RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SBK1Q52WX2 424 aa14.95□□□□□ -0.02
SLIRP-211ENST00000557623 CTR9Q6PD62 1173 aa14.95□□□□□ -0.02
SLIRP-211ENST00000557623 TNS4Q8IZW8 715 aa14.95□□□□□ -0.02
SLIRP-211ENST00000557623 SEC62Q99442 399 aaKnown RBP14.95□□□□□ -0.02
SLIRP-211ENST00000557623 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.95□□□□□ -0.02
SLIRP-211ENST00000557623 PDHXO00330 501 aa14.94□□□□□ -0.02
SLIRP-211ENST00000557623 FKTNO75072 461 aa14.94□□□□□ -0.02
SLIRP-211ENST00000557623 GH2P01242 217 aa14.94□□□□□ -0.02
SLIRP-211ENST00000557623 CYP2D6P10635 497 aa14.94□□□□□ -0.02
SLIRP-211ENST00000557623 C7P10643 843 aa14.94□□□□□ -0.02
SLIRP-211ENST00000557623 PDE4AP27815 886 aa14.94□□□□□ -0.02
SLIRP-211ENST00000557623 TDO2P48775 406 aa14.94□□□□□ -0.02
SLIRP-211ENST00000557623 MOGSQ13724 837 aa14.94□□□□□ -0.02
SLIRP-211ENST00000557623 GADL1Q6ZQY3 521 aa14.94□□□□□ -0.02
SLIRP-211ENST00000557623 CCDC84Q86UT8 332 aaPredicted RBP14.94□□□□□ -0.02
SLIRP-211ENST00000557623 PROCA1Q8NCQ7 364 aaPredicted RBP14.94□□□□□ -0.02
SLIRP-211ENST00000557623 ZNF296Q8WUU4 475 aaPredicted RBP14.94□□□□□ -0.02
SLIRP-211ENST00000557623 SLC45A1Q9Y2W3 748 aa14.94□□□□□ -0.02
SLIRP-211ENST00000557623 C19orf81C9J6K1 198 aa14.93□□□□□ -0.02
SLIRP-211ENST00000557623 HIP1O00291 1037 aa14.93□□□□□ -0.02
SLIRP-211ENST00000557623 JAG1P78504 1218 aa14.93□□□□□ -0.02
SLIRP-211ENST00000557623 MCMDC2Q4G0Z9 681 aa14.93□□□□□ -0.02
SLIRP-211ENST00000557623 SH3D19Q5HYK7 790 aa14.93□□□□□ -0.02
SLIRP-211ENST00000557623 C16orf86Q6ZW13 317 aa14.93□□□□□ -0.02
SLIRP-211ENST00000557623 CENPQQ7L2Z9 268 aaPredicted RBP14.93□□□□□ -0.02
SLIRP-211ENST00000557623 IFNL3Q8IZI9 196 aa14.93□□□□□ -0.02
SLIRP-211ENST00000557623 CCDC17Q96LX7 622 aa14.93□□□□□ -0.02
SLIRP-211ENST00000557623 R3HDMLQ9H3Y0 253 aa14.93□□□□□ -0.02
SLIRP-211ENST00000557623 CYP2D7A0A087X1C5 515 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.92□□□□□ -0.02
SLIRP-211ENST00000557623 MINDY4BA8MYZ0 360 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 USP17L10C9JJH3 530 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 TLR2O60603 784 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 SDSP20132 328 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 CDK8P49336 464 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 MFAP1P55081 439 aaKnown RBP14.92□□□□□ -0.02
SLIRP-211ENST00000557623 BACE1P56817 501 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 PABPC4Q13310 644 aaKnown RBP eCLIP14.92□□□□□ -0.023e-8■□□□□ 8.6
SLIRP-211ENST00000557623 RAB3GAP1Q15042 981 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 TTC22Q5TAA0 569 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 GPAT2Q6NUI2 795 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 DYNLL2Q96FJ2 89 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 ZFP91Q96JP5 570 aaPredicted RBP14.92□□□□□ -0.02
SLIRP-211ENST00000557623 PARK7Q99497 189 aaKnown RBP14.92□□□□□ -0.02
SLIRP-211ENST00000557623 NAPBQ9H115 298 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 ZNF287Q9HBT7 754 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 RTN4Q9NQC3 1192 aaKnown RBP14.92□□□□□ -0.02
SLIRP-211ENST00000557623 TMOD4Q9NZQ9 345 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 AGTPBP1Q9UPW5 1226 aa14.92□□□□□ -0.02
SLIRP-211ENST00000557623 ROBO3Q96MS0 1386 aa14.91□□□□□ -0.02
SLIRP-211ENST00000557623 MPHOSPH10O00566 681 aaKnown RBP14.91□□□□□ -0.02
SLIRP-211ENST00000557623 SLC3A2P08195 630 aaKnown RBP14.91□□□□□ -0.02
SLIRP-211ENST00000557623 HMGCS2P54868 508 aa14.91□□□□□ -0.02
SLIRP-211ENST00000557623 SP3Q02447 781 aa14.91□□□□□ -0.02
SLIRP-211ENST00000557623 NMIQ13287 307 aaPredicted RBP14.91□□□□□ -0.02
SLIRP-211ENST00000557623 SHROOM1Q2M3G4 852 aaPredicted RBP14.91□□□□□ -0.02
SLIRP-211ENST00000557623 TMEM179Q6ZVK1 233 aa14.91□□□□□ -0.02
SLIRP-211ENST00000557623 CTU1Q7Z7A3 348 aaKnown RBP14.91□□□□□ -0.02
SLIRP-211ENST00000557623 SLC44A5Q8NCS7 719 aa14.91□□□□□ -0.02
SLIRP-211ENST00000557623 ERO1AQ96HE7 468 aa14.91□□□□□ -0.02
SLIRP-211ENST00000557623 FAM227BQ96M60 508 aa14.91□□□□□ -0.02
SLIRP-211ENST00000557623 EPB41L4AQ9HCS5 686 aaPredicted RBP14.91□□□□□ -0.02
SLIRP-211ENST00000557623 DIAPH3Q9NSV4 1193 aa14.91□□□□□ -0.02
SLIRP-211ENST00000557623 METRNQ9UJH8 293 aa14.91□□□□□ -0.02
SLIRP-211ENST00000557623 PNMA3Q9UL41 463 aa14.91□□□□□ -0.02
SLIRP-211ENST00000557623 A0A0D9SFI3 127 aa14.9□□□□□ -0.02
SLIRP-211ENST00000557623 USP14P54578 494 aa14.9□□□□□ -0.02
SLIRP-211ENST00000557623 DGKZQ13574 1117 aa14.9□□□□□ -0.02
SLIRP-211ENST00000557623 MTMR2Q13614 643 aa14.9□□□□□ -0.02
SLIRP-211ENST00000557623 ARHGEF6Q15052 776 aa14.9□□□□□ -0.02
SLIRP-211ENST00000557623 IER5LQ5T953 404 aa14.9□□□□□ -0.02
SLIRP-211ENST00000557623 USP17L2Q6R6M4 530 aa14.9□□□□□ -0.02
SLIRP-211ENST00000557623 CCDC129Q6ZRS4 1044 aa14.9□□□□□ -0.02
SLIRP-211ENST00000557623 FEZ1Q99689 392 aa14.9□□□□□ -0.02
SLIRP-211ENST00000557623 MKNK2Q9HBH9 465 aa14.9□□□□□ -0.02
SLIRP-211ENST00000557623 MGAMO43451 1857 aa14.9□□□□□ -0.02
SLIRP-211ENST00000557623 GREB1LQ9C091 1923 aaPredicted RBP14.9□□□□□ -0.02
SLIRP-211ENST00000557623 OSBPP22059 807 aa14.89□□□□□ -0.03
SLIRP-211ENST00000557623 SEPT2Q15019 361 aa14.89□□□□□ -0.03
SLIRP-211ENST00000557623 PKN2Q16513 984 aaKnown RBP14.89□□□□□ -0.03
SLIRP-211ENST00000557623 CCDC136Q96JN2 1154 aa14.89□□□□□ -0.03
SLIRP-211ENST00000557623 CCDC171Q6TFL3 1326 aa14.89□□□□□ -0.03
SLIRP-211ENST00000557623 MYH4Q9Y623 1939 aa14.88□□□□□ -0.03
SLIRP-211ENST00000557623 AKR1B1P15121 316 aa14.88□□□□□ -0.03
SLIRP-211ENST00000557623 GUCY1A2P33402 732 aa14.88□□□□□ -0.03
SLIRP-211ENST00000557623 PDE4BQ07343 736 aa14.88□□□□□ -0.03
SLIRP-211ENST00000557623 PPARAQ07869 468 aa14.88□□□□□ -0.03
SLIRP-211ENST00000557623 KIF22Q14807 665 aa14.88□□□□□ -0.03
SLIRP-211ENST00000557623 ALX1Q15699 326 aa14.88□□□□□ -0.03
SLIRP-211ENST00000557623 TREML2Q5T2D2 321 aa14.88□□□□□ -0.03
SLIRP-211ENST00000557623 C17orf99Q6UX52 265 aa14.88□□□□□ -0.03
SLIRP-211ENST00000557623 SMCR8Q8TEV9 937 aaPredicted RBP14.88□□□□□ -0.03
SLIRP-211ENST00000557623 KIAA1683Q9H0B3 1180 aa14.88□□□□□ -0.03
SLIRP-211ENST00000557623 ADGRA2Q96PE1 1338 aa14.88□□□□□ -0.03
SLIRP-211ENST00000557623 SMIM22K7EJ46 135 aa14.87□□□□□ -0.03
SLIRP-211ENST00000557623 CYP2C8P10632 490 aa14.87□□□□□ -0.03
SLIRP-211ENST00000557623 GSPT1P15170 499 aaKnown RBP14.87□□□□□ -0.03
SLIRP-211ENST00000557623 HOXA7P31268 230 aaPredicted RBP14.87□□□□□ -0.03
SLIRP-211ENST00000557623 CWC27Q6UX04 472 aaKnown RBP14.87□□□□□ -0.03
SLIRP-211ENST00000557623 ZNF444Q8N0Y2 327 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms