RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 CDC27P30260 824 aa12.68□□□□□ -0.38
PABPN1-203ENST00000553960 EVX2Q03828 476 aa12.68□□□□□ -0.38
PABPN1-203ENST00000553960 GRM4Q14833 912 aa12.68□□□□□ -0.38
PABPN1-203ENST00000553960 RRP12Q5JTH9 1297 aaKnown RBP12.68□□□□□ -0.38
PABPN1-203ENST00000553960 NFXL1Q6ZNB6 911 aa12.68□□□□□ -0.38
PABPN1-203ENST00000553960 APOBEC3FQ8IUX4 373 aaKnown RBP12.68□□□□□ -0.38
PABPN1-203ENST00000553960 ZFPM1Q8IX07 1006 aa12.68□□□□□ -0.38
PABPN1-203ENST00000553960 MICALL2Q8IY33 904 aa12.68□□□□□ -0.38
PABPN1-203ENST00000553960 TEPSINQ96N21 525 aa12.68□□□□□ -0.38
PABPN1-203ENST00000553960 SPZ1Q9BXG8 430 aa12.68□□□□□ -0.38
PABPN1-203ENST00000553960 TOMM22Q9NS69 142 aa12.68□□□□□ -0.38
PABPN1-203ENST00000553960 SAP30BPQ9UHR5 308 aaKnown RBP12.68□□□□□ -0.38
PABPN1-203ENST00000553960 DDX11L8A8MPP1 907 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 SOCS7O14512 581 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 PRDM1O75626 825 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 DEXIO95424 95 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 F13A1P00488 732 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 MCM4P33991 863 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 ADD1P35611 737 aaKnown RBP12.67□□□□□ -0.38
PABPN1-203ENST00000553960 TMTC3Q6ZXV5 915 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 SLC44A5Q8NCS7 719 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 PNMA1Q8ND90 353 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 TMEM47Q9BQJ4 181 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 KAT14Q9H8E8 782 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 SH3GLB2Q9NR46 395 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 ZNF112Q9UJU3 913 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 PCDHAC2Q9Y5I4 1007 aa12.67□□□□□ -0.38
PABPN1-203ENST00000553960 MYH6P13533 1939 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 hCG_1984214I3L0E3 225 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 PLA2G6O60733 806 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 BAG4O95429 457 aaKnown RBP12.66□□□□□ -0.38
PABPN1-203ENST00000553960 PICALMQ13492 652 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 NFKBIBQ15653 356 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 KIF4BQ2VIQ3 1234 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 NBPF9Q3BBW0 867 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 CERKLQ49MI3 558 aaPredicted RBP12.66□□□□□ -0.38
PABPN1-203ENST00000553960 ASPRV1Q53RT3 343 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 FAM47AQ5JRC9 791 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 GPATCH4Q5T3I0 446 aaKnown RBP12.66□□□□□ -0.38
PABPN1-203ENST00000553960 NOL8Q76FK4 1167 aaKnown RBP12.66□□□□□ -0.38
PABPN1-203ENST00000553960 BRAPQ7Z569 592 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 MICU3Q86XE3 530 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 TRIM22Q8IYM9 498 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 ZNF713Q8N859 430 aaPredicted RBP12.66□□□□□ -0.38
PABPN1-203ENST00000553960 GMCL1P1Q8NEA9 526 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 CTCFLQ8NI51 663 aaPredicted RBP12.66□□□□□ -0.38
PABPN1-203ENST00000553960 CEP95Q96GE4 821 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 CSRNP1Q96S65 589 aa12.66□□□□□ -0.38
PABPN1-203ENST00000553960 LARP6Q9BRS8 491 aaKnown RBP12.66□□□□□ -0.38
PABPN1-203ENST00000553960 NCOA5Q9HCD5 579 aaKnown RBP12.66□□□□□ -0.38
PABPN1-203ENST00000553960 ORC3Q9UBD5 711 aaPredicted RBP12.66□□□□□ -0.38
PABPN1-203ENST00000553960 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
PABPN1-203ENST00000553960 WDR90Q96KV7 1748 aa12.65□□□□□ -0.38
PABPN1-203ENST00000553960 ELP1O95163 1332 aa12.65□□□□□ -0.38
PABPN1-203ENST00000553960 MYH4Q9Y623 1939 aa12.65□□□□□ -0.38
PABPN1-203ENST00000553960 JAK2O60674 1132 aa12.65□□□□□ -0.38
PABPN1-203ENST00000553960 U2AF2P26368 475 aaKnown RBP eCLIP12.65□□□□□ -0.38
PABPN1-203ENST00000553960 CCT2P78371 535 aaKnown RBP12.65□□□□□ -0.38
PABPN1-203ENST00000553960 SSRP1Q08945 709 aaKnown RBP12.65□□□□□ -0.38
PABPN1-203ENST00000553960 STK3Q13188 491 aa12.65□□□□□ -0.38
PABPN1-203ENST00000553960 PKP1Q13835 747 aa12.65□□□□□ -0.38
PABPN1-203ENST00000553960 GALNT17Q6IS24 598 aa12.65□□□□□ -0.38
PABPN1-203ENST00000553960 DPY19L2Q6NUT2 758 aa12.65□□□□□ -0.38
PABPN1-203ENST00000553960 FAM184AQ8NB25 1140 aa12.65□□□□□ -0.38
PABPN1-203ENST00000553960 GMCL1Q96IK5 515 aa12.65□□□□□ -0.38
PABPN1-203ENST00000553960 RIOX1Q9H6W3 641 aa12.65□□□□□ -0.38
PABPN1-203ENST00000553960 ADARB2Q9NS39 739 aaKnown RBP12.65□□□□□ -0.38
PABPN1-203ENST00000553960 UNCXA6NJT0 531 aa12.64□□□□□ -0.39
PABPN1-203ENST00000553960 PHF20L1A8MW92 1017 aa12.64□□□□□ -0.39
PABPN1-203ENST00000553960 AKR1B1P15121 316 aa12.64□□□□□ -0.39
PABPN1-203ENST00000553960 SKOR2Q2VWA4 1001 aaPredicted RBP12.64□□□□□ -0.39
PABPN1-203ENST00000553960 USP50Q70EL3 339 aaPredicted RBP12.64□□□□□ -0.39
PABPN1-203ENST00000553960 SIAH1Q8IUQ4 282 aa12.64□□□□□ -0.39
PABPN1-203ENST00000553960 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
PABPN1-203ENST00000553960 MTMR8Q96EF0 704 aa12.64□□□□□ -0.39
PABPN1-203ENST00000553960 ZKSCAN3Q9BRR0 538 aa12.64□□□□□ -0.39
PABPN1-203ENST00000553960 MAD2L2Q9UI95 211 aa12.64□□□□□ -0.39
PABPN1-203ENST00000553960 TCHHQ07283 1943 aa12.64□□□□□ -0.39
PABPN1-203ENST00000553960 CNTNAP5Q8WYK1 1306 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 GOLGA6L22H0YM25 854 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 NMT2O60551 498 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 CTNND1O60716 968 aaKnown RBP12.63□□□□□ -0.39
PABPN1-203ENST00000553960 ASNSP08243 561 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 PDHBP11177 359 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 GUCY1A2P33402 732 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 CAP2P40123 477 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 TCP10Q12799 353 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 RESTQ13127 1097 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 RASA3Q14644 834 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 PKN1Q16512 942 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 ABCB5Q2M3G0 1257 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 C9orf131Q5VYM1 1079 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 DCAF15Q66K64 600 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 BTNL9Q6UXG8 535 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 DCAF4Q8WV16 495 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 FOXP1Q9H334 677 aaPredicted RBP12.63□□□□□ -0.39
PABPN1-203ENST00000553960 RNF181Q9P0P0 153 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 TMX2Q9Y320 296 aa12.63□□□□□ -0.39
PABPN1-203ENST00000553960 MYH15Q9Y2K3 1946 aa12.62□□□□□ -0.39
PABPN1-203ENST00000553960 ESYT2A0FGR8 921 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms