RNA–Protein interactions for RNA: ENST00000557389.1

NFKBIA-209, Transcript of NFKB inhibitor alpha, human

TSL 2 BASIC

Gene NFKBIA, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKBIA-209	ENST00000557389	LDHD	Q86WU2	507 aa		32.98	■■■□□ 2.87
NFKBIA-209	ENST00000557389	IPO9	Q96P70	1041 aa	Known RBP	32.98	■■■□□ 2.87
NFKBIA-209	ENST00000557389	CABP5	Q9NP86	173 aa		32.98	■■■□□ 2.87
NFKBIA-209	ENST00000557389	DAXX	Q9UER7	740 aa	Predicted RBP	32.98	■■■□□ 2.87
NFKBIA-209	ENST00000557389	CCDC178	Q5BJE1	867 aa		32.97	■■■□□ 2.87
NFKBIA-209	ENST00000557389	IGKV6D-41	A0A0C4DH26	115 aa		32.97	■■■□□ 2.87
NFKBIA-209	ENST00000557389	GOLGA8B	A8MQT2	603 aa		32.97	■■■□□ 2.87
NFKBIA-209	ENST00000557389	PHF20L1	A8MW92	1017 aa		32.97	■■■□□ 2.87
NFKBIA-209	ENST00000557389	SEPT2	Q15019	361 aa		32.97	■■■□□ 2.87
NFKBIA-209	ENST00000557389	RAB3GAP1	Q15042	981 aa		32.97	■■■□□ 2.87
NFKBIA-209	ENST00000557389	TMEM179	Q6ZVK1	233 aa		32.97	■■■□□ 2.87
NFKBIA-209	ENST00000557389	SGMS1	Q86VZ5	419 aa		32.97	■■■□□ 2.87
NFKBIA-209	ENST00000557389	NECAB1	Q8N987	351 aa		32.97	■■■□□ 2.87
NFKBIA-209	ENST00000557389	ZSCAN31	Q96LW9	406 aa	Predicted RBP	32.97	■■■□□ 2.87
NFKBIA-209	ENST00000557389	MYL10	Q9BUA6	226 aa		32.97	■■■□□ 2.87
NFKBIA-209	ENST00000557389	ATP2B2	Q01814	1243 aa		32.96	■■■□□ 2.87
NFKBIA-209	ENST00000557389	SPRYD3	Q8NCJ5	442 aa		32.96	■■■□□ 2.87
NFKBIA-209	ENST00000557389	MTMR4	Q9NYA4	1195 aa		32.96	■■■□□ 2.87
NFKBIA-209	ENST00000557389	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	32.96	■■■□□ 2.87
NFKBIA-209	ENST00000557389	OTOF	Q9HC10	1997 aa		32.95	■■■□□ 2.87
NFKBIA-209	ENST00000557389	GUCY1A2	P33402	732 aa		32.95	■■■□□ 2.87
NFKBIA-209	ENST00000557389	CAP2	P40123	477 aa		32.95	■■■□□ 2.87
NFKBIA-209	ENST00000557389	DGKH	Q86XP1	1220 aa		32.95	■■■□□ 2.87
NFKBIA-209	ENST00000557389	TMTC2	Q8N394	836 aa		32.95	■■■□□ 2.87
NFKBIA-209	ENST00000557389	KAT14	Q9H8E8	782 aa		32.95	■■■□□ 2.87
NFKBIA-209	ENST00000557389	ZBTB21	Q9ULJ3	1066 aa		32.95	■■■□□ 2.87
NFKBIA-209	ENST00000557389	SLC12A7	Q9Y666	1083 aa		32.95	■■■□□ 2.87
NFKBIA-209	ENST00000557389	RXRA	P19793	462 aa		32.94	■■■□□ 2.86
NFKBIA-209	ENST00000557389	APOA5	Q6Q788	366 aa		32.94	■■■□□ 2.86
NFKBIA-209	ENST00000557389	MICU3	Q86XE3	530 aa		32.94	■■■□□ 2.86
NFKBIA-209	ENST00000557389	ZNF654	Q8IZM8	581 aa		32.94	■■■□□ 2.86
NFKBIA-209	ENST00000557389	WRNIP1	Q96S55	665 aa		32.94	■■■□□ 2.86
NFKBIA-209	ENST00000557389	FOXD4L1	Q9NU39	408 aa		32.94	■■■□□ 2.86
NFKBIA-209	ENST00000557389	TRAF5	O00463	557 aa		32.93	■■■□□ 2.86
NFKBIA-209	ENST00000557389	PDIA3	P30101	505 aa	Known RBP	32.93	■■■□□ 2.86
NFKBIA-209	ENST00000557389	INPP5B	P32019	993 aa		32.93	■■■□□ 2.86
NFKBIA-209	ENST00000557389	EVC	P57679	992 aa		32.93	■■■□□ 2.86
NFKBIA-209	ENST00000557389	CCDC83	Q8IWF9	413 aa		32.93	■■■□□ 2.86
NFKBIA-209	ENST00000557389	ZNF274	Q96GC6	653 aa	Predicted RBP	32.93	■■■□□ 2.86
NFKBIA-209	ENST00000557389	SLK	Q9H2G2	1235 aa	Predicted RBP	32.93	■■■□□ 2.86
NFKBIA-209	ENST00000557389	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.93	■■■□□ 2.86
NFKBIA-209	ENST00000557389	SH2B1	Q9NRF2	756 aa	Predicted RBP	32.93	■■■□□ 2.86
NFKBIA-209	ENST00000557389	NF2	P35240	595 aa		32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	CCT2	P78371	535 aa	Known RBP	32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	SYNE3	Q6ZMZ3	975 aa		32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	CCDC144CP	Q8IYA2	1237 aa		32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	TMEM47	Q9BQJ4	181 aa		32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	CLIP2	Q9UDT6	1046 aa		32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	PAPPA2	Q9BXP8	1791 aa		32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	ZBTB43	O43298	467 aa		32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	ICA1	Q05084	483 aa		32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	FMR1	Q06787	632 aa	Known RBP eCLIP	32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	LRRC47	Q8N1G4	583 aa	Known RBP	32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	NUP133	Q8WUM0	1156 aa		32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	ANKS1A	Q92625	1134 aa		32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	CHMP4C	Q96CF2	233 aa		32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	MTMR7	Q9Y216	660 aa		32.92	■■■□□ 2.86
NFKBIA-209	ENST00000557389	TTLL1	O95922	423 aa		32.91	■■■□□ 2.86
NFKBIA-209	ENST00000557389	HSP90AA1	P07900	732 aa	Known RBP	32.91	■■■□□ 2.86
NFKBIA-209	ENST00000557389	ST3GAL1	Q11201	340 aa		32.91	■■■□□ 2.86
NFKBIA-209	ENST00000557389	CATIP	Q7Z7H3	387 aa		32.91	■■■□□ 2.86
NFKBIA-209	ENST00000557389	ZNF408	Q9H9D4	720 aa		32.91	■■■□□ 2.86
NFKBIA-209	ENST00000557389	KANSL2	Q9H9L4	492 aa		32.91	■■■□□ 2.86
NFKBIA-209	ENST00000557389	USP2	O75604	605 aa	Predicted RBP	32.9	■■■□□ 2.86
NFKBIA-209	ENST00000557389	CCDC84	Q86UT8	332 aa	Predicted RBP	32.9	■■■□□ 2.86
NFKBIA-209	ENST00000557389	PNMA1	Q8ND90	353 aa		32.9	■■■□□ 2.86
NFKBIA-209	ENST00000557389	NCOA5	Q9HCD5	579 aa	Known RBP	32.9	■■■□□ 2.86
NFKBIA-209	ENST00000557389	ZNF112	Q9UJU3	913 aa		32.9	■■■□□ 2.86
NFKBIA-209	ENST00000557389	HPS5	Q9UPZ3	1129 aa		32.9	■■■□□ 2.86
NFKBIA-209	ENST00000557389	PFKFB2	O60825	505 aa		32.89	■■■□□ 2.86
NFKBIA-209	ENST00000557389	TOP1	P11387	765 aa	Known RBP	32.89	■■■□□ 2.86
NFKBIA-209	ENST00000557389	EEF2	P13639	858 aa	Known RBP	32.89	■■■□□ 2.86
NFKBIA-209	ENST00000557389	NOV	P48745	357 aa		32.89	■■■□□ 2.86
NFKBIA-209	ENST00000557389	TTLL12	Q14166	644 aa	Predicted RBP	32.89	■■■□□ 2.86
NFKBIA-209	ENST00000557389	ZKSCAN4	Q969J2	545 aa	Predicted RBP	32.89	■■■□□ 2.86
NFKBIA-209	ENST00000557389	KLRG1	Q96E93	195 aa		32.89	■■■□□ 2.86
NFKBIA-209	ENST00000557389	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	32.89	■■■□□ 2.86
NFKBIA-209	ENST00000557389	GOLGA8A	A7E2F4	631 aa		32.88	■■■□□ 2.85
NFKBIA-209	ENST00000557389	PPP1R12B	O60237	982 aa	Predicted RBP	32.88	■■■□□ 2.85
NFKBIA-209	ENST00000557389	CTNND1	O60716	968 aa	Known RBP	32.88	■■■□□ 2.85
NFKBIA-209	ENST00000557389	DTNB	O60941	627 aa		32.88	■■■□□ 2.85
NFKBIA-209	ENST00000557389	ASNS	P08243	561 aa		32.88	■■■□□ 2.85
NFKBIA-209	ENST00000557389	METAP2	P50579	478 aa	Known RBP eCLIP	32.88	■■■□□ 2.85
NFKBIA-209	ENST00000557389	SCRN1	Q12765	414 aa		32.88	■■■□□ 2.85
NFKBIA-209	ENST00000557389	GTF3C6	Q969F1	213 aa		32.88	■■■□□ 2.85
NFKBIA-209	ENST00000557389	CUL4A	Q13619	759 aa		32.87	■■■□□ 2.85
NFKBIA-209	ENST00000557389	PPP4R3B	Q5MIZ7	849 aa		32.87	■■■□□ 2.85
NFKBIA-209	ENST00000557389	MOB2	Q70IA6	237 aa		32.87	■■■□□ 2.85
NFKBIA-209	ENST00000557389	SCYL3	Q8IZE3	742 aa		32.87	■■■□□ 2.85
NFKBIA-209	ENST00000557389	CHADL	Q6NUI6	762 aa		32.86	■■■□□ 2.85
NFKBIA-209	ENST00000557389	SIAH1	Q8IUQ4	282 aa		32.86	■■■□□ 2.85
NFKBIA-209	ENST00000557389	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	32.86	■■■□□ 2.85	8e-8	■□□□□ 9.1
NFKBIA-209	ENST00000557389	NYAP2	Q9P242	653 aa		32.86	■■■□□ 2.85
NFKBIA-209	ENST00000557389	DDAH1	O94760	285 aa		32.85	■■■□□ 2.85
NFKBIA-209	ENST00000557389	RASGRP2	Q7LDG7	609 aa		32.85	■■■□□ 2.85
NFKBIA-209	ENST00000557389	IREB2	P48200	963 aa	Known RBP	32.84	■■■□□ 2.85
NFKBIA-209	ENST00000557389	TROAP	Q12815	778 aa		32.84	■■■□□ 2.85
NFKBIA-209	ENST00000557389	PHIP	Q8WWQ0	1821 aa		32.84	■■■□□ 2.85
NFKBIA-209	ENST00000557389	RAD21	O60216	631 aa		32.83	■■■□□ 2.85
NFKBIA-209	ENST00000557389	RTN1	Q16799	776 aa		32.83	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms