ -0.17
LDLR-212ENST00000560467 SGSM2O43147 1006 aa14□□□□□ -0.17
LDLR-212ENST00000560467 COL6A1P12109 1028 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms