RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 PRDM10Q9NQV6 1147 aa7.96□□□□□ -1.14
FOXN3-206ENST00000554005 SERINC3Q13530 473 aa7.95□□□□□ -1.14
FOXN3-206ENST00000554005 LETMD1Q6P1Q0 360 aa7.95□□□□□ -1.14
FOXN3-206ENST00000554005 TOP6BLQ8N6T0 577 aa7.95□□□□□ -1.14
FOXN3-206ENST00000554005 CELF2-AS1Q8N7Q2 184 aa7.95□□□□□ -1.14
FOXN3-206ENST00000554005 DNAJB8Q8NHS0 232 aa7.95□□□□□ -1.14
FOXN3-206ENST00000554005 GATA6Q92908 595 aa7.95□□□□□ -1.14
FOXN3-206ENST00000554005 TRIM55Q9BYV6 548 aa7.95□□□□□ -1.14
FOXN3-206ENST00000554005 STOML1Q9UBI4 398 aa7.95□□□□□ -1.14
FOXN3-206ENST00000554005 R3HCC1Q9Y3T6 440 aaKnown RBP7.95□□□□□ -1.14
FOXN3-206ENST00000554005 PROCP04070 461 aa7.94□□□□□ -1.14
FOXN3-206ENST00000554005 CCNFP41002 786 aa7.94□□□□□ -1.14
FOXN3-206ENST00000554005 DPH6Q7L8W6 267 aa7.94□□□□□ -1.14
FOXN3-206ENST00000554005 SLC12A7Q9Y666 1083 aa7.94□□□□□ -1.14
FOXN3-206ENST00000554005 LTBP3Q9NS15 1303 aa7.94□□□□□ -1.14
FOXN3-206ENST00000554005 LEFTY1O75610 366 aa7.93□□□□□ -1.14
FOXN3-206ENST00000554005 GBP1P32455 592 aa7.93□□□□□ -1.14
FOXN3-206ENST00000554005 ADMP35318 185 aa7.93□□□□□ -1.14
FOXN3-206ENST00000554005 LARP1BQ659C4 914 aaKnown RBP7.93□□□□□ -1.14
FOXN3-206ENST00000554005 TMEM192Q8IY95 271 aa7.93□□□□□ -1.14
FOXN3-206ENST00000554005 RIN3Q8TB24 985 aa7.93□□□□□ -1.14
FOXN3-206ENST00000554005 DUSP23Q9BVJ7 150 aa7.93□□□□□ -1.14
FOXN3-206ENST00000554005 FAM87AP0C7U9 286 aa7.92□□□□□ -1.14
FOXN3-206ENST00000554005 DOC2BQ14184 412 aa7.92□□□□□ -1.14
FOXN3-206ENST00000554005 DDR2Q16832 855 aa7.92□□□□□ -1.14
FOXN3-206ENST00000554005 CCDC144BQ3MJ40 725 aa7.92□□□□□ -1.14
FOXN3-206ENST00000554005 ZAR1Q86SH2 424 aa7.92□□□□□ -1.14
FOXN3-206ENST00000554005 CDH24Q86UP0 819 aa7.92□□□□□ -1.14
FOXN3-206ENST00000554005 SHISA5Q8N114 240 aa7.92□□□□□ -1.14
FOXN3-206ENST00000554005 MICAL1Q8TDZ2 1067 aa7.92□□□□□ -1.14
FOXN3-206ENST00000554005 SLC6A18Q96N87 628 aa7.92□□□□□ -1.14
FOXN3-206ENST00000554005 TBC1D32Q96NH3 1257 aa7.92□□□□□ -1.14
FOXN3-206ENST00000554005 SPOCK3Q9BQ16 436 aa7.92□□□□□ -1.14
FOXN3-206ENST00000554005 OSBPL2Q9H1P3 480 aa7.92□□□□□ -1.14
FOXN3-206ENST00000554005 PHAXQ9H814 394 aaKnown RBP7.92□□□□□ -1.14
FOXN3-206ENST00000554005 CEP131Q9UPN4 1083 aa7.92□□□□□ -1.14
FOXN3-206ENST00000554005 COL17A1Q9UMD9 1497 aaPredicted RBP7.92□□□□□ -1.14
FOXN3-206ENST00000554005 EOMESO95936 686 aa7.91□□□□□ -1.14
FOXN3-206ENST00000554005 FXNQ16595 210 aa7.91□□□□□ -1.14
FOXN3-206ENST00000554005 RNF43Q68DV7 783 aa7.91□□□□□ -1.14
FOXN3-206ENST00000554005 SIRPGQ9P1W8 387 aa7.91□□□□□ -1.14
FOXN3-206ENST00000554005 ZNF214Q9UL59 606 aaPredicted RBP7.91□□□□□ -1.14
FOXN3-206ENST00000554005 B2RBV5 119 aa7.9□□□□□ -1.14
FOXN3-206ENST00000554005 U2SURPO15042 1029 aaKnown RBP7.9□□□□□ -1.14
FOXN3-206ENST00000554005 CLEC3AO75596 197 aa7.9□□□□□ -1.14
FOXN3-206ENST00000554005 H2AFB1P0C5Y9 115 aa7.9□□□□□ -1.14
FOXN3-206ENST00000554005 H2AFB2P0C5Z0 115 aa7.9□□□□□ -1.14
FOXN3-206ENST00000554005 ETV3P41162 512 aa7.9□□□□□ -1.14
FOXN3-206ENST00000554005 OGFOD3Q6PK18 319 aa7.9□□□□□ -1.14
FOXN3-206ENST00000554005 C6orf15Q6UXA7 325 aaPredicted RBP7.9□□□□□ -1.14
FOXN3-206ENST00000554005 PPFIBP1Q86W92 1011 aa7.9□□□□□ -1.14
FOXN3-206ENST00000554005 GIMAP7Q8NHV1 300 aa7.9□□□□□ -1.14
FOXN3-206ENST00000554005 DHRS1Q96LJ7 313 aa7.9□□□□□ -1.14
FOXN3-206ENST00000554005 MFSD14AQ96MC6 490 aa7.9□□□□□ -1.14
FOXN3-206ENST00000554005 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.9□□□□□ -1.144e-7■■■■■ 36.9
FOXN3-206ENST00000554005 ST7Q9NRC1 585 aa7.9□□□□□ -1.14
FOXN3-206ENST00000554005 SUCOQ9UBS9 1254 aaKnown RBP7.9□□□□□ -1.14
FOXN3-206ENST00000554005 PCDHB10Q9UN67 800 aa7.9□□□□□ -1.14
FOXN3-206ENST00000554005 CNTNAP4Q9C0A0 1308 aa7.89□□□□□ -1.15
FOXN3-206ENST00000554005 FAM170BA6NMN3 283 aa7.89□□□□□ -1.15
FOXN3-206ENST00000554005 PMS1P54277 932 aaKnown RBP7.89□□□□□ -1.15
FOXN3-206ENST00000554005 NFIAQ12857 509 aa7.89□□□□□ -1.15
FOXN3-206ENST00000554005 NKAPLQ5M9Q1 402 aa7.89□□□□□ -1.15
FOXN3-206ENST00000554005 VHLLQ6RSH7 139 aa7.89□□□□□ -1.15
FOXN3-206ENST00000554005 FAM214BQ7L5A3 538 aa7.89□□□□□ -1.15
FOXN3-206ENST00000554005 FBXL6Q8N531 539 aa7.89□□□□□ -1.15
FOXN3-206ENST00000554005 KLHL6Q8WZ60 621 aa7.89□□□□□ -1.15
FOXN3-206ENST00000554005 KREMEN1Q96MU8 473 aa7.89□□□□□ -1.15
FOXN3-206ENST00000554005 ZSWIM4Q9H7M6 989 aa7.89□□□□□ -1.15
FOXN3-206ENST00000554005 MAPK8IP1Q9UQF2 711 aa7.89□□□□□ -1.15
FOXN3-206ENST00000554005 MSRB2Q9Y3D2 182 aa7.89□□□□□ -1.15
FOXN3-206ENST00000554005 RBAK-RBAKDNI3L0D1 243 aa7.88□□□□□ -1.15
FOXN3-206ENST00000554005 MSTNO14793 375 aa7.88□□□□□ -1.15
FOXN3-206ENST00000554005 GJB6O95452 261 aa7.88□□□□□ -1.15
FOXN3-206ENST00000554005 F13BP05160 661 aa7.88□□□□□ -1.15
FOXN3-206ENST00000554005 BMS1Q14692 1282 aaKnown RBP7.88□□□□□ -1.15
FOXN3-206ENST00000554005 RSPO4Q2I0M5 234 aaPredicted RBP7.88□□□□□ -1.15
FOXN3-206ENST00000554005 TDRD10Q5VZ19 366 aaKnown RBP7.88□□□□□ -1.15
FOXN3-206ENST00000554005 GPAT2Q6NUI2 795 aa7.88□□□□□ -1.15
FOXN3-206ENST00000554005 ZNF746Q6NUN9 644 aaPredicted RBP7.88□□□□□ -1.15
FOXN3-206ENST00000554005 ZNF765Q7L2R6 523 aa7.88□□□□□ -1.15
FOXN3-206ENST00000554005 FAM178BQ8IXR5 827 aa7.88□□□□□ -1.15
FOXN3-206ENST00000554005 VWCEQ96DN2 955 aa7.88□□□□□ -1.15
FOXN3-206ENST00000554005 ZNF512BQ96KM6 892 aaPredicted RBP7.88□□□□□ -1.15
FOXN3-206ENST00000554005 DBNDD2Q9BQY9 259 aa7.88□□□□□ -1.15
FOXN3-206ENST00000554005 PIF1Q9H611 641 aa7.88□□□□□ -1.15
FOXN3-206ENST00000554005 TPX2Q9ULW0 747 aaKnown RBP7.88□□□□□ -1.15
FOXN3-206ENST00000554005 C9IYK1 514 aa7.87□□□□□ -1.15
FOXN3-206ENST00000554005 K7ELQ4 463 aaPredicted RBP7.87□□□□□ -1.15
FOXN3-206ENST00000554005 DDAH1O94760 285 aa7.87□□□□□ -1.15
FOXN3-206ENST00000554005 FSTP19883 344 aa7.87□□□□□ -1.15
FOXN3-206ENST00000554005 SLC7A5Q01650 507 aa7.87□□□□□ -1.15
FOXN3-206ENST00000554005 RASA3Q14644 834 aa7.87□□□□□ -1.15
FOXN3-206ENST00000554005 NCAPHQ15003 741 aa7.87□□□□□ -1.15
FOXN3-206ENST00000554005 BBS9Q3SYG4 887 aa7.87□□□□□ -1.15
FOXN3-206ENST00000554005 GNPTABQ3T906 1256 aa7.87□□□□□ -1.15
FOXN3-206ENST00000554005 NBPF12Q5TAG4 269 aaPredicted RBP7.87□□□□□ -1.15
FOXN3-206ENST00000554005 MRM1Q6IN84 353 aaKnown RBP7.87□□□□□ -1.15
FOXN3-206ENST00000554005 RNF141Q8WVD5 230 aa7.87□□□□□ -1.15
FOXN3-206ENST00000554005 MKL1Q969V6 931 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms