RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 TACC3Q9Y6A5 838 aa22.12■■□□□ 1.13
DDX54-209ENST00000551912 IGF2BP3O00425 579 aaKnown RBP eCLIP22.11■■□□□ 1.13
DDX54-209ENST00000551912 BACE1P56817 501 aa22.11■■□□□ 1.13
DDX54-209ENST00000551912 TFAP4Q01664 338 aa22.11■■□□□ 1.13
DDX54-209ENST00000551912 ICA1Q05084 483 aa22.11■■□□□ 1.13
DDX54-209ENST00000551912 MTMR2Q13614 643 aa22.11■■□□□ 1.13
DDX54-209ENST00000551912 FAM47AQ5JRC9 791 aa22.11■■□□□ 1.13
DDX54-209ENST00000551912 FEZ1Q99689 392 aa22.11■■□□□ 1.13
DDX54-209ENST00000551912 PTPN18Q99952 460 aa22.11■■□□□ 1.13
DDX54-209ENST00000551912 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.11■■□□□ 1.13
DDX54-209ENST00000551912 RBM8AQ9Y5S9 174 aaKnown RBP22.11■■□□□ 1.13
DDX54-209ENST00000551912 TSPY2A6NKD2 308 aa22.1■■□□□ 1.13
DDX54-209ENST00000551912 C19orf81C9J6K1 198 aa22.1■■□□□ 1.13
DDX54-209ENST00000551912 CA12O43570 354 aa22.1■■□□□ 1.13
DDX54-209ENST00000551912 RANBP6O60518 1105 aaKnown RBP22.1■■□□□ 1.13
DDX54-209ENST00000551912 ALDH1A1P00352 501 aa22.1■■□□□ 1.13
DDX54-209ENST00000551912 HMGCS2P54868 508 aa22.1■■□□□ 1.13
DDX54-209ENST00000551912 MOGSQ13724 837 aa22.1■■□□□ 1.13
DDX54-209ENST00000551912 RRP12Q5JTH9 1297 aaKnown RBP22.1■■□□□ 1.13
DDX54-209ENST00000551912 GADL1Q6ZQY3 521 aa22.1■■□□□ 1.13
DDX54-209ENST00000551912 NEDD1Q8NHV4 660 aa22.1■■□□□ 1.13
DDX54-209ENST00000551912 PLIN4Q96Q06 1357 aa22.1■■□□□ 1.13
DDX54-209ENST00000551912 PTPRFP10586 1907 aa22.1■■□□□ 1.13
DDX54-209ENST00000551912 BTBD19C9JJ37 291 aa22.09■■□□□ 1.13
DDX54-209ENST00000551912 SH3D19Q5HYK7 790 aa22.09■■□□□ 1.13
DDX54-209ENST00000551912 CLEC10AQ8IUN9 316 aa22.09■■□□□ 1.13
DDX54-209ENST00000551912 ACER1Q8TDN7 264 aa22.09■■□□□ 1.13
DDX54-209ENST00000551912 ARHGEF10LQ9HCE6 1279 aa22.09■■□□□ 1.13
DDX54-209ENST00000551912 RNF186Q9NXI6 227 aa22.09■■□□□ 1.13
DDX54-209ENST00000551912 TMOD4Q9NZQ9 345 aa22.09■■□□□ 1.13
DDX54-209ENST00000551912 GREB1LQ9C091 1923 aaPredicted RBP22.08■■□□□ 1.13
DDX54-209ENST00000551912 TRPA1O75762 1119 aa22.08■■□□□ 1.13
DDX54-209ENST00000551912 CYP21A2P08686 494 aa22.08■■□□□ 1.13
DDX54-209ENST00000551912 HSPA1AP0DMV8 641 aaKnown RBP22.08■■□□□ 1.13
DDX54-209ENST00000551912 HSPA1BP0DMV9 641 aaKnown RBP22.08■■□□□ 1.13
DDX54-209ENST00000551912 NT5C2P49902 561 aa22.08■■□□□ 1.13
DDX54-209ENST00000551912 USP14P54578 494 aa22.08■■□□□ 1.13
DDX54-209ENST00000551912 USP17L2Q6R6M4 530 aa22.08■■□□□ 1.13
DDX54-209ENST00000551912 ANKRD23Q86SG2 305 aa22.08■■□□□ 1.13
DDX54-209ENST00000551912 FAM43AQ8N2R8 423 aa22.08■■□□□ 1.13
DDX54-209ENST00000551912 PROCA1Q8NCQ7 364 aaPredicted RBP22.08■■□□□ 1.13
DDX54-209ENST00000551912 KIAA1683Q9H0B3 1180 aa22.08■■□□□ 1.13
DDX54-209ENST00000551912 ZCCHC17Q9NP64 241 aaKnown RBP22.08■■□□□ 1.13
DDX54-209ENST00000551912 SAGE1Q9NXZ1 904 aa22.08■■□□□ 1.13
DDX54-209ENST00000551912 NEDD4P46934 1319 aa22.07■■□□□ 1.12
DDX54-209ENST00000551912 IGKV6D-41A0A0C4DH26 115 aa22.07■■□□□ 1.12
DDX54-209ENST00000551912 A0A1W2PRG0 241 aa22.07■■□□□ 1.12
DDX54-209ENST00000551912 EEF2P13639 858 aaKnown RBP22.07■■□□□ 1.12
DDX54-209ENST00000551912 ATP2B2Q01814 1243 aa22.07■■□□□ 1.12
DDX54-209ENST00000551912 ZYXQ15942 572 aaKnown RBP22.07■■□□□ 1.12
DDX54-209ENST00000551912 GPAT2Q6NUI2 795 aa22.07■■□□□ 1.12
DDX54-209ENST00000551912 SIAH1Q8IUQ4 282 aa22.07■■□□□ 1.12
DDX54-209ENST00000551912 ESR2Q92731 530 aa22.07■■□□□ 1.12
DDX54-209ENST00000551912 SH2D4AQ9H788 454 aa22.07■■□□□ 1.12
DDX54-209ENST00000551912 CNNM2Q9H8M5 875 aa22.07■■□□□ 1.12
DDX54-209ENST00000551912 REC8O95072 547 aa22.06■■□□□ 1.12
DDX54-209ENST00000551912 CEP95Q96GE4 821 aa22.06■■□□□ 1.12
DDX54-209ENST00000551912 KRT23Q9C075 422 aa22.06■■□□□ 1.12
DDX54-209ENST00000551912 EMILIN3Q9NT22 766 aa22.06■■□□□ 1.12
DDX54-209ENST00000551912 MTMR4Q9NYA4 1195 aa22.06■■□□□ 1.12
DDX54-209ENST00000551912 NYAP2Q9P242 653 aa22.06■■□□□ 1.12
DDX54-209ENST00000551912 AGTPBP1Q9UPW5 1226 aa22.06■■□□□ 1.12
DDX54-209ENST00000551912 PDHXO00330 501 aa22.05■■□□□ 1.12
DDX54-209ENST00000551912 DGKZQ13574 1117 aa22.05■■□□□ 1.12
DDX54-209ENST00000551912 NECTIN1Q15223 517 aa22.05■■□□□ 1.12
DDX54-209ENST00000551912 PPP4R3BQ5MIZ7 849 aa22.05■■□□□ 1.12
DDX54-209ENST00000551912 C12orf42Q96LP6 360 aa22.05■■□□□ 1.12
DDX54-209ENST00000551912 TMX2Q9Y320 296 aa22.05■■□□□ 1.12
DDX54-209ENST00000551912 TTLL1O95922 423 aa22.04■■□□□ 1.12
DDX54-209ENST00000551912 TRDNQ13061 729 aa22.04■■□□□ 1.12
DDX54-209ENST00000551912 TREML2Q5T2D2 321 aa22.04■■□□□ 1.12
DDX54-209ENST00000551912 RNF20Q5VTR2 975 aa22.04■■□□□ 1.12
DDX54-209ENST00000551912 CREB3L3Q68CJ9 461 aa22.04■■□□□ 1.12
DDX54-209ENST00000551912 CLIP2Q9UDT6 1046 aa22.04■■□□□ 1.12
DDX54-209ENST00000551912 SLC45A1Q9Y2W3 748 aa22.04■■□□□ 1.12
DDX54-209ENST00000551912 LOC285556D6RIA3 1793 aa22.04■■□□□ 1.12
DDX54-209ENST00000551912 B4E1Z4 1266 aa22.03■■□□□ 1.12
DDX54-209ENST00000551912 SLC27A2O14975 620 aa22.03■■□□□ 1.12
DDX54-209ENST00000551912 FOXN1O15353 648 aa22.03■■□□□ 1.12
DDX54-209ENST00000551912 KDM4AO75164 1064 aa22.03■■□□□ 1.12
DDX54-209ENST00000551912 PABPC4Q13310 644 aaKnown RBP eCLIP22.03■■□□□ 1.125e-7■□□□□ 9.7
DDX54-209ENST00000551912 TAF1CQ15572 869 aaPredicted RBP22.03■■□□□ 1.12
DDX54-209ENST00000551912 CFHR5Q9BXR6 569 aa22.03■■□□□ 1.12
DDX54-209ENST00000551912 IL17RBQ9NRM6 502 aa22.03■■□□□ 1.12
DDX54-209ENST00000551912 TCP11L1Q9NUJ3 509 aa22.03■■□□□ 1.12
DDX54-209ENST00000551912 TAF6LQ9Y6J9 622 aa22.03■■□□□ 1.12
DDX54-209ENST00000551912 E7EWF7 191 aa22.02■■□□□ 1.12
DDX54-209ENST00000551912 NMT2O60551 498 aa22.02■■□□□ 1.12
DDX54-209ENST00000551912 TBC1D8O95759 1140 aa22.02■■□□□ 1.12
DDX54-209ENST00000551912 CRHR2Q13324 411 aa22.02■■□□□ 1.12
DDX54-209ENST00000551912 NKX2-3Q8TAU0 364 aa22.02■■□□□ 1.12
DDX54-209ENST00000551912 LPAR1Q92633 364 aa22.02■■□□□ 1.12
DDX54-209ENST00000551912 MKL1Q969V6 931 aa22.02■■□□□ 1.12
DDX54-209ENST00000551912 PARK7Q99497 189 aaKnown RBP22.02■■□□□ 1.12
DDX54-209ENST00000551912 VCPKMTQ9H867 229 aa22.02■■□□□ 1.12
DDX54-209ENST00000551912 ZFYVE28Q9HCC9 887 aa22.02■■□□□ 1.12
DDX54-209ENST00000551912 GOPCQ9HD26 462 aa22.02■■□□□ 1.12
DDX54-209ENST00000551912 TSKSQ9UJT2 592 aa22.02■■□□□ 1.12
DDX54-209ENST00000551912 STX8Q9UNK0 236 aa22.02■■□□□ 1.12
DDX54-209ENST00000551912 VCAM1P19320 739 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms