RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 IGSF3O75054 1194 aa16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 CATIPQ7Z7H3 387 aa16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 DZIP1Q86YF9 867 aaKnown RBP16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 DHX40Q8IX18 779 aaKnown RBP16.68■□□□□ 0.26
RABGGTA-212ENST00000559974 ARFGEF1Q9Y6D6 1849 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 CUTAO60888 179 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 SLC3A2P08195 630 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 CALM1P0DP23 149 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 CALM2P0DP24 149 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 CALM3P0DP25 149 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 YBX3P16989 372 aaKnown RBP eCLIP16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 CDC25BP30305 580 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 SYKP43405 635 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 TERF1P54274 439 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 ZRSR1Q15695 479 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 SBK1Q52WX2 424 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 SHC4Q6S5L8 630 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 TBC1D16Q8TBP0 767 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 RBM28Q9NW13 759 aaKnown RBP16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 JAG2Q9Y219 1238 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 NAV1Q8NEY1 1877 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 XDHP47989 1333 aa16.67■□□□□ 0.26
RABGGTA-212ENST00000559974 UFL1O94874 794 aa16.66■□□□□ 0.26
RABGGTA-212ENST00000559974 AKAP17AQ02040 695 aaKnown RBP16.66■□□□□ 0.26
RABGGTA-212ENST00000559974 NOLC1Q14978 699 aaKnown RBP eCLIP16.66■□□□□ 0.26
RABGGTA-212ENST00000559974 RILPL1Q5EBL4 403 aa16.66■□□□□ 0.26
RABGGTA-212ENST00000559974 RESP18Q5W5W9 173 aa16.66■□□□□ 0.26
RABGGTA-212ENST00000559974 DRC7Q8IY82 874 aa16.66■□□□□ 0.26
RABGGTA-212ENST00000559974 WDR66Q8TBY9 1149 aa16.66■□□□□ 0.26
RABGGTA-212ENST00000559974 FER1L6Q2WGJ9 1857 aa16.66■□□□□ 0.26
RABGGTA-212ENST00000559974 CDK5RAP2Q96SN8 1893 aa16.66■□□□□ 0.26
RABGGTA-212ENST00000559974 COL4A5P29400 1685 aa16.66■□□□□ 0.26
RABGGTA-212ENST00000559974 DDAH1O94760 285 aa16.66■□□□□ 0.26
RABGGTA-212ENST00000559974 TPM2P07951 284 aa16.66■□□□□ 0.26
RABGGTA-212ENST00000559974 R3HCC1Q9Y3T6 440 aaKnown RBP16.66■□□□□ 0.26
RABGGTA-212ENST00000559974 PTGS1P23219 599 aa16.65■□□□□ 0.26
RABGGTA-212ENST00000559974 TOB1P50616 345 aaPredicted RBP16.65■□□□□ 0.26
RABGGTA-212ENST00000559974 FUT2Q10981 343 aa16.65■□□□□ 0.26
RABGGTA-212ENST00000559974 TROAPQ12815 778 aa16.65■□□□□ 0.26
RABGGTA-212ENST00000559974 BPIFA3Q9BQP9 254 aa16.65■□□□□ 0.26
RABGGTA-212ENST00000559974 SPTLC3Q9NUV7 552 aa16.65■□□□□ 0.26
RABGGTA-212ENST00000559974 C6orf229H3BNL8 230 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 RIMBP2O15034 1052 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 PRPF3O43395 683 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 LDHBP07195 334 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 XBP1P17861 261 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 PRELPP51888 382 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 EVX2Q03828 476 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 DPCR1Q3MIW9 517 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 DPP8Q6V1X1 898 aaPredicted RBP16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 ZNF804AQ7Z570 1209 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 AOPEPQ8N6M6 819 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 KRI1Q8N9T8 703 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 KIAA1524Q8TCG1 905 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 MRFAP1L1Q96HT8 127 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 CLIC6Q96NY7 704 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 PODXL2Q9NZ53 605 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 CLIP2Q9UDT6 1046 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 CYP2D6P10635 497 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 NLRP12P59046 1061 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 RASSF7Q02833 373 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 PDE4BQ07343 736 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 NR5A1Q13285 461 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 PKN1Q16512 942 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 C15orf52Q6ZUT6 534 aaKnown RBP16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 CCDC186Q7Z3E2 898 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 FBXW7Q969H0 707 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 GGA1Q9UJY5 639 aa16.64■□□□□ 0.25
RABGGTA-212ENST00000559974 NFKBIEO00221 500 aa16.63■□□□□ 0.25
RABGGTA-212ENST00000559974 PLEKHA8P1O95397 391 aa16.63■□□□□ 0.25
RABGGTA-212ENST00000559974 PYCARDQ9ULZ3 195 aa16.63■□□□□ 0.25
RABGGTA-212ENST00000559974 BAZ2BQ9UIF8 2168 aaKnown RBP16.63■□□□□ 0.25
RABGGTA-212ENST00000559974 GSTO1P78417 241 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 TMTC3Q6ZXV5 915 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 TMC4Q7Z404 712 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 C17orf53Q8N3J3 647 aaPredicted RBP16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 OXER1Q8TDS5 423 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 ZNF277Q9NRM2 450 aaPredicted RBP16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 MCM9Q9NXL9 1143 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 NRBP1Q9UHY1 535 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 NT5C2P49902 561 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 CCDC93Q567U6 631 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 FAM47AQ5JRC9 791 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 SHISA4Q96DD7 197 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 PHF20Q9BVI0 1012 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 VPS54Q9P1Q0 977 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 MKRN1Q9UHC7 482 aaKnown RBP16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 TUBE1Q9UJT0 475 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 KCNH3Q9ULD8 1083 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 CEP131Q9UPN4 1083 aa16.62■□□□□ 0.25
RABGGTA-212ENST00000559974 TSPY2A6NKD2 308 aa16.61■□□□□ 0.25
RABGGTA-212ENST00000559974 BIN1O00499 593 aa16.61■□□□□ 0.25
RABGGTA-212ENST00000559974 NMT2O60551 498 aa16.61■□□□□ 0.25
RABGGTA-212ENST00000559974 PTPREP23469 700 aa16.61■□□□□ 0.25
RABGGTA-212ENST00000559974 AOC3Q16853 763 aa16.61■□□□□ 0.25
RABGGTA-212ENST00000559974 CTCFLQ8NI51 663 aaPredicted RBP16.61■□□□□ 0.25
RABGGTA-212ENST00000559974 FBXO2Q9UK22 296 aaPredicted RBP16.61■□□□□ 0.25
RABGGTA-212ENST00000559974 PCDHB6Q9Y5E3 794 aa16.61■□□□□ 0.25
RABGGTA-212ENST00000559974 V9GY48 417 aaPredicted RBP16.61■□□□□ 0.25
RABGGTA-212ENST00000559974 CNTNAP5Q8WYK1 1306 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms