RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 MFSD4AQ8N468 514 aa8.43□□□□□ -1.06
GPHN-215ENST00000557654 CYB5D2Q8WUJ1 264 aa8.43□□□□□ -1.06
GPHN-215ENST00000557654 NKD1Q969G9 470 aa8.43□□□□□ -1.06
GPHN-215ENST00000557654 FBXL18Q96ME1 805 aa8.43□□□□□ -1.06
GPHN-215ENST00000557654 NT5C1AQ9BXI3 368 aa8.43□□□□□ -1.06
GPHN-215ENST00000557654 ANTXR1Q9H6X2 564 aa8.43□□□□□ -1.06
GPHN-215ENST00000557654 PODXL2Q9NZ53 605 aa8.43□□□□□ -1.06
GPHN-215ENST00000557654 DDX41Q9UJV9 622 aaKnown RBP8.43□□□□□ -1.06
GPHN-215ENST00000557654 VAV3Q9UKW4 847 aa8.43□□□□□ -1.06
GPHN-215ENST00000557654 FAM155AB1AL88 458 aaPredicted RBP8.42□□□□□ -1.06
GPHN-215ENST00000557654 ZNF865P0CJ78 1059 aaPredicted RBP8.42□□□□□ -1.06
GPHN-215ENST00000557654 STK11IPQ8N1F8 1099 aa8.42□□□□□ -1.06
GPHN-215ENST00000557654 MISP3Q96FF7 219 aa8.42□□□□□ -1.06
GPHN-215ENST00000557654 HSPA12BQ96MM6 686 aa8.42□□□□□ -1.06
GPHN-215ENST00000557654 KIF2CQ99661 725 aa8.42□□□□□ -1.06
GPHN-215ENST00000557654 CEP131Q9UPN4 1083 aa8.42□□□□□ -1.06
GPHN-215ENST00000557654 SLC22A31A6NKX4 558 aa8.41□□□□□ -1.06
GPHN-215ENST00000557654 H3BS24 57 aa8.41□□□□□ -1.06
GPHN-215ENST00000557654 TNK2Q07912 1038 aa8.41□□□□□ -1.06
GPHN-215ENST00000557654 ARSHQ5FYA8 562 aa8.41□□□□□ -1.06
GPHN-215ENST00000557654 OVOS1Q6IE37 1185 aa8.41□□□□□ -1.06
GPHN-215ENST00000557654 ZNF746Q6NUN9 644 aaPredicted RBP8.41□□□□□ -1.06
GPHN-215ENST00000557654 NT5DC4Q86YG4 428 aa8.41□□□□□ -1.06
GPHN-215ENST00000557654 SLITRK4Q8IW52 837 aa8.41□□□□□ -1.06
GPHN-215ENST00000557654 PHACTR4Q8IZ21 702 aa8.41□□□□□ -1.06
GPHN-215ENST00000557654 Q96M66 194 aa8.41□□□□□ -1.06
GPHN-215ENST00000557654 PITPNM2Q9BZ72 1349 aa8.4□□□□□ -1.06
GPHN-215ENST00000557654 ATE1O95260 518 aa8.4□□□□□ -1.06
GPHN-215ENST00000557654 POLR2BP30876 1174 aaKnown RBP8.4□□□□□ -1.06
GPHN-215ENST00000557654 ETV3P41162 512 aa8.4□□□□□ -1.06
GPHN-215ENST00000557654 TNNI2P48788 182 aa8.4□□□□□ -1.06
GPHN-215ENST00000557654 PLCL1Q15111 1095 aa8.4□□□□□ -1.06
GPHN-215ENST00000557654 C22orf34Q6ZV56 151 aa8.4□□□□□ -1.06
GPHN-215ENST00000557654 EHMT1Q9H9B1 1298 aa8.4□□□□□ -1.06
GPHN-215ENST00000557654 PRDM7Q9NQW5 492 aa8.4□□□□□ -1.06
GPHN-215ENST00000557654 ADGRE2Q9UHX3 823 aa8.4□□□□□ -1.06
GPHN-215ENST00000557654 SNX11Q9Y5W9 270 aa8.4□□□□□ -1.06
GPHN-215ENST00000557654 ST14Q9Y5Y6 855 aa8.4□□□□□ -1.06
GPHN-215ENST00000557654 LRRN2O75325 713 aa8.39□□□□□ -1.07
GPHN-215ENST00000557654 CYP7A1P22680 504 aa8.39□□□□□ -1.07
GPHN-215ENST00000557654 CLCN7P51798 805 aa8.39□□□□□ -1.07
GPHN-215ENST00000557654 ATP13A1Q9HD20 1204 aa8.39□□□□□ -1.07
GPHN-215ENST00000557654 SEMA3GQ9NS98 782 aa8.39□□□□□ -1.07
GPHN-215ENST00000557654 ADAMTS6Q9UKP5 1117 aa8.39□□□□□ -1.07
GPHN-215ENST00000557654 COL17A1Q9UMD9 1497 aaPredicted RBP8.38□□□□□ -1.07
GPHN-215ENST00000557654 WASH4PA8MWX3 477 aa8.38□□□□□ -1.07
GPHN-215ENST00000557654 IRAK1P51617 712 aa8.38□□□□□ -1.07
GPHN-215ENST00000557654 PAK2Q13177 524 aa8.38□□□□□ -1.07
GPHN-215ENST00000557654 IKZF1Q13422 519 aa8.38□□□□□ -1.07
GPHN-215ENST00000557654 AGBL5Q8NDL9 886 aa8.38□□□□□ -1.07
GPHN-215ENST00000557654 CCDC74BQ96LY2 380 aa8.38□□□□□ -1.07
GPHN-215ENST00000557654 GMIPQ9P107 970 aa8.38□□□□□ -1.07
GPHN-215ENST00000557654 UBOX5O94941 541 aa8.37□□□□□ -1.07
GPHN-215ENST00000557654 RAG1P15918 1043 aa8.37□□□□□ -1.07
GPHN-215ENST00000557654 FUT4P22083 530 aa8.37□□□□□ -1.07
GPHN-215ENST00000557654 ZNF165P49910 485 aa8.37□□□□□ -1.07
GPHN-215ENST00000557654 MLECQ14165 292 aa8.37□□□□□ -1.07
GPHN-215ENST00000557654 ZNF654Q8IZM8 581 aa8.37□□□□□ -1.07
GPHN-215ENST00000557654 REXO1Q8N1G1 1221 aaKnown RBP8.37□□□□□ -1.07
GPHN-215ENST00000557654 ASB11Q8WXH4 323 aa8.37□□□□□ -1.07
GPHN-215ENST00000557654 ATG4CQ96DT6 458 aa8.37□□□□□ -1.07
GPHN-215ENST00000557654 KREMEN1Q96MU8 473 aa8.37□□□□□ -1.07
GPHN-215ENST00000557654 ZSWIM5Q9P217 1185 aa8.37□□□□□ -1.07
GPHN-215ENST00000557654 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.37□□□□□ -1.07
GPHN-215ENST00000557654 GBP1P32455 592 aa8.36□□□□□ -1.07
GPHN-215ENST00000557654 KIR3DL1P43629 444 aa8.36□□□□□ -1.07
GPHN-215ENST00000557654 ZNF792Q3KQV3 632 aa8.36□□□□□ -1.07
GPHN-215ENST00000557654 ANGEL2Q5VTE6 544 aaKnown RBP8.36□□□□□ -1.07
GPHN-215ENST00000557654 UBE2FQ969M7 185 aa8.36□□□□□ -1.07
GPHN-215ENST00000557654 RGS13O14921 159 aa8.35□□□□□ -1.07
GPHN-215ENST00000557654 RBM25P49756 843 aaKnown RBP8.35□□□□□ -1.07
GPHN-215ENST00000557654 CBLL1Q75N03 491 aa8.35□□□□□ -1.07
GPHN-215ENST00000557654 NLRC3Q7RTR2 1065 aa8.35□□□□□ -1.07
GPHN-215ENST00000557654 DTWD2Q8NBA8 298 aa8.35□□□□□ -1.07
GPHN-215ENST00000557654 RNF141Q8WVD5 230 aa8.35□□□□□ -1.07
GPHN-215ENST00000557654 MBNL3Q9NUK0 354 aaKnown RBP8.35□□□□□ -1.07
GPHN-215ENST00000557654 PPT2Q9UMR5 302 aa8.35□□□□□ -1.07
GPHN-215ENST00000557654 FAM86C2PA6NEL3 165 aa8.34□□□□□ -1.07
GPHN-215ENST00000557654 RNASE1P07998 156 aaKnown RBP8.34□□□□□ -1.07
GPHN-215ENST00000557654 TAL1P17542 331 aaPredicted RBP8.34□□□□□ -1.07
GPHN-215ENST00000557654 ZP2Q05996 745 aa8.34□□□□□ -1.07
GPHN-215ENST00000557654 RAD51AP2Q09MP3 1159 aa8.34□□□□□ -1.07
GPHN-215ENST00000557654 CDCP2Q5VXM1 449 aa8.34□□□□□ -1.07
GPHN-215ENST00000557654 MCTP1Q6DN14 999 aa8.34□□□□□ -1.07
GPHN-215ENST00000557654 CCDC81Q6ZN84 652 aa8.34□□□□□ -1.07
GPHN-215ENST00000557654 TMEM40Q8WWA1 233 aa8.34□□□□□ -1.07
GPHN-215ENST00000557654 COX4I2Q96KJ9 171 aa8.34□□□□□ -1.07
GPHN-215ENST00000557654 CNNM2Q9H8M5 875 aa8.34□□□□□ -1.07
GPHN-215ENST00000557654 CARS2Q9HA77 564 aaKnown RBP8.34□□□□□ -1.07
GPHN-215ENST00000557654 GINM1Q9NU53 330 aa8.34□□□□□ -1.07
GPHN-215ENST00000557654 FBXW10Q5XX13 1052 aa8.33□□□□□ -1.08
GPHN-215ENST00000557654 PI4K2BQ8TCG2 481 aa8.33□□□□□ -1.08
GPHN-215ENST00000557654 ZNF512BQ96KM6 892 aaPredicted RBP8.33□□□□□ -1.08
GPHN-215ENST00000557654 DUSP15Q9H1R2 295 aaPredicted RBP8.33□□□□□ -1.08
GPHN-215ENST00000557654 ACBD3Q9H3P7 528 aa8.33□□□□□ -1.08
GPHN-215ENST00000557654 ZNRF3Q9ULT6 936 aa8.33□□□□□ -1.08
GPHN-215ENST00000557654 NME1P15531 152 aaKnown RBP8.32□□□□□ -1.08
GPHN-215ENST00000557654 LRRN4CLQ8ND94 238 aa8.32□□□□□ -1.08
GPHN-215ENST00000557654 PIWIL2Q8TC59 973 aaKnown RBP8.32□□□□□ -1.08
GPHN-215ENST00000557654 VWCEQ96DN2 955 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms