RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 MINDY4BA8MYZ0 360 aa20.66■□□□□ 0.9
CDK4-208ENST00000551706 GH2P01242 217 aa20.66■□□□□ 0.9
CDK4-208ENST00000551706 EVX2Q03828 476 aa20.66■□□□□ 0.9
CDK4-208ENST00000551706 CWC27Q6UX04 472 aaKnown RBP20.66■□□□□ 0.9
CDK4-208ENST00000551706 PRRT2Q7Z6L0 340 aaPredicted RBP20.66■□□□□ 0.9
CDK4-208ENST00000551706 SH3TC2Q8TF17 1288 aa20.66■□□□□ 0.9
CDK4-208ENST00000551706 DYNLL2Q96FJ2 89 aa20.66■□□□□ 0.9
CDK4-208ENST00000551706 CCDC17Q96LX7 622 aa20.66■□□□□ 0.9
CDK4-208ENST00000551706 WDR18Q9BV38 432 aa20.66■□□□□ 0.9
CDK4-208ENST00000551706 ZNF287Q9HBT7 754 aa20.66■□□□□ 0.9
CDK4-208ENST00000551706 ZFYVE28Q9HCC9 887 aa20.66■□□□□ 0.9
CDK4-208ENST00000551706 ROBO3Q96MS0 1386 aa20.65■□□□□ 0.9
CDK4-208ENST00000551706 TRIM75PA6NK02 468 aa20.65■□□□□ 0.9
CDK4-208ENST00000551706 SLC3A2P08195 630 aaKnown RBP20.65■□□□□ 0.9
CDK4-208ENST00000551706 CDK8P49336 464 aa20.65■□□□□ 0.9
CDK4-208ENST00000551706 SPP2Q13103 211 aa20.65■□□□□ 0.9
CDK4-208ENST00000551706 TAF1CQ15572 869 aaPredicted RBP20.65■□□□□ 0.9
CDK4-208ENST00000551706 ALX1Q15699 326 aa20.65■□□□□ 0.9
CDK4-208ENST00000551706 SLC44A5Q8NCS7 719 aa20.65■□□□□ 0.9
CDK4-208ENST00000551706 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.65■□□□□ 0.9
CDK4-208ENST00000551706 JAG1P78504 1218 aa20.64■□□□□ 0.89
CDK4-208ENST00000551706 ANKRD23Q86SG2 305 aa20.64■□□□□ 0.89
CDK4-208ENST00000551706 ZNF589Q86UQ0 364 aaPredicted RBP20.64■□□□□ 0.89
CDK4-208ENST00000551706 CCDC84Q86UT8 332 aaPredicted RBP20.64■□□□□ 0.89
CDK4-208ENST00000551706 RUFY2Q8WXA3 655 aa20.64■□□□□ 0.89
CDK4-208ENST00000551706 BAZ2AQ9UIF9 1905 aaKnown RBP20.63■□□□□ 0.89
CDK4-208ENST00000551706 ZMYM6O95789 1325 aa20.63■□□□□ 0.89
CDK4-208ENST00000551706 BTBD19C9JJ37 291 aa20.63■□□□□ 0.89
CDK4-208ENST00000551706 MPHOSPH10O00566 681 aaKnown RBP20.63■□□□□ 0.89
CDK4-208ENST00000551706 FOXP2O15409 715 aa20.63■□□□□ 0.89
CDK4-208ENST00000551706 HSPD1P10809 573 aaKnown RBP20.63■□□□□ 0.89
CDK4-208ENST00000551706 RAB3GAP1Q15042 981 aa20.63■□□□□ 0.89
CDK4-208ENST00000551706 VPS53Q5VIR6 699 aa20.63■□□□□ 0.89
CDK4-208ENST00000551706 TMEM179Q6ZVK1 233 aa20.63■□□□□ 0.89
CDK4-208ENST00000551706 FAM43AQ8N2R8 423 aa20.63■□□□□ 0.89
CDK4-208ENST00000551706 PRO3102Q9H379 93 aa20.63■□□□□ 0.89
CDK4-208ENST00000551706 MKNK2Q9HBH9 465 aa20.63■□□□□ 0.89
CDK4-208ENST00000551706 RAD50Q92878 1312 aa20.62■□□□□ 0.89
CDK4-208ENST00000551706 PPARAQ07869 468 aa20.62■□□□□ 0.89
CDK4-208ENST00000551706 MOGSQ13724 837 aa20.62■□□□□ 0.89
CDK4-208ENST00000551706 SHROOM1Q2M3G4 852 aaPredicted RBP20.62■□□□□ 0.89
CDK4-208ENST00000551706 BMP2KLQ5H9B9 411 aa20.62■□□□□ 0.89
CDK4-208ENST00000551706 C19orf81C9J6K1 198 aa20.61■□□□□ 0.89
CDK4-208ENST00000551706 USP17L10C9JJH3 530 aa20.61■□□□□ 0.89
CDK4-208ENST00000551706 SMIM22K7EJ46 135 aa20.61■□□□□ 0.89
CDK4-208ENST00000551706 CHMLP26374 656 aa20.61■□□□□ 0.89
CDK4-208ENST00000551706 BACE1P56817 501 aa20.61■□□□□ 0.89
CDK4-208ENST00000551706 PDE4BQ07343 736 aa20.61■□□□□ 0.89
CDK4-208ENST00000551706 KIF22Q14807 665 aa20.61■□□□□ 0.89
CDK4-208ENST00000551706 SH3D19Q5HYK7 790 aa20.61■□□□□ 0.89
CDK4-208ENST00000551706 GADL1Q6ZQY3 521 aa20.61■□□□□ 0.89
CDK4-208ENST00000551706 PROCA1Q8NCQ7 364 aaPredicted RBP20.61■□□□□ 0.89
CDK4-208ENST00000551706 SHISA4Q96DD7 197 aa20.61■□□□□ 0.89
CDK4-208ENST00000551706 SLC45A1Q9Y2W3 748 aa20.61■□□□□ 0.89
CDK4-208ENST00000551706 ATAD5Q96QE3 1844 aa20.6■□□□□ 0.89
CDK4-208ENST00000551706 FGAP02671 866 aa20.6■□□□□ 0.89
CDK4-208ENST00000551706 MNX1P50219 401 aaPredicted RBP20.6■□□□□ 0.89
CDK4-208ENST00000551706 MTMR2Q13614 643 aa20.6■□□□□ 0.89
CDK4-208ENST00000551706 HTATIP2Q9BUP3 242 aa20.6■□□□□ 0.89
CDK4-208ENST00000551706 TMOD4Q9NZQ9 345 aa20.6■□□□□ 0.89
CDK4-208ENST00000551706 ANAPC4Q9UJX5 808 aa20.6■□□□□ 0.89
CDK4-208ENST00000551706 PDHXO00330 501 aa20.59■□□□□ 0.89
CDK4-208ENST00000551706 GNRH1P01148 92 aa20.59■□□□□ 0.89
CDK4-208ENST00000551706 AKR1B1P15121 316 aa20.59■□□□□ 0.89
CDK4-208ENST00000551706 USP14P54578 494 aa20.59■□□□□ 0.89
CDK4-208ENST00000551706 HMGCS2P54868 508 aa20.59■□□□□ 0.89
CDK4-208ENST00000551706 PABPC4Q13310 644 aaKnown RBP eCLIP20.59■□□□□ 0.894e-12■■■□□ 17.5
CDK4-208ENST00000551706 SEPT2Q15019 361 aa20.59■□□□□ 0.89
CDK4-208ENST00000551706 GPAT2Q6NUI2 795 aa20.59■□□□□ 0.89
CDK4-208ENST00000551706 ZNF444Q8N0Y2 327 aaPredicted RBP20.59■□□□□ 0.89
CDK4-208ENST00000551706 NKX2-3Q8TAU0 364 aa20.59■□□□□ 0.89
CDK4-208ENST00000551706 FEZ1Q99689 392 aa20.59■□□□□ 0.89
CDK4-208ENST00000551706 DSCC1Q9BVC3 393 aa20.59■□□□□ 0.89
CDK4-208ENST00000551706 ARHGAP39Q9C0H5 1083 aa20.59■□□□□ 0.89
CDK4-208ENST00000551706 AGTPBP1Q9UPW5 1226 aa20.59■□□□□ 0.89
CDK4-208ENST00000551706 PHIPQ8WWQ0 1821 aa20.59■□□□□ 0.89
CDK4-208ENST00000551706 RASA1P20936 1047 aa20.58■□□□□ 0.89
CDK4-208ENST00000551706 GUCY1A2P33402 732 aa20.58■□□□□ 0.89
CDK4-208ENST00000551706 PRMT2P55345 433 aa20.58■□□□□ 0.89
CDK4-208ENST00000551706 LACTBP83111 547 aaPredicted RBP20.58■□□□□ 0.89
CDK4-208ENST00000551706 MTFR1Q15390 333 aa20.58■□□□□ 0.89
CDK4-208ENST00000551706 SKAP1Q86WV1 359 aa20.58■□□□□ 0.89
CDK4-208ENST00000551706 PARK7Q99497 189 aaKnown RBP20.58■□□□□ 0.89
CDK4-208ENST00000551706 KIAA1683Q9H0B3 1180 aa20.58■□□□□ 0.89
CDK4-208ENST00000551706 NR2E3Q9Y5X4 410 aa20.58■□□□□ 0.89
CDK4-208ENST00000551706 ZSWIM8A7E2V4 1837 aa20.57■□□□□ 0.88
CDK4-208ENST00000551706 A0A1W2PPC1 479 aa20.57■□□□□ 0.88
CDK4-208ENST00000551706 TLR2O60603 784 aa20.57■□□□□ 0.88
CDK4-208ENST00000551706 USP17L2Q6R6M4 530 aa20.57■□□□□ 0.88
CDK4-208ENST00000551706 STK11IPQ8N1F8 1099 aa20.57■□□□□ 0.88
CDK4-208ENST00000551706 SH2D4AQ9H788 454 aa20.57■□□□□ 0.88
CDK4-208ENST00000551706 KANSL2Q9H9L4 492 aa20.57■□□□□ 0.88
CDK4-208ENST00000551706 PNMA3Q9UL41 463 aa20.57■□□□□ 0.88
CDK4-208ENST00000551706 PCP11498 1178 aaKnown RBP20.56■□□□□ 0.88
CDK4-208ENST00000551706 ICA1Q05084 483 aa20.56■□□□□ 0.88
CDK4-208ENST00000551706 C12orf42Q96LP6 360 aa20.56■□□□□ 0.88
CDK4-208ENST00000551706 ARHGEF10LQ9HCE6 1279 aa20.56■□□□□ 0.88
CDK4-208ENST00000551706 CTNNA3Q9UI47 895 aa20.56■□□□□ 0.88
CDK4-208ENST00000551706 LAMA3Q16787 3333 aa20.55■□□□□ 0.88
CDK4-208ENST00000551706 UBE2Q1Q7Z7E8 422 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms